RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
SMG6-209ENST00000571442 RAPGEF2Q9Y4G8 1499 aa11.78□□□□□ -0.52
SMG6-209ENST00000571442 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
SMG6-209ENST00000571442 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
SMG6-209ENST00000571442 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
SMG6-209ENST00000571442 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
SMG6-209ENST00000571442 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
SMG6-209ENST00000571442 EEA1Q15075 1411 aa11.72□□□□□ -0.53
SMG6-209ENST00000571442 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
SMG6-209ENST00000571442 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
SMG6-209ENST00000571442 IQGAP2Q13576 1575 aa11.7□□□□□ -0.54
SMG6-209ENST00000571442 KIF21BO75037 1637 aa11.67□□□□□ -0.54
SMG6-209ENST00000571442 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
SMG6-209ENST00000571442 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
SMG6-209ENST00000571442 UGGT2Q9NYU1 1516 aa11.65□□□□□ -0.55
SMG6-209ENST00000571442 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
SMG6-209ENST00000571442 KIAA0556O60303 1618 aa11.61□□□□□ -0.55
SMG6-209ENST00000571442 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
SMG6-209ENST00000571442 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
SMG6-209ENST00000571442 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
SMG6-209ENST00000571442 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
SMG6-209ENST00000571442 CARMIL2Q6F5E8 1435 aa11.57□□□□□ -0.56
SMG6-209ENST00000571442 PTPRGP23470 1445 aa11.56□□□□□ -0.56
SMG6-209ENST00000571442 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
SMG6-209ENST00000571442 RANGAP1P46060 587 aaPredicted RBP11.55□□□□□ -0.56
SMG6-209ENST00000571442 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SMG6-209ENST00000571442 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
SMG6-209ENST00000571442 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
SMG6-209ENST00000571442 FHOD3Q2V2M9 1422 aa11.5□□□□□ -0.57
SMG6-209ENST00000571442 ABCA8O94911 1581 aa11.5□□□□□ -0.57
SMG6-209ENST00000571442 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
SMG6-209ENST00000571442 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
SMG6-209ENST00000571442 UHRF1BP1LA0JNW5 1464 aa11.48□□□□□ -0.57
SMG6-209ENST00000571442 ARHGAP35Q9NRY4 1499 aa11.48□□□□□ -0.57
SMG6-209ENST00000571442 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
SMG6-209ENST00000571442 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.57
SMG6-209ENST00000571442 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
SMG6-209ENST00000571442 MAPKBP1O60336 1514 aa11.44□□□□□ -0.58
SMG6-209ENST00000571442 KDM5BQ9UGL1 1544 aa11.44□□□□□ -0.58
SMG6-209ENST00000571442 KIF13AQ9H1H9 1805 aa11.44□□□□□ -0.58
SMG6-209ENST00000571442 RAPGEF6Q8TEU7 1601 aa11.42□□□□□ -0.58
SMG6-209ENST00000571442 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
SMG6-209ENST00000571442 NUP153P49790 1475 aaKnown RBP11.4□□□□□ -0.58
SMG6-209ENST00000571442 DIP2BQ9P265 1576 aa11.4□□□□□ -0.58
SMG6-209ENST00000571442 ATP10BO94823 1461 aa11.39□□□□□ -0.59
SMG6-209ENST00000571442 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMG6-209ENST00000571442 ASXL2Q76L83 1435 aa11.39□□□□□ -0.59
SMG6-209ENST00000571442 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
SMG6-209ENST00000571442 CLIP1P30622 1438 aa11.38□□□□□ -0.59
SMG6-209ENST00000571442 LRRIQ1Q96JM4 1722 aa11.37□□□□□ -0.59
SMG6-209ENST00000571442 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
SMG6-209ENST00000571442 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
SMG6-209ENST00000571442 CDK13Q14004 1512 aaKnown RBP11.35□□□□□ -0.59
SMG6-209ENST00000571442 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
SMG6-209ENST00000571442 FAM69CQ0P6D2 419 aa11.34□□□□□ -0.59
SMG6-209ENST00000571442 EPRSP07814 1512 aaKnown RBP11.34□□□□□ -0.59
SMG6-209ENST00000571442 WDR7Q9Y4E6 1490 aa11.33□□□□□ -0.6
SMG6-209ENST00000571442 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
SMG6-209ENST00000571442 TSPOAP1O95153 1857 aa11.32□□□□□ -0.6
SMG6-209ENST00000571442 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
SMG6-209ENST00000571442 GLI2P10070 1586 aa11.32□□□□□ -0.6
SMG6-209ENST00000571442 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
SMG6-209ENST00000571442 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
SMG6-209ENST00000571442 MAP3K4Q9Y6R4 1608 aa11.29□□□□□ -0.6
SMG6-209ENST00000571442 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
SMG6-209ENST00000571442 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
SMG6-209ENST00000571442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
SMG6-209ENST00000571442 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
SMG6-209ENST00000571442 MAGI3Q5TCQ9 1506 aa11.26□□□□□ -0.61
SMG6-209ENST00000571442 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
SMG6-209ENST00000571442 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
SMG6-209ENST00000571442 KDM6BO15054 1643 aa11.24□□□□□ -0.61
SMG6-209ENST00000571442 KIF14Q15058 1648 aa11.24□□□□□ -0.61
SMG6-209ENST00000571442 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
SMG6-209ENST00000571442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMG6-209ENST00000571442 TTC37Q6PGP7 1564 aa11.23□□□□□ -0.61
SMG6-209ENST00000571442 COL17A1Q9UMD9 1497 aaPredicted RBP11.21□□□□□ -0.61
SMG6-209ENST00000571442 CD109Q6YHK3 1445 aa11.21□□□□□ -0.61
SMG6-209ENST00000571442 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
SMG6-209ENST00000571442 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
SMG6-209ENST00000571442 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
SMG6-209ENST00000571442 VPS8Q8N3P4 1428 aa11.2□□□□□ -0.62
SMG6-209ENST00000571442 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
SMG6-209ENST00000571442 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
SMG6-209ENST00000571442 MYO5CQ9NQX4 1742 aa11.13□□□□□ -0.63
SMG6-209ENST00000571442 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
SMG6-209ENST00000571442 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
SMG6-209ENST00000571442 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
SMG6-209ENST00000571442 PLCH2O75038 1416 aa11.12□□□□□ -0.63
SMG6-209ENST00000571442 EHBP1L1Q8N3D4 1523 aa11.11□□□□□ -0.63
SMG6-209ENST00000571442 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
SMG6-209ENST00000571442 FANCAO15360 1455 aa11.11□□□□□ -0.63
SMG6-209ENST00000571442 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
SMG6-209ENST00000571442 PREX2Q70Z35 1606 aa11.1□□□□□ -0.63
SMG6-209ENST00000571442 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
SMG6-209ENST00000571442 NEO1Q92859 1461 aa11.1□□□□□ -0.63
SMG6-209ENST00000571442 ARAP3Q8WWN8 1544 aa11.09□□□□□ -0.63
SMG6-209ENST00000571442 LRRC9Q6ZRR7 1453 aa11.09□□□□□ -0.63
SMG6-209ENST00000571442 GPATCH8Q9UKJ3 1502 aaKnown RBP11.09□□□□□ -0.63
SMG6-209ENST00000571442 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms