RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 TDRD9Q8NDG6 1382 aaKnown RBP7.37□□□□□ -1.23
NDE1-204ENST00000572503 EIF4G3O43432 1585 aaKnown RBP7.37□□□□□ -1.23
NDE1-204ENST00000572503 TRIM26Q12899 539 aaPredicted RBP7.36□□□□□ -1.23
NDE1-204ENST00000572503 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
NDE1-204ENST00000572503 SAMD9Q5K651 1589 aa7.35□□□□□ -1.23
NDE1-204ENST00000572503 EFCAB5A4FU69 1503 aa7.35□□□□□ -1.23
NDE1-204ENST00000572503 ERCC6Q03468 1493 aa7.35□□□□□ -1.23
NDE1-204ENST00000572503 GRIN2BQ13224 1484 aa7.35□□□□□ -1.23
NDE1-204ENST00000572503 AQRO60306 1485 aaKnown RBP eCLIP7.34□□□□□ -1.23
NDE1-204ENST00000572503 FHAD1B1AJZ9 1412 aa7.34□□□□□ -1.23
NDE1-204ENST00000572503 PCGF6Q9BYE7 350 aa7.33□□□□□ -1.24
NDE1-204ENST00000572503 MAP3K1Q13233 1512 aa7.32□□□□□ -1.24
NDE1-204ENST00000572503 CFAP43Q8NDM7 1665 aa7.31□□□□□ -1.24
NDE1-204ENST00000572503 SNAPC4Q5SXM2 1469 aa7.3□□□□□ -1.24
NDE1-204ENST00000572503 MAGI1Q96QZ7 1491 aaPredicted RBP7.3□□□□□ -1.24
NDE1-204ENST00000572503 PCF11O94913 1555 aaKnown RBP7.29□□□□□ -1.24
NDE1-204ENST00000572503 IQGAP2Q13576 1575 aa7.29□□□□□ -1.24
NDE1-204ENST00000572503 UGGT2Q9NYU1 1516 aa7.28□□□□□ -1.24
NDE1-204ENST00000572503 LRRIQ1Q96JM4 1722 aa7.28□□□□□ -1.24
NDE1-204ENST00000572503 TIAM1Q13009 1591 aa7.28□□□□□ -1.24
NDE1-204ENST00000572503 GRIN2AQ12879 1464 aa7.27□□□□□ -1.25
NDE1-204ENST00000572503 CEP170Q5SW79 1584 aa7.26□□□□□ -1.25
NDE1-204ENST00000572503 SYNJ2O15056 1496 aa7.26□□□□□ -1.25
NDE1-204ENST00000572503 FYCO1Q9BQS8 1478 aa7.26□□□□□ -1.25
NDE1-204ENST00000572503 FHOD3Q2V2M9 1422 aa7.26□□□□□ -1.25
NDE1-204ENST00000572503 CASKIN1Q8WXD9 1431 aa7.26□□□□□ -1.25
NDE1-204ENST00000572503 KIAA0586Q9BVV6 1533 aa7.25□□□□□ -1.25
NDE1-204ENST00000572503 NUP160Q12769 1436 aa7.25□□□□□ -1.25
NDE1-204ENST00000572503 HRCP23327 699 aa7.24□□□□□ -1.25
NDE1-204ENST00000572503 PPARGC1BQ86YN6 1023 aaKnown RBP7.24□□□□□ -1.25
NDE1-204ENST00000572503 DISP1Q96F81 1524 aa7.23□□□□□ -1.25
NDE1-204ENST00000572503 KIAA0556O60303 1618 aa7.23□□□□□ -1.25
NDE1-204ENST00000572503 FMN1Q68DA7 1419 aa7.22□□□□□ -1.25
NDE1-204ENST00000572503 RRBP1Q9P2E9 1410 aaKnown RBP7.22□□□□□ -1.25
NDE1-204ENST00000572503 LRRC9Q6ZRR7 1453 aa7.22□□□□□ -1.25
NDE1-204ENST00000572503 CHD1O14646 1710 aa7.21□□□□□ -1.25
NDE1-204ENST00000572503 RANGAP1P46060 587 aaPredicted RBP7.21□□□□□ -1.26
NDE1-204ENST00000572503 KANK4Q5T7N3 995 aaPredicted RBP7.21□□□□□ -1.26
NDE1-204ENST00000572503 SHROOM2Q13796 1616 aa7.19□□□□□ -1.26
NDE1-204ENST00000572503 HECW1Q76N89 1606 aa7.19□□□□□ -1.26
NDE1-204ENST00000572503 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
NDE1-204ENST00000572503 MAGI3Q5TCQ9 1506 aa7.17□□□□□ -1.26
NDE1-204ENST00000572503 P3H3Q8IVL6 736 aa7.16□□□□□ -1.26
NDE1-204ENST00000572503 CCDC18Q5T9S5 1454 aa7.16□□□□□ -1.26
NDE1-204ENST00000572503 EHBP1L1Q8N3D4 1523 aa7.16□□□□□ -1.26
NDE1-204ENST00000572503 RAPGEF6Q8TEU7 1601 aa7.16□□□□□ -1.26
NDE1-204ENST00000572503 APLP2Q06481 763 aa7.15□□□□□ -1.26
NDE1-204ENST00000572503 EPRSP07814 1512 aaKnown RBP7.15□□□□□ -1.27
NDE1-204ENST00000572503 CLASP1Q7Z460 1538 aa7.15□□□□□ -1.27
NDE1-204ENST00000572503 ABCA8O94911 1581 aa7.14□□□□□ -1.27
NDE1-204ENST00000572503 NUP153P49790 1475 aaKnown RBP7.14□□□□□ -1.27
NDE1-204ENST00000572503 TTBK1Q5TCY1 1321 aaPredicted RBP7.14□□□□□ -1.27
NDE1-204ENST00000572503 SUPT6HQ7KZ85 1726 aaKnown RBP7.14□□□□□ -1.27
NDE1-204ENST00000572503 PHLDB1Q86UU1 1377 aa7.14□□□□□ -1.27
NDE1-204ENST00000572503 CCNB3Q8WWL7 1395 aa7.13□□□□□ -1.27
NDE1-204ENST00000572503 CDK13Q14004 1512 aaKnown RBP7.12□□□□□ -1.27
NDE1-204ENST00000572503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.12□□□□□ -1.27
NDE1-204ENST00000572503 CHMP7Q8WUX9 453 aaPredicted RBP7.12□□□□□ -1.27
NDE1-204ENST00000572503 ADCY10Q96PN6 1610 aa7.12□□□□□ -1.27
NDE1-204ENST00000572503 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
NDE1-204ENST00000572503 CARMIL2Q6F5E8 1435 aa7.1□□□□□ -1.27
NDE1-204ENST00000572503 FGD6Q6ZV73 1430 aa7.1□□□□□ -1.27
NDE1-204ENST00000572503 JPH4Q96JJ6 628 aa7.09□□□□□ -1.27
NDE1-204ENST00000572503 TCOF1Q13428 1488 aaKnown RBP7.09□□□□□ -1.27
NDE1-204ENST00000572503 PLB1Q6P1J6 1458 aa7.09□□□□□ -1.27
NDE1-204ENST00000572503 ERCC6L2Q5T890 1561 aa7.08□□□□□ -1.28
NDE1-204ENST00000572503 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
NDE1-204ENST00000572503 MYOM3Q5VTT5 1437 aa7.08□□□□□ -1.28
NDE1-204ENST00000572503 MTUS2Q5JR59 1369 aa7.08□□□□□ -1.28
NDE1-204ENST00000572503 RNF39Q9H2S5 420 aa7.07□□□□□ -1.28
NDE1-204ENST00000572503 PTPN23Q9H3S7 1636 aa7.07□□□□□ -1.28
NDE1-204ENST00000572503 PRG4Q92954 1404 aaPredicted RBP7.07□□□□□ -1.28
NDE1-204ENST00000572503 KIF14Q15058 1648 aa7.05□□□□□ -1.28
NDE1-204ENST00000572503 TROQ12816 1431 aaPredicted RBP7.05□□□□□ -1.28
NDE1-204ENST00000572503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.05□□□□□ -1.28
NDE1-204ENST00000572503 HNRNPUL2Q1KMD3 747 aaKnown RBP7.05□□□□□ -1.28
NDE1-204ENST00000572503 ATP10BO94823 1461 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 PTPRKQ15262 1439 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 FBLN2P98095 1184 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 ABCC10Q5T3U5 1492 aa7.04□□□□□ -1.28
NDE1-204ENST00000572503 GCC2Q8IWJ2 1684 aa7.03□□□□□ -1.28
NDE1-204ENST00000572503 ITSN2Q9NZM3 1697 aa7.03□□□□□ -1.28
NDE1-204ENST00000572503 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
NDE1-204ENST00000572503 DHX57Q6P158 1386 aaKnown RBP7.03□□□□□ -1.28
NDE1-204ENST00000572503 AKNAQ7Z591 1439 aa7.02□□□□□ -1.29
NDE1-204ENST00000572503 DNMT1P26358 1616 aaKnown RBP7.02□□□□□ -1.29
NDE1-204ENST00000572503 ATP1B4Q9UN42 357 aaPredicted RBP7.02□□□□□ -1.29
NDE1-204ENST00000572503 UHRF1BP1LA0JNW5 1464 aa7.02□□□□□ -1.29
NDE1-204ENST00000572503 PTPRGP23470 1445 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 MAPKBP1O60336 1514 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 UACAQ9BZF9 1416 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 CLSPNQ9HAW4 1339 aa7.01□□□□□ -1.29
NDE1-204ENST00000572503 RAB3GAP2Q9H2M9 1393 aa7□□□□□ -1.29
NDE1-204ENST00000572503 CCER1Q8TC90 406 aaPredicted RBP7□□□□□ -1.29
NDE1-204ENST00000572503 PPP6R1Q9UPN7 881 aa7□□□□□ -1.29
NDE1-204ENST00000572503 GPATCH8Q9UKJ3 1502 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms