RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
GTF3C1-212ENST00000570129 JPH4Q96JJ6 628 aa16.6■□□□□ 0.25
GTF3C1-212ENST00000570129 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
GTF3C1-212ENST00000570129 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
GTF3C1-212ENST00000570129 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
GTF3C1-212ENST00000570129 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
GTF3C1-212ENST00000570129 CUL7Q14999 1698 aa16.5■□□□□ 0.23
GTF3C1-212ENST00000570129 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
GTF3C1-212ENST00000570129 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
GTF3C1-212ENST00000570129 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
GTF3C1-212ENST00000570129 SHROOM2Q13796 1616 aa16.47■□□□□ 0.23
GTF3C1-212ENST00000570129 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-212ENST00000570129 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
GTF3C1-212ENST00000570129 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
GTF3C1-212ENST00000570129 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
GTF3C1-212ENST00000570129 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
GTF3C1-212ENST00000570129 PTPRGP23470 1445 aa16.31■□□□□ 0.2
GTF3C1-212ENST00000570129 EEA1Q15075 1411 aa16.31■□□□□ 0.2
GTF3C1-212ENST00000570129 UGGT2Q9NYU1 1516 aa16.29■□□□□ 0.2
GTF3C1-212ENST00000570129 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
GTF3C1-212ENST00000570129 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-212ENST00000570129 CARMIL2Q6F5E8 1435 aa16.26■□□□□ 0.19
GTF3C1-212ENST00000570129 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
GTF3C1-212ENST00000570129 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
GTF3C1-212ENST00000570129 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.18
GTF3C1-212ENST00000570129 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
GTF3C1-212ENST00000570129 KIF21BO75037 1637 aa16.19■□□□□ 0.18
GTF3C1-212ENST00000570129 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
GTF3C1-212ENST00000570129 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
GTF3C1-212ENST00000570129 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
GTF3C1-212ENST00000570129 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF3C1-212ENST00000570129 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
GTF3C1-212ENST00000570129 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
GTF3C1-212ENST00000570129 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
GTF3C1-212ENST00000570129 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
GTF3C1-212ENST00000570129 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
GTF3C1-212ENST00000570129 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
GTF3C1-212ENST00000570129 ASXL2Q76L83 1435 aa16.07■□□□□ 0.16
GTF3C1-212ENST00000570129 ABCA8O94911 1581 aa16.07■□□□□ 0.16
GTF3C1-212ENST00000570129 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
GTF3C1-212ENST00000570129 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
GTF3C1-212ENST00000570129 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
GTF3C1-212ENST00000570129 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
GTF3C1-212ENST00000570129 ATP10BO94823 1461 aa16.03■□□□□ 0.16
GTF3C1-212ENST00000570129 MAPKBP1O60336 1514 aa16.02■□□□□ 0.15
GTF3C1-212ENST00000570129 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-212ENST00000570129 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
GTF3C1-212ENST00000570129 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
GTF3C1-212ENST00000570129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
GTF3C1-212ENST00000570129 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
GTF3C1-212ENST00000570129 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
GTF3C1-212ENST00000570129 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
GTF3C1-212ENST00000570129 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
GTF3C1-212ENST00000570129 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
GTF3C1-212ENST00000570129 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
GTF3C1-212ENST00000570129 CLIP1P30622 1438 aa15.93■□□□□ 0.14
GTF3C1-212ENST00000570129 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
GTF3C1-212ENST00000570129 CDK13Q14004 1512 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-212ENST00000570129 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
GTF3C1-212ENST00000570129 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
GTF3C1-212ENST00000570129 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-212ENST00000570129 GLI2P10070 1586 aa15.85■□□□□ 0.13
GTF3C1-212ENST00000570129 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
GTF3C1-212ENST00000570129 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
GTF3C1-212ENST00000570129 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
GTF3C1-212ENST00000570129 CD109Q6YHK3 1445 aa15.82■□□□□ 0.12
GTF3C1-212ENST00000570129 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
GTF3C1-212ENST00000570129 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
GTF3C1-212ENST00000570129 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-212ENST00000570129 LRRIQ1Q96JM4 1722 aa15.78■□□□□ 0.12
GTF3C1-212ENST00000570129 MAGI3Q5TCQ9 1506 aa15.75■□□□□ 0.11
GTF3C1-212ENST00000570129 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
GTF3C1-212ENST00000570129 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
GTF3C1-212ENST00000570129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.11
GTF3C1-212ENST00000570129 KIF14Q15058 1648 aa15.7■□□□□ 0.1
GTF3C1-212ENST00000570129 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
GTF3C1-212ENST00000570129 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
GTF3C1-212ENST00000570129 KDM6BO15054 1643 aa15.69■□□□□ 0.1
GTF3C1-212ENST00000570129 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-212ENST00000570129 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
GTF3C1-212ENST00000570129 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-212ENST00000570129 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
GTF3C1-212ENST00000570129 KANK4Q5T7N3 995 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-212ENST00000570129 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
GTF3C1-212ENST00000570129 PLCH2O75038 1416 aa15.62■□□□□ 0.09
GTF3C1-212ENST00000570129 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
GTF3C1-212ENST00000570129 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
GTF3C1-212ENST00000570129 CCDC18Q5T9S5 1454 aa15.61■□□□□ 0.09
GTF3C1-212ENST00000570129 FANCAO15360 1455 aa15.6■□□□□ 0.09
GTF3C1-212ENST00000570129 KDM4FA0A1W2PPD8 638 aa15.6■□□□□ 0.09
GTF3C1-212ENST00000570129 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
GTF3C1-212ENST00000570129 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
GTF3C1-212ENST00000570129 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
GTF3C1-212ENST00000570129 AFAP1Q8N556 730 aa15.58■□□□□ 0.08
GTF3C1-212ENST00000570129 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
GTF3C1-212ENST00000570129 MTUS2Q5JR59 1369 aa15.58■□□□□ 0.08
GTF3C1-212ENST00000570129 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
GTF3C1-212ENST00000570129 NEO1Q92859 1461 aa15.57■□□□□ 0.08
GTF3C1-212ENST00000570129 ARHGEF12Q9NZN5 1544 aa15.55■□□□□ 0.08
GTF3C1-212ENST00000570129 GPATCH8Q9UKJ3 1502 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms