RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 NPM1P06748 294 aaKnown RBP eCLIP36.91■■■■□ 3.5
PKD1-240ENST00000570253 KIF27Q86VH2 1401 aa36.91■■■■□ 3.5
PKD1-240ENST00000570253 CUL7Q14999 1698 aa36.87■■■■□ 3.49
PKD1-240ENST00000570253 KIF13AQ9H1H9 1805 aa36.83■■■■□ 3.49
PKD1-240ENST00000570253 KIAA0586Q9BVV6 1533 aa36.81■■■■□ 3.48
PKD1-240ENST00000570253 IGF1RP08069 1367 aa36.79■■■■□ 3.48
PKD1-240ENST00000570253 MAPKBP1O60336 1514 aa36.71■■■■□ 3.47
PKD1-240ENST00000570253 FAM69CQ0P6D2 419 aa36.7■■■■□ 3.47
PKD1-240ENST00000570253 ABCC10Q5T3U5 1492 aa36.69■■■■□ 3.46
PKD1-240ENST00000570253 ADCY10Q96PN6 1610 aa36.67■■■■□ 3.46
PKD1-240ENST00000570253 CARMIL1Q5VZK9 1371 aa36.63■■■■□ 3.45
PKD1-240ENST00000570253 DIP2BQ9P265 1576 aa36.58■■■■□ 3.45
PKD1-240ENST00000570253 CARMIL2Q6F5E8 1435 aa36.56■■■■□ 3.44
PKD1-240ENST00000570253 PTPRGP23470 1445 aa36.54■■■■□ 3.44
PKD1-240ENST00000570253 TTBK1Q5TCY1 1321 aaPredicted RBP36.48■■■■□ 3.43
PKD1-240ENST00000570253 IQGAP2Q13576 1575 aa36.46■■■■□ 3.43
PKD1-240ENST00000570253 TNIKQ9UKE5 1360 aa36.46■■■■□ 3.43
PKD1-240ENST00000570253 KDM6BO15054 1643 aa36.38■■■■□ 3.41
PKD1-240ENST00000570253 TSPOAP1O95153 1857 aa36.37■■■■□ 3.41
PKD1-240ENST00000570253 ABCC2Q92887 1545 aa36.35■■■■□ 3.41
PKD1-240ENST00000570253 RAPGEF2Q9Y4G8 1499 aa36.3■■■■□ 3.4
PKD1-240ENST00000570253 PLB1Q6P1J6 1458 aa36.27■■■■□ 3.4
PKD1-240ENST00000570253 UHRF1BP1LA0JNW5 1464 aa36.25■■■■□ 3.39
PKD1-240ENST00000570253 UACAQ9BZF9 1416 aa36.24■■■■□ 3.39
PKD1-240ENST00000570253 ASXL2Q76L83 1435 aa36.23■■■■□ 3.39
PKD1-240ENST00000570253 DISP1Q96F81 1524 aa36.2■■■■□ 3.39
PKD1-240ENST00000570253 UGGT2Q9NYU1 1516 aa36.18■■■■□ 3.38
PKD1-240ENST00000570253 GLI2P10070 1586 aa36.15■■■■□ 3.38
PKD1-240ENST00000570253 KIAA0556O60303 1618 aa36.11■■■■□ 3.37
PKD1-240ENST00000570253 KDM5BQ9UGL1 1544 aa36.07■■■■□ 3.36
PKD1-240ENST00000570253 CTTNBP2Q8WZ74 1663 aa36.03■■■■□ 3.36
PKD1-240ENST00000570253 ZCCHC11Q5TAX3 1644 aaKnown RBP36.01■■■■□ 3.36
PKD1-240ENST00000570253 PPRC1Q5VV67 1664 aaKnown RBP36■■■■□ 3.35
PKD1-240ENST00000570253 EPRSP07814 1512 aaKnown RBP36■■■■□ 3.35
PKD1-240ENST00000570253 GOLGA3Q08378 1498 aa35.99■■■■□ 3.35
PKD1-240ENST00000570253 TEX14Q8IWB6 1497 aa35.98■■■■□ 3.35
PKD1-240ENST00000570253 KDM4FA0A1W2PPD8 638 aa35.96■■■■□ 3.35
PKD1-240ENST00000570253 MAP3K4Q9Y6R4 1608 aa35.94■■■■□ 3.34
PKD1-240ENST00000570253 FAM9AQ8IZU1 332 aaPredicted RBP35.89■■■■□ 3.34
PKD1-240ENST00000570253 WDR7Q9Y4E6 1490 aa35.87■■■■□ 3.33
PKD1-240ENST00000570253 PRXQ9BXM0 1461 aa35.79■■■■□ 3.32
PKD1-240ENST00000570253 ABCA8O94911 1581 aa35.75■■■■□ 3.31
PKD1-240ENST00000570253 ADGRL1O94910 1474 aa35.73■■■■□ 3.31
PKD1-240ENST00000570253 COL17A1Q9UMD9 1497 aaPredicted RBP35.72■■■■□ 3.31
PKD1-240ENST00000570253 CFAP43Q8NDM7 1665 aa35.71■■■■□ 3.31
PKD1-240ENST00000570253 CD109Q6YHK3 1445 aa35.69■■■■□ 3.3
PKD1-240ENST00000570253 KCNH8Q96L42 1107 aa35.69■■■■□ 3.3
PKD1-240ENST00000570253 MAGI3Q5TCQ9 1506 aa35.64■■■■□ 3.3
PKD1-240ENST00000570253 P3H3Q8IVL6 736 aa35.55■■■■□ 3.28
PKD1-240ENST00000570253 CSRNP3Q8WYN3 585 aa35.54■■■■□ 3.28
PKD1-240ENST00000570253 ARID3CA6NKF2 412 aa35.49■■■■□ 3.27
PKD1-240ENST00000570253 ATP10BO94823 1461 aa35.44■■■■□ 3.26
PKD1-240ENST00000570253 SAMD9Q5K651 1589 aa35.43■■■■□ 3.26
PKD1-240ENST00000570253 EEA1Q15075 1411 aa35.43■■■■□ 3.26
PKD1-240ENST00000570253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.4■■■■□ 3.26
PKD1-240ENST00000570253 HNRNPUL2Q1KMD3 747 aaKnown RBP35.4■■■■□ 3.26
PKD1-240ENST00000570253 RAPGEF6Q8TEU7 1601 aa35.39■■■■□ 3.26
PKD1-240ENST00000570253 PHLDB1Q86UU1 1377 aa35.37■■■■□ 3.25
PKD1-240ENST00000570253 ARAP3Q8WWN8 1544 aa35.37■■■■□ 3.25
PKD1-240ENST00000570253 ABCA9Q8IUA7 1624 aa35.35■■■■□ 3.25
PKD1-240ENST00000570253 HECW2Q9P2P5 1572 aa35.29■■■■□ 3.24
PKD1-240ENST00000570253 KIF21BO75037 1637 aa35.28■■■■□ 3.24
PKD1-240ENST00000570253 RANGAP1P46060 587 aaPredicted RBP35.28■■■■□ 3.24
PKD1-240ENST00000570253 NEO1Q92859 1461 aa35.23■■■■□ 3.23
PKD1-240ENST00000570253 FHOD3Q2V2M9 1422 aa35.2■■■■□ 3.23
PKD1-240ENST00000570253 NUP153P49790 1475 aaKnown RBP35.19■■■■□ 3.22
PKD1-240ENST00000570253 PLEKHD1A6NEE1 506 aa35.16■■■■□ 3.22
PKD1-240ENST00000570253 EFCAB5A4FU69 1503 aa35.13■■■■□ 3.21
PKD1-240ENST00000570253 RAPGEF3O95398 923 aa35.12■■■■□ 3.21
PKD1-240ENST00000570253 ILDR1Q86SU0 546 aaPredicted RBP35.11■■■■□ 3.21
PKD1-240ENST00000570253 CFAP74Q9C0B2 1584 aa35.04■■■■□ 3.2
PKD1-240ENST00000570253 ARID4BQ4LE39 1312 aaPredicted RBP35.04■■■■□ 3.2
PKD1-240ENST00000570253 DENND4BO75064 1496 aaPredicted RBP34.99■■■■□ 3.19
PKD1-240ENST00000570253 ADAMTSL3P82987 1691 aa34.98■■■■□ 3.19
PKD1-240ENST00000570253 FRMPD1Q5SYB0 1578 aa34.98■■■■□ 3.19
PKD1-240ENST00000570253 PTPRMP28827 1452 aa34.97■■■■□ 3.19
PKD1-240ENST00000570253 FANCAO15360 1455 aa34.96■■■■□ 3.19
PKD1-240ENST00000570253 AKNAQ7Z591 1439 aa34.95■■■■□ 3.19
PKD1-240ENST00000570253 BCORL1Q5H9F3 1711 aa34.93■■■■□ 3.18
PKD1-240ENST00000570253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.92■■■■□ 3.18
PKD1-240ENST00000570253 UBTFP17480 764 aaKnown RBP34.91■■■■□ 3.18
PKD1-240ENST00000570253 ARHGEF40Q8TER5 1519 aa34.91■■■■□ 3.18
PKD1-240ENST00000570253 RICTORQ6R327 1708 aa34.89■■■■□ 3.18
PKD1-240ENST00000570253 TTC37Q6PGP7 1564 aa34.87■■■■□ 3.17
PKD1-240ENST00000570253 FMN1Q68DA7 1419 aa34.85■■■■□ 3.17
PKD1-240ENST00000570253 ATP1B4Q9UN42 357 aaPredicted RBP34.85■■■■□ 3.17
PKD1-240ENST00000570253 MADDQ8WXG6 1647 aa34.84■■■■□ 3.17
PKD1-240ENST00000570253 CDK13Q14004 1512 aaKnown RBP34.84■■■■□ 3.17
PKD1-240ENST00000570253 POGZQ7Z3K3 1410 aa34.83■■■■□ 3.17
PKD1-240ENST00000570253 EHMT2Q96KQ7 1210 aa34.82■■■■□ 3.16
PKD1-240ENST00000570253 HECW1Q76N89 1606 aa34.81■■■■□ 3.16
PKD1-240ENST00000570253 CDK11AQ9UQ88 783 aaPredicted RBP34.8■■■■□ 3.16
PKD1-240ENST00000570253 ZMYM4Q5VZL5 1548 aa34.79■■■■□ 3.16
PKD1-240ENST00000570253 ZFYVE16Q7Z3T8 1539 aa34.78■■■■□ 3.16
PKD1-240ENST00000570253 MAGI2Q86UL8 1455 aa34.77■■■■□ 3.16
PKD1-240ENST00000570253 RIMS1Q86UR5 1692 aaKnown RBP34.75■■■■□ 3.15
PKD1-240ENST00000570253 PLCH2O75038 1416 aa34.73■■■■□ 3.15
PKD1-240ENST00000570253 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
PKD1-240ENST00000570253 SCAPERQ9BY12 1400 aa34.7■■■■□ 3.15
PKD1-240ENST00000570253 MYO5CQ9NQX4 1742 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms