RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
SMG6-205ENST00000570659 KDM6BO15054 1643 aa13.51□□□□□ -0.25
SMG6-205ENST00000570659 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
SMG6-205ENST00000570659 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
SMG6-205ENST00000570659 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
SMG6-205ENST00000570659 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
SMG6-205ENST00000570659 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
SMG6-205ENST00000570659 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.26
SMG6-205ENST00000570659 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
SMG6-205ENST00000570659 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
SMG6-205ENST00000570659 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
SMG6-205ENST00000570659 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
SMG6-205ENST00000570659 HECW2Q9P2P5 1572 aa13.4□□□□□ -0.26
SMG6-205ENST00000570659 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMG6-205ENST00000570659 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
SMG6-205ENST00000570659 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
SMG6-205ENST00000570659 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
SMG6-205ENST00000570659 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
SMG6-205ENST00000570659 CUL7Q14999 1698 aa13.28□□□□□ -0.28
SMG6-205ENST00000570659 GLI2P10070 1586 aa13.27□□□□□ -0.29
SMG6-205ENST00000570659 IGF1RP08069 1367 aa13.25□□□□□ -0.29
SMG6-205ENST00000570659 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
SMG6-205ENST00000570659 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
SMG6-205ENST00000570659 PTPRGP23470 1445 aa13.23□□□□□ -0.29
SMG6-205ENST00000570659 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
SMG6-205ENST00000570659 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
SMG6-205ENST00000570659 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
SMG6-205ENST00000570659 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SMG6-205ENST00000570659 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
SMG6-205ENST00000570659 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
SMG6-205ENST00000570659 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
SMG6-205ENST00000570659 KIF21BO75037 1637 aa13.14□□□□□ -0.31
SMG6-205ENST00000570659 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
SMG6-205ENST00000570659 IQGAP2Q13576 1575 aa13.11□□□□□ -0.31
SMG6-205ENST00000570659 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
SMG6-205ENST00000570659 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
SMG6-205ENST00000570659 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
SMG6-205ENST00000570659 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
SMG6-205ENST00000570659 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
SMG6-205ENST00000570659 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
SMG6-205ENST00000570659 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
SMG6-205ENST00000570659 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
SMG6-205ENST00000570659 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
SMG6-205ENST00000570659 PTPRMP28827 1452 aa13.01□□□□□ -0.33
SMG6-205ENST00000570659 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
SMG6-205ENST00000570659 CD109Q6YHK3 1445 aa13□□□□□ -0.33
SMG6-205ENST00000570659 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
SMG6-205ENST00000570659 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
SMG6-205ENST00000570659 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
SMG6-205ENST00000570659 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
SMG6-205ENST00000570659 ABCA8O94911 1581 aa12.98□□□□□ -0.33
SMG6-205ENST00000570659 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
SMG6-205ENST00000570659 FRMPD1Q5SYB0 1578 aa12.96□□□□□ -0.33
SMG6-205ENST00000570659 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.34
SMG6-205ENST00000570659 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
SMG6-205ENST00000570659 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
SMG6-205ENST00000570659 ARAP3Q8WWN8 1544 aa12.93□□□□□ -0.34
SMG6-205ENST00000570659 HSPA2P54652 639 aa12.93□□□□□ -0.34
SMG6-205ENST00000570659 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
SMG6-205ENST00000570659 RAPGEF3O95398 923 aa12.92□□□□□ -0.34
SMG6-205ENST00000570659 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
SMG6-205ENST00000570659 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
SMG6-205ENST00000570659 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
SMG6-205ENST00000570659 ATP10BO94823 1461 aa12.86□□□□□ -0.35
SMG6-205ENST00000570659 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
SMG6-205ENST00000570659 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
SMG6-205ENST00000570659 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
SMG6-205ENST00000570659 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
SMG6-205ENST00000570659 CERKQ8TCT0 537 aa12.8□□□□□ -0.36
SMG6-205ENST00000570659 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
SMG6-205ENST00000570659 DISP3Q9P2K9 1392 aa12.78□□□□□ -0.36
SMG6-205ENST00000570659 YEATS2Q9ULM3 1422 aa12.78□□□□□ -0.36
SMG6-205ENST00000570659 SOCS7O14512 581 aa12.77□□□□□ -0.37
SMG6-205ENST00000570659 ARID4BQ4LE39 1312 aaPredicted RBP12.76□□□□□ -0.37
SMG6-205ENST00000570659 NEO1Q92859 1461 aa12.76□□□□□ -0.37
SMG6-205ENST00000570659 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
SMG6-205ENST00000570659 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
SMG6-205ENST00000570659 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
SMG6-205ENST00000570659 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
SMG6-205ENST00000570659 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
SMG6-205ENST00000570659 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
SMG6-205ENST00000570659 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
SMG6-205ENST00000570659 SPATA31D1Q6ZQQ2 1576 aa12.7□□□□□ -0.38
SMG6-205ENST00000570659 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
SMG6-205ENST00000570659 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
SMG6-205ENST00000570659 MLECQ14165 292 aa12.69□□□□□ -0.38
SMG6-205ENST00000570659 FHOD3Q2V2M9 1422 aa12.69□□□□□ -0.38
SMG6-205ENST00000570659 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
SMG6-205ENST00000570659 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
SMG6-205ENST00000570659 DENND4BO75064 1496 aaPredicted RBP12.68□□□□□ -0.38
SMG6-205ENST00000570659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMG6-205ENST00000570659 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
SMG6-205ENST00000570659 AKNAQ7Z591 1439 aa12.67□□□□□ -0.38
SMG6-205ENST00000570659 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
SMG6-205ENST00000570659 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
SMG6-205ENST00000570659 FANCAO15360 1455 aa12.65□□□□□ -0.38
SMG6-205ENST00000570659 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
SMG6-205ENST00000570659 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
SMG6-205ENST00000570659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
SMG6-205ENST00000570659 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms