RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 IGF1RP08069 1367 aa27.19■■□□□ 1.94
TSR1-202ENST00000571806 CUL7Q14999 1698 aa27.17■■□□□ 1.94
TSR1-202ENST00000571806 KIAA0586Q9BVV6 1533 aa27.15■■□□□ 1.94
TSR1-202ENST00000571806 NPM1P06748 294 aaKnown RBP eCLIP27.13■■□□□ 1.93
TSR1-202ENST00000571806 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
TSR1-202ENST00000571806 KIF13AQ9H1H9 1805 aa27.06■■□□□ 1.92
TSR1-202ENST00000571806 MAPKBP1O60336 1514 aa27.02■■□□□ 1.92
TSR1-202ENST00000571806 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
TSR1-202ENST00000571806 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
TSR1-202ENST00000571806 ADCY10Q96PN6 1610 aa26.98■■□□□ 1.91
TSR1-202ENST00000571806 FAM69CQ0P6D2 419 aa26.97■■□□□ 1.91
TSR1-202ENST00000571806 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
TSR1-202ENST00000571806 PTPRGP23470 1445 aa26.9■■□□□ 1.9
TSR1-202ENST00000571806 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
TSR1-202ENST00000571806 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
TSR1-202ENST00000571806 IQGAP2Q13576 1575 aa26.85■■□□□ 1.89
TSR1-202ENST00000571806 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
TSR1-202ENST00000571806 ABCC2Q92887 1545 aa26.76■■□□□ 1.87
TSR1-202ENST00000571806 TTBK1Q5TCY1 1321 aaPredicted RBP26.73■■□□□ 1.87
TSR1-202ENST00000571806 UHRF1BP1LA0JNW5 1464 aa26.73■■□□□ 1.87
TSR1-202ENST00000571806 DISP1Q96F81 1524 aa26.7■■□□□ 1.87
TSR1-202ENST00000571806 PLB1Q6P1J6 1458 aa26.7■■□□□ 1.87
TSR1-202ENST00000571806 UACAQ9BZF9 1416 aa26.7■■□□□ 1.86
TSR1-202ENST00000571806 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.86
TSR1-202ENST00000571806 KDM6BO15054 1643 aa26.69■■□□□ 1.86
TSR1-202ENST00000571806 TSPOAP1O95153 1857 aa26.66■■□□□ 1.86
TSR1-202ENST00000571806 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
TSR1-202ENST00000571806 GLI2P10070 1586 aa26.63■■□□□ 1.85
TSR1-202ENST00000571806 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
TSR1-202ENST00000571806 KIAA0556O60303 1618 aa26.59■■□□□ 1.85
TSR1-202ENST00000571806 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
TSR1-202ENST00000571806 GOLGA3Q08378 1498 aa26.53■■□□□ 1.84
TSR1-202ENST00000571806 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
TSR1-202ENST00000571806 ZCCHC11Q5TAX3 1644 aaKnown RBP26.5■■□□□ 1.83
TSR1-202ENST00000571806 PPRC1Q5VV67 1664 aaKnown RBP26.48■■□□□ 1.83
TSR1-202ENST00000571806 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
TSR1-202ENST00000571806 TEX14Q8IWB6 1497 aa26.45■■□□□ 1.82
TSR1-202ENST00000571806 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.82
TSR1-202ENST00000571806 KDM4FA0A1W2PPD8 638 aa26.42■■□□□ 1.82
TSR1-202ENST00000571806 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
TSR1-202ENST00000571806 WDR7Q9Y4E6 1490 aa26.41■■□□□ 1.82
TSR1-202ENST00000571806 ABCA8O94911 1581 aa26.36■■□□□ 1.81
TSR1-202ENST00000571806 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
TSR1-202ENST00000571806 CSRNP3Q8WYN3 585 aa26.27■■□□□ 1.8
TSR1-202ENST00000571806 CD109Q6YHK3 1445 aa26.27■■□□□ 1.8
TSR1-202ENST00000571806 CFAP43Q8NDM7 1665 aa26.27■■□□□ 1.8
TSR1-202ENST00000571806 MAGI3Q5TCQ9 1506 aa26.26■■□□□ 1.79
TSR1-202ENST00000571806 KCNH8Q96L42 1107 aa26.24■■□□□ 1.79
TSR1-202ENST00000571806 ADGRL1O94910 1474 aa26.2■■□□□ 1.78
TSR1-202ENST00000571806 EEA1Q15075 1411 aa26.2■■□□□ 1.78
TSR1-202ENST00000571806 P3H3Q8IVL6 736 aa26.15■■□□□ 1.78
TSR1-202ENST00000571806 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
TSR1-202ENST00000571806 ATP10BO94823 1461 aa26.14■■□□□ 1.78
TSR1-202ENST00000571806 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
TSR1-202ENST00000571806 RAPGEF6Q8TEU7 1601 aa26.07■■□□□ 1.76
TSR1-202ENST00000571806 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
TSR1-202ENST00000571806 ABCA9Q8IUA7 1624 aa26.05■■□□□ 1.76
TSR1-202ENST00000571806 ARID3CA6NKF2 412 aa26.04■■□□□ 1.76
TSR1-202ENST00000571806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
TSR1-202ENST00000571806 HNRNPUL2Q1KMD3 747 aaKnown RBP26.01■■□□□ 1.75
TSR1-202ENST00000571806 NEO1Q92859 1461 aa25.96■■□□□ 1.75
TSR1-202ENST00000571806 NUP153P49790 1475 aaKnown RBP25.95■■□□□ 1.74
TSR1-202ENST00000571806 EFCAB5A4FU69 1503 aa25.93■■□□□ 1.74
TSR1-202ENST00000571806 KIF21BO75037 1637 aa25.92■■□□□ 1.74
TSR1-202ENST00000571806 FHOD3Q2V2M9 1422 aa25.92■■□□□ 1.74
TSR1-202ENST00000571806 RANGAP1P46060 587 aaPredicted RBP25.92■■□□□ 1.74
TSR1-202ENST00000571806 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
TSR1-202ENST00000571806 HECW2Q9P2P5 1572 aa25.86■■□□□ 1.73
TSR1-202ENST00000571806 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
TSR1-202ENST00000571806 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
TSR1-202ENST00000571806 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
TSR1-202ENST00000571806 FRMPD1Q5SYB0 1578 aa25.74■■□□□ 1.71
TSR1-202ENST00000571806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.74■■□□□ 1.71
TSR1-202ENST00000571806 FANCAO15360 1455 aa25.74■■□□□ 1.71
TSR1-202ENST00000571806 AKNAQ7Z591 1439 aa25.74■■□□□ 1.71
TSR1-202ENST00000571806 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
TSR1-202ENST00000571806 ADAMTSL3P82987 1691 aa25.73■■□□□ 1.71
TSR1-202ENST00000571806 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
TSR1-202ENST00000571806 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
TSR1-202ENST00000571806 PTPRMP28827 1452 aa25.69■■□□□ 1.7
TSR1-202ENST00000571806 RICTORQ6R327 1708 aa25.68■■□□□ 1.7
TSR1-202ENST00000571806 ILDR1Q86SU0 546 aaPredicted RBP25.68■■□□□ 1.7
TSR1-202ENST00000571806 BCORL1Q5H9F3 1711 aa25.67■■□□□ 1.7
TSR1-202ENST00000571806 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
TSR1-202ENST00000571806 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
TSR1-202ENST00000571806 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
TSR1-202ENST00000571806 ARHGEF40Q8TER5 1519 aa25.65■■□□□ 1.7
TSR1-202ENST00000571806 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
TSR1-202ENST00000571806 HECW1Q76N89 1606 aa25.64■■□□□ 1.7
TSR1-202ENST00000571806 MAGI2Q86UL8 1455 aa25.63■■□□□ 1.69
TSR1-202ENST00000571806 ZMYM4Q5VZL5 1548 aa25.63■■□□□ 1.69
TSR1-202ENST00000571806 PLCH2O75038 1416 aa25.63■■□□□ 1.69
TSR1-202ENST00000571806 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
TSR1-202ENST00000571806 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
TSR1-202ENST00000571806 POGZQ7Z3K3 1410 aa25.6■■□□□ 1.69
TSR1-202ENST00000571806 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.69
TSR1-202ENST00000571806 MADDQ8WXG6 1647 aa25.58■■□□□ 1.69
TSR1-202ENST00000571806 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
TSR1-202ENST00000571806 ZFYVE16Q7Z3T8 1539 aa25.56■■□□□ 1.68
TSR1-202ENST00000571806 SCAPERQ9BY12 1400 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms