RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
RPA1-203ENST00000571058 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
RPA1-203ENST00000571058 KIAA0586Q9BVV6 1533 aa29.51■■■□□ 2.32
RPA1-203ENST00000571058 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.31
RPA1-203ENST00000571058 RAPGEF2Q9Y4G8 1499 aa29.34■■■□□ 2.29
RPA1-203ENST00000571058 IQGAP2Q13576 1575 aa29.27■■■□□ 2.28
RPA1-203ENST00000571058 CARMIL2Q6F5E8 1435 aa29.23■■■□□ 2.27
RPA1-203ENST00000571058 NPM1P06748 294 aaKnown RBP eCLIP29.15■■■□□ 2.26
RPA1-203ENST00000571058 PTPRGP23470 1445 aa29.13■■■□□ 2.25
RPA1-203ENST00000571058 PRXQ9BXM0 1461 aa29.13■■■□□ 2.25
RPA1-203ENST00000571058 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
RPA1-203ENST00000571058 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
RPA1-203ENST00000571058 ADCY10Q96PN6 1610 aa29.1■■■□□ 2.25
RPA1-203ENST00000571058 CTTNBP2Q8WZ74 1663 aa29.07■■■□□ 2.24
RPA1-203ENST00000571058 DISP1Q96F81 1524 aa29.06■■■□□ 2.24
RPA1-203ENST00000571058 MAPKBP1O60336 1514 aa29.05■■■□□ 2.24
RPA1-203ENST00000571058 EEA1Q15075 1411 aa29.05■■■□□ 2.24
RPA1-203ENST00000571058 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
RPA1-203ENST00000571058 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
RPA1-203ENST00000571058 GOLGA3Q08378 1498 aa28.97■■■□□ 2.23
RPA1-203ENST00000571058 KIF13AQ9H1H9 1805 aa28.97■■■□□ 2.23
RPA1-203ENST00000571058 UHRF1BP1LA0JNW5 1464 aa28.96■■■□□ 2.23
RPA1-203ENST00000571058 ABCC10Q5T3U5 1492 aa28.95■■■□□ 2.22
RPA1-203ENST00000571058 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
RPA1-203ENST00000571058 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
RPA1-203ENST00000571058 UACAQ9BZF9 1416 aa28.93■■■□□ 2.22
RPA1-203ENST00000571058 FAM69CQ0P6D2 419 aa28.87■■■□□ 2.21
RPA1-203ENST00000571058 DIP2BQ9P265 1576 aa28.87■■■□□ 2.21
RPA1-203ENST00000571058 KDM5BQ9UGL1 1544 aa28.8■■■□□ 2.2
RPA1-203ENST00000571058 PLB1Q6P1J6 1458 aa28.8■■■□□ 2.2
RPA1-203ENST00000571058 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
RPA1-203ENST00000571058 FAM9AQ8IZU1 332 aaPredicted RBP28.77■■■□□ 2.2
RPA1-203ENST00000571058 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
RPA1-203ENST00000571058 KIF21BO75037 1637 aa28.72■■■□□ 2.19
RPA1-203ENST00000571058 ZCCHC11Q5TAX3 1644 aaKnown RBP28.7■■■□□ 2.19
RPA1-203ENST00000571058 ABCA8O94911 1581 aa28.69■■■□□ 2.18
RPA1-203ENST00000571058 GLI2P10070 1586 aa28.68■■■□□ 2.18
RPA1-203ENST00000571058 SAMD9Q5K651 1589 aa28.67■■■□□ 2.18
RPA1-203ENST00000571058 TSPOAP1O95153 1857 aa28.6■■■□□ 2.17
RPA1-203ENST00000571058 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
RPA1-203ENST00000571058 P3H3Q8IVL6 736 aa28.58■■■□□ 2.17
RPA1-203ENST00000571058 WDR7Q9Y4E6 1490 aa28.58■■■□□ 2.17
RPA1-203ENST00000571058 EFCAB5A4FU69 1503 aa28.53■■■□□ 2.16
RPA1-203ENST00000571058 KDM6BO15054 1643 aa28.52■■■□□ 2.16
RPA1-203ENST00000571058 MAP3K4Q9Y6R4 1608 aa28.51■■■□□ 2.15
RPA1-203ENST00000571058 RAPGEF6Q8TEU7 1601 aa28.48■■■□□ 2.15
RPA1-203ENST00000571058 PPRC1Q5VV67 1664 aaKnown RBP28.48■■■□□ 2.15
RPA1-203ENST00000571058 TEX14Q8IWB6 1497 aa28.46■■■□□ 2.15
RPA1-203ENST00000571058 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
RPA1-203ENST00000571058 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
RPA1-203ENST00000571058 ATP10BO94823 1461 aa28.44■■■□□ 2.14
RPA1-203ENST00000571058 FHOD3Q2V2M9 1422 aa28.43■■■□□ 2.14
RPA1-203ENST00000571058 CFAP43Q8NDM7 1665 aa28.39■■■□□ 2.14
RPA1-203ENST00000571058 KCNH8Q96L42 1107 aa28.37■■■□□ 2.13
RPA1-203ENST00000571058 NUP153P49790 1475 aaKnown RBP28.35■■■□□ 2.13
RPA1-203ENST00000571058 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
RPA1-203ENST00000571058 MAGI3Q5TCQ9 1506 aa28.34■■■□□ 2.13
RPA1-203ENST00000571058 ARID3CA6NKF2 412 aa28.33■■■□□ 2.13
RPA1-203ENST00000571058 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
RPA1-203ENST00000571058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.3■■■□□ 2.12
RPA1-203ENST00000571058 HNRNPUL2Q1KMD3 747 aaKnown RBP28.3■■■□□ 2.12
RPA1-203ENST00000571058 AEBP2Q6ZN18 517 aaPredicted RBP28.28■■■□□ 2.12
RPA1-203ENST00000571058 FMN1Q68DA7 1419 aa28.27■■■□□ 2.12
RPA1-203ENST00000571058 ARHGAP35Q9NRY4 1499 aa28.25■■■□□ 2.11
RPA1-203ENST00000571058 ABCA9Q8IUA7 1624 aa28.25■■■□□ 2.11
RPA1-203ENST00000571058 COL17A1Q9UMD9 1497 aaPredicted RBP28.21■■■□□ 2.11
RPA1-203ENST00000571058 PLEKHD1A6NEE1 506 aa28.21■■■□□ 2.11
RPA1-203ENST00000571058 PHLDB1Q86UU1 1377 aa28.17■■■□□ 2.1
RPA1-203ENST00000571058 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
RPA1-203ENST00000571058 ARAP3Q8WWN8 1544 aa28.12■■■□□ 2.09
RPA1-203ENST00000571058 NEO1Q92859 1461 aa28.08■■■□□ 2.09
RPA1-203ENST00000571058 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.08
RPA1-203ENST00000571058 CDK11AQ9UQ88 783 aaPredicted RBP28.06■■■□□ 2.08
RPA1-203ENST00000571058 ATP1B4Q9UN42 357 aaPredicted RBP28.05■■■□□ 2.08
RPA1-203ENST00000571058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.01■■■□□ 2.07
RPA1-203ENST00000571058 CLIP1P30622 1438 aa27.99■■■□□ 2.07
RPA1-203ENST00000571058 KDM4FA0A1W2PPD8 638 aa27.98■■■□□ 2.07
RPA1-203ENST00000571058 CFAP74Q9C0B2 1584 aa27.98■■■□□ 2.07
RPA1-203ENST00000571058 CASKIN1Q8WXD9 1431 aa27.97■■■□□ 2.07
RPA1-203ENST00000571058 TTC37Q6PGP7 1564 aa27.95■■■□□ 2.07
RPA1-203ENST00000571058 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
RPA1-203ENST00000571058 FANCAO15360 1455 aa27.93■■■□□ 2.06
RPA1-203ENST00000571058 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
RPA1-203ENST00000571058 PCF11O94913 1555 aaKnown RBP27.91■■■□□ 2.06
RPA1-203ENST00000571058 ADGRL1O94910 1474 aa27.9■■■□□ 2.06
RPA1-203ENST00000571058 FYCO1Q9BQS8 1478 aa27.9■■■□□ 2.06
RPA1-203ENST00000571058 LRRIQ1Q96JM4 1722 aa27.89■■■□□ 2.06
RPA1-203ENST00000571058 KIF14Q15058 1648 aa27.89■■■□□ 2.06
RPA1-203ENST00000571058 AKNAQ7Z591 1439 aa27.89■■■□□ 2.06
RPA1-203ENST00000571058 PLCH2O75038 1416 aa27.88■■■□□ 2.05
RPA1-203ENST00000571058 RAPGEF3O95398 923 aa27.87■■■□□ 2.05
RPA1-203ENST00000571058 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
RPA1-203ENST00000571058 MYO5CQ9NQX4 1742 aa27.84■■■□□ 2.05
RPA1-203ENST00000571058 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
RPA1-203ENST00000571058 RICTORQ6R327 1708 aa27.8■■■□□ 2.04
RPA1-203ENST00000571058 EFCAB2Q5VUJ9 269 aa27.79■■■□□ 2.04
RPA1-203ENST00000571058 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
RPA1-203ENST00000571058 ZMYM4Q5VZL5 1548 aa27.74■■■□□ 2.03
RPA1-203ENST00000571058 SCAPERQ9BY12 1400 aa27.72■■■□□ 2.03
RPA1-203ENST00000571058 MAGI2Q86UL8 1455 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms