RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
CHRNB1-205ENST00000573209 RANGAP1P46060 587 aaPredicted RBP14.88□□□□□ -0.03
CHRNB1-205ENST00000573209 PDE4CQ08493 712 aa14.88□□□□□ -0.03
CHRNB1-205ENST00000573209 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
CHRNB1-205ENST00000573209 PDIA4P13667 645 aaKnown RBP14.86□□□□□ -0.03
CHRNB1-205ENST00000573209 MIER1Q8N108 512 aa14.84□□□□□ -0.03
CHRNB1-205ENST00000573209 ERICH3Q5RHP9 1530 aa14.84□□□□□ -0.03
CHRNB1-205ENST00000573209 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
CHRNB1-205ENST00000573209 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
CHRNB1-205ENST00000573209 FGD1P98174 961 aa14.77□□□□□ -0.04
CHRNB1-205ENST00000573209 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
CHRNB1-205ENST00000573209 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
CHRNB1-205ENST00000573209 ZMYND15Q9H091 742 aa14.75□□□□□ -0.05
CHRNB1-205ENST00000573209 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
CHRNB1-205ENST00000573209 KLHL34Q8N239 644 aa14.71□□□□□ -0.05
CHRNB1-205ENST00000573209 TIMELESSQ9UNS1 1208 aa14.69□□□□□ -0.06
CHRNB1-205ENST00000573209 ARAP1Q96P48 1450 aa14.68□□□□□ -0.06
CHRNB1-205ENST00000573209 AAMPQ13685 434 aa14.67□□□□□ -0.06
CHRNB1-205ENST00000573209 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
CHRNB1-205ENST00000573209 CUX1P39880 1505 aa14.65□□□□□ -0.06
CHRNB1-205ENST00000573209 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
CHRNB1-205ENST00000573209 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
CHRNB1-205ENST00000573209 NESP48681 1621 aa14.62□□□□□ -0.07
CHRNB1-205ENST00000573209 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
CHRNB1-205ENST00000573209 KIF27Q86VH2 1401 aa14.61□□□□□ -0.07
CHRNB1-205ENST00000573209 TAF7LQ5H9L4 462 aa14.6□□□□□ -0.07
CHRNB1-205ENST00000573209 RRBP1Q9P2E9 1410 aaKnown RBP14.59□□□□□ -0.07
CHRNB1-205ENST00000573209 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
CHRNB1-205ENST00000573209 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
CHRNB1-205ENST00000573209 CUX2O14529 1486 aa14.59□□□□□ -0.07
CHRNB1-205ENST00000573209 CFTRP13569 1480 aa14.59□□□□□ -0.07
CHRNB1-205ENST00000573209 C11orf95C9JLR9 678 aaPredicted RBP14.57□□□□□ -0.08
CHRNB1-205ENST00000573209 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
CHRNB1-205ENST00000573209 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
CHRNB1-205ENST00000573209 BCANQ96GW7 911 aa14.56□□□□□ -0.08
CHRNB1-205ENST00000573209 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
CHRNB1-205ENST00000573209 MAP3K1Q13233 1512 aa14.52□□□□□ -0.09
CHRNB1-205ENST00000573209 FKBP8Q14318 412 aa14.52□□□□□ -0.09
CHRNB1-205ENST00000573209 ARHGAP35Q9NRY4 1499 aa14.52□□□□□ -0.09
CHRNB1-205ENST00000573209 NBR1Q14596 966 aa14.49□□□□□ -0.09
CHRNB1-205ENST00000573209 NOP58Q9Y2X3 529 aaKnown RBP14.48□□□□□ -0.09
CHRNB1-205ENST00000573209 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
CHRNB1-205ENST00000573209 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
CHRNB1-205ENST00000573209 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
CHRNB1-205ENST00000573209 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.1
CHRNB1-205ENST00000573209 KANK4Q5T7N3 995 aaPredicted RBP14.45□□□□□ -0.1
CHRNB1-205ENST00000573209 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
CHRNB1-205ENST00000573209 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
CHRNB1-205ENST00000573209 HOMEZQ8IX15 550 aa14.4□□□□□ -0.1
CHRNB1-205ENST00000573209 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
CHRNB1-205ENST00000573209 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
CHRNB1-205ENST00000573209 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CHRNB1-205ENST00000573209 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
CHRNB1-205ENST00000573209 WASHC2AQ641Q2 1341 aa14.36□□□□□ -0.11
CHRNB1-205ENST00000573209 IGF1RP08069 1367 aa14.36□□□□□ -0.11
CHRNB1-205ENST00000573209 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
CHRNB1-205ENST00000573209 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
CHRNB1-205ENST00000573209 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
CHRNB1-205ENST00000573209 LRRC9Q6ZRR7 1453 aa14.35□□□□□ -0.11
CHRNB1-205ENST00000573209 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
CHRNB1-205ENST00000573209 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.12
CHRNB1-205ENST00000573209 RRP9O43818 475 aaKnown RBP14.33□□□□□ -0.12
CHRNB1-205ENST00000573209 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.12
CHRNB1-205ENST00000573209 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
CHRNB1-205ENST00000573209 ITGAEP38570 1179 aa14.32□□□□□ -0.12
CHRNB1-205ENST00000573209 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
CHRNB1-205ENST00000573209 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
CHRNB1-205ENST00000573209 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
CHRNB1-205ENST00000573209 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
CHRNB1-205ENST00000573209 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
CHRNB1-205ENST00000573209 CUL7Q14999 1698 aa14.31□□□□□ -0.12
CHRNB1-205ENST00000573209 USP35Q9P2H5 1018 aa14.3□□□□□ -0.12
CHRNB1-205ENST00000573209 RSPH4AQ5TD94 716 aa14.29□□□□□ -0.12
CHRNB1-205ENST00000573209 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
CHRNB1-205ENST00000573209 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
CHRNB1-205ENST00000573209 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
CHRNB1-205ENST00000573209 FYCO1Q9BQS8 1478 aa14.28□□□□□ -0.12
CHRNB1-205ENST00000573209 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHRNB1-205ENST00000573209 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
CHRNB1-205ENST00000573209 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
CHRNB1-205ENST00000573209 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
CHRNB1-205ENST00000573209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHRNB1-205ENST00000573209 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
CHRNB1-205ENST00000573209 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
CHRNB1-205ENST00000573209 PHLDB1Q86UU1 1377 aa14.23□□□□□ -0.13
CHRNB1-205ENST00000573209 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
CHRNB1-205ENST00000573209 CASKIN1Q8WXD9 1431 aa14.2□□□□□ -0.14
CHRNB1-205ENST00000573209 THOC2Q8NI27 1593 aaKnown RBP14.2□□□□□ -0.14
CHRNB1-205ENST00000573209 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
CHRNB1-205ENST00000573209 NEFMP07197 916 aa14.19□□□□□ -0.14
CHRNB1-205ENST00000573209 NAP1L5Q96NT1 182 aaPredicted RBP14.19□□□□□ -0.14
CHRNB1-205ENST00000573209 PAXIP1Q6ZW49 1069 aaPredicted RBP14.18□□□□□ -0.14
CHRNB1-205ENST00000573209 NAP1L2Q9ULW6 460 aaPredicted RBP14.18□□□□□ -0.14
CHRNB1-205ENST00000573209 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
CHRNB1-205ENST00000573209 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
CHRNB1-205ENST00000573209 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
CHRNB1-205ENST00000573209 KCNA4P22459 653 aa14.15□□□□□ -0.14
CHRNB1-205ENST00000573209 SAMD9Q5K651 1589 aa14.15□□□□□ -0.14
CHRNB1-205ENST00000573209 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
CHRNB1-205ENST00000573209 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms