RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CTTNBP2Q8WZ74 1663 aa30.23■■■□□ 2.43
RPAIN-210ENST00000571613 APLP2Q06481 763 aa30.2■■■□□ 2.42
RPAIN-210ENST00000571613 EFCAB5A4FU69 1503 aa30.17■■■□□ 2.42
RPAIN-210ENST00000571613 MAGI1Q96QZ7 1491 aaPredicted RBP30.17■■■□□ 2.42
RPAIN-210ENST00000571613 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
RPAIN-210ENST00000571613 PPARGC1BQ86YN6 1023 aaKnown RBP30.06■■■□□ 2.4
RPAIN-210ENST00000571613 SYNJ2O15056 1496 aa30.02■■■□□ 2.4
RPAIN-210ENST00000571613 GRIN2AQ12879 1464 aa30.01■■■□□ 2.39
RPAIN-210ENST00000571613 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
RPAIN-210ENST00000571613 IQGAP2Q13576 1575 aa29.97■■■□□ 2.39
RPAIN-210ENST00000571613 SAMD9Q5K651 1589 aa29.95■■■□□ 2.39
RPAIN-210ENST00000571613 KIAA0586Q9BVV6 1533 aa29.94■■■□□ 2.38
RPAIN-210ENST00000571613 FMN1Q68DA7 1419 aa29.93■■■□□ 2.38
RPAIN-210ENST00000571613 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
RPAIN-210ENST00000571613 FHOD3Q2V2M9 1422 aa29.91■■■□□ 2.38
RPAIN-210ENST00000571613 P3H3Q8IVL6 736 aa29.88■■■□□ 2.37
RPAIN-210ENST00000571613 UGGT2Q9NYU1 1516 aa29.86■■■□□ 2.37
RPAIN-210ENST00000571613 FYCO1Q9BQS8 1478 aa29.83■■■□□ 2.37
RPAIN-210ENST00000571613 CASKIN1Q8WXD9 1431 aa29.83■■■□□ 2.37
RPAIN-210ENST00000571613 TTBK1Q5TCY1 1321 aaPredicted RBP29.81■■■□□ 2.36
RPAIN-210ENST00000571613 NUP160Q12769 1436 aa29.81■■■□□ 2.36
RPAIN-210ENST00000571613 FBLN2P98095 1184 aa29.8■■■□□ 2.36
RPAIN-210ENST00000571613 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.36
RPAIN-210ENST00000571613 TIAM1Q13009 1591 aa29.74■■■□□ 2.35
RPAIN-210ENST00000571613 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
RPAIN-210ENST00000571613 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.35
RPAIN-210ENST00000571613 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
RPAIN-210ENST00000571613 ATP1B4Q9UN42 357 aaPredicted RBP29.65■■■□□ 2.34
RPAIN-210ENST00000571613 KIAA0556O60303 1618 aa29.64■■■□□ 2.34
RPAIN-210ENST00000571613 LRRC9Q6ZRR7 1453 aa29.64■■■□□ 2.33
RPAIN-210ENST00000571613 DISP1Q96F81 1524 aa29.63■■■□□ 2.33
RPAIN-210ENST00000571613 CARMIL2Q6F5E8 1435 aa29.61■■■□□ 2.33
RPAIN-210ENST00000571613 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
RPAIN-210ENST00000571613 HRCP23327 699 aa29.56■■■□□ 2.32
RPAIN-210ENST00000571613 CCDC18Q5T9S5 1454 aa29.56■■■□□ 2.32
RPAIN-210ENST00000571613 HECW1Q76N89 1606 aa29.54■■■□□ 2.32
RPAIN-210ENST00000571613 CHD1O14646 1710 aa29.53■■■□□ 2.32
RPAIN-210ENST00000571613 RRBP1Q9P2E9 1410 aaKnown RBP29.5■■■□□ 2.31
RPAIN-210ENST00000571613 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
RPAIN-210ENST00000571613 CCNB3Q8WWL7 1395 aa29.41■■■□□ 2.3
RPAIN-210ENST00000571613 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
RPAIN-210ENST00000571613 EHBP1L1Q8N3D4 1523 aa29.38■■■□□ 2.29
RPAIN-210ENST00000571613 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
RPAIN-210ENST00000571613 RAPGEF6Q8TEU7 1601 aa29.37■■■□□ 2.29
RPAIN-210ENST00000571613 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
RPAIN-210ENST00000571613 PRG4Q92954 1404 aaPredicted RBP29.36■■■□□ 2.29
RPAIN-210ENST00000571613 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
RPAIN-210ENST00000571613 PHLDB1Q86UU1 1377 aa29.32■■■□□ 2.28
RPAIN-210ENST00000571613 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
RPAIN-210ENST00000571613 CDK11AQ9UQ88 783 aaPredicted RBP29.3■■■□□ 2.28
RPAIN-210ENST00000571613 NUP153P49790 1475 aaKnown RBP29.29■■■□□ 2.28
RPAIN-210ENST00000571613 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
RPAIN-210ENST00000571613 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
RPAIN-210ENST00000571613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.28
RPAIN-210ENST00000571613 PTPRGP23470 1445 aa29.25■■■□□ 2.27
RPAIN-210ENST00000571613 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
RPAIN-210ENST00000571613 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
RPAIN-210ENST00000571613 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
RPAIN-210ENST00000571613 ABCA8O94911 1581 aa29.21■■■□□ 2.27
RPAIN-210ENST00000571613 ARHGEF11O15085 1522 aa29.19■■■□□ 2.26
RPAIN-210ENST00000571613 MAGI3Q5TCQ9 1506 aa29.19■■■□□ 2.26
RPAIN-210ENST00000571613 MYOM3Q5VTT5 1437 aa29.16■■■□□ 2.26
RPAIN-210ENST00000571613 FGD6Q6ZV73 1430 aa29.16■■■□□ 2.26
RPAIN-210ENST00000571613 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
RPAIN-210ENST00000571613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.15■■■□□ 2.26
RPAIN-210ENST00000571613 FAM50AQ14320 339 aaKnown RBP29.12■■■□□ 2.25
RPAIN-210ENST00000571613 ARID3CA6NKF2 412 aa29.09■■■□□ 2.25
RPAIN-210ENST00000571613 TROQ12816 1431 aaPredicted RBP29.09■■■□□ 2.25
RPAIN-210ENST00000571613 UACAQ9BZF9 1416 aa29.08■■■□□ 2.25
RPAIN-210ENST00000571613 MIA2Q96PC5 1412 aa29.06■■■□□ 2.24
RPAIN-210ENST00000571613 ATP10BO94823 1461 aa29.04■■■□□ 2.24
RPAIN-210ENST00000571613 PLEKHD1A6NEE1 506 aa29.03■■■□□ 2.24
RPAIN-210ENST00000571613 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
RPAIN-210ENST00000571613 ITGAEP38570 1179 aa29■■■□□ 2.23
RPAIN-210ENST00000571613 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
RPAIN-210ENST00000571613 TCOF1Q13428 1488 aaKnown RBP28.98■■■□□ 2.23
RPAIN-210ENST00000571613 ADCY10Q96PN6 1610 aa28.97■■■□□ 2.23
RPAIN-210ENST00000571613 ABCC2Q92887 1545 aa28.96■■■□□ 2.23
RPAIN-210ENST00000571613 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
RPAIN-210ENST00000571613 UHRF1BP1LA0JNW5 1464 aa28.93■■■□□ 2.22
RPAIN-210ENST00000571613 SETD5Q9C0A6 1442 aa28.9■■■□□ 2.22
RPAIN-210ENST00000571613 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
RPAIN-210ENST00000571613 KIF14Q15058 1648 aa28.87■■■□□ 2.21
RPAIN-210ENST00000571613 ITSN2Q9NZM3 1697 aa28.85■■■□□ 2.21
RPAIN-210ENST00000571613 RAB3GAP2Q9H2M9 1393 aa28.81■■■□□ 2.2
RPAIN-210ENST00000571613 GPATCH8Q9UKJ3 1502 aaKnown RBP28.8■■■□□ 2.2
RPAIN-210ENST00000571613 CFDP1Q9UEE9 299 aaPredicted RBP28.79■■■□□ 2.2
RPAIN-210ENST00000571613 KDM5BQ9UGL1 1544 aa28.78■■■□□ 2.2
RPAIN-210ENST00000571613 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
RPAIN-210ENST00000571613 DHX57Q6P158 1386 aaKnown RBP28.76■■■□□ 2.19
RPAIN-210ENST00000571613 HFM1A2PYH4 1435 aa28.75■■■□□ 2.19
RPAIN-210ENST00000571613 PTPRKQ15262 1439 aa28.73■■■□□ 2.19
RPAIN-210ENST00000571613 AKNAQ7Z591 1439 aa28.73■■■□□ 2.19
RPAIN-210ENST00000571613 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
RPAIN-210ENST00000571613 ACIN1Q9UKV3 1341 aaKnown RBP28.68■■■□□ 2.18
RPAIN-210ENST00000571613 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
RPAIN-210ENST00000571613 DNMT1P26358 1616 aaKnown RBP28.67■■■□□ 2.18
RPAIN-210ENST00000571613 DAPK1P53355 1430 aa28.67■■■□□ 2.18
RPAIN-210ENST00000571613 ROCK1Q13464 1354 aa28.66■■■□□ 2.18
RPAIN-210ENST00000571613 CDC42BPAQ5VT25 1732 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms