RNA–Protein interactions for RNA: ENST00000570115.5

SIN3A-214, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-214ENST00000570115 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
SIN3A-214ENST00000570115 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
SIN3A-214ENST00000570115 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
SIN3A-214ENST00000570115 CUL7Q14999 1698 aa19.4■□□□□ 0.7
SIN3A-214ENST00000570115 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
SIN3A-214ENST00000570115 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
SIN3A-214ENST00000570115 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
SIN3A-214ENST00000570115 MAPKBP1O60336 1514 aa19.34■□□□□ 0.69
SIN3A-214ENST00000570115 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.69
SIN3A-214ENST00000570115 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
SIN3A-214ENST00000570115 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
SIN3A-214ENST00000570115 DIP2BQ9P265 1576 aa19.27■□□□□ 0.67
SIN3A-214ENST00000570115 PTPRGP23470 1445 aa19.25■□□□□ 0.67
SIN3A-214ENST00000570115 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
SIN3A-214ENST00000570115 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
SIN3A-214ENST00000570115 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
SIN3A-214ENST00000570115 ABCC2Q92887 1545 aa19.15■□□□□ 0.66
SIN3A-214ENST00000570115 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
SIN3A-214ENST00000570115 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
SIN3A-214ENST00000570115 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
SIN3A-214ENST00000570115 TSPOAP1O95153 1857 aa19.13■□□□□ 0.65
SIN3A-214ENST00000570115 UHRF1BP1LA0JNW5 1464 aa19.12■□□□□ 0.65
SIN3A-214ENST00000570115 KDM6BO15054 1643 aa19.11■□□□□ 0.65
SIN3A-214ENST00000570115 PLB1Q6P1J6 1458 aa19.09■□□□□ 0.65
SIN3A-214ENST00000570115 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
SIN3A-214ENST00000570115 UACAQ9BZF9 1416 aa19.09■□□□□ 0.65
SIN3A-214ENST00000570115 UGGT2Q9NYU1 1516 aa19.09■□□□□ 0.65
SIN3A-214ENST00000570115 GLI2P10070 1586 aa19.06■□□□□ 0.64
SIN3A-214ENST00000570115 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
SIN3A-214ENST00000570115 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
SIN3A-214ENST00000570115 PPRC1Q5VV67 1664 aaKnown RBP19.01■□□□□ 0.63
SIN3A-214ENST00000570115 KDM4FA0A1W2PPD8 638 aa18.99■□□□□ 0.63
SIN3A-214ENST00000570115 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
SIN3A-214ENST00000570115 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
SIN3A-214ENST00000570115 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
SIN3A-214ENST00000570115 MAP3K4Q9Y6R4 1608 aa18.94■□□□□ 0.62
SIN3A-214ENST00000570115 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
SIN3A-214ENST00000570115 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
SIN3A-214ENST00000570115 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
SIN3A-214ENST00000570115 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
SIN3A-214ENST00000570115 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
SIN3A-214ENST00000570115 ABCA8O94911 1581 aa18.87■□□□□ 0.61
SIN3A-214ENST00000570115 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
SIN3A-214ENST00000570115 ADGRL1O94910 1474 aa18.79■□□□□ 0.6
SIN3A-214ENST00000570115 CD109Q6YHK3 1445 aa18.79■□□□□ 0.6
SIN3A-214ENST00000570115 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
SIN3A-214ENST00000570115 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
SIN3A-214ENST00000570115 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
SIN3A-214ENST00000570115 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
SIN3A-214ENST00000570115 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
SIN3A-214ENST00000570115 ATP10BO94823 1461 aa18.71■□□□□ 0.59
SIN3A-214ENST00000570115 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
SIN3A-214ENST00000570115 ARID3CA6NKF2 412 aa18.67■□□□□ 0.58
SIN3A-214ENST00000570115 EEA1Q15075 1411 aa18.66■□□□□ 0.58
SIN3A-214ENST00000570115 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
SIN3A-214ENST00000570115 ABCA9Q8IUA7 1624 aa18.63■□□□□ 0.57
SIN3A-214ENST00000570115 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
SIN3A-214ENST00000570115 PHLDB1Q86UU1 1377 aa18.62■□□□□ 0.57
SIN3A-214ENST00000570115 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.56
SIN3A-214ENST00000570115 HECW2Q9P2P5 1572 aa18.56■□□□□ 0.56
SIN3A-214ENST00000570115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
SIN3A-214ENST00000570115 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
SIN3A-214ENST00000570115 FHOD3Q2V2M9 1422 aa18.56■□□□□ 0.56
SIN3A-214ENST00000570115 KIF21BO75037 1637 aa18.56■□□□□ 0.56
SIN3A-214ENST00000570115 NEO1Q92859 1461 aa18.55■□□□□ 0.56
SIN3A-214ENST00000570115 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
SIN3A-214ENST00000570115 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
SIN3A-214ENST00000570115 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
SIN3A-214ENST00000570115 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
SIN3A-214ENST00000570115 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
SIN3A-214ENST00000570115 FRMPD1Q5SYB0 1578 aa18.47■□□□□ 0.55
SIN3A-214ENST00000570115 ADAMTSL3P82987 1691 aa18.44■□□□□ 0.54
SIN3A-214ENST00000570115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.43■□□□□ 0.548e-8■■■□□ 18.8
SIN3A-214ENST00000570115 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
SIN3A-214ENST00000570115 FANCAO15360 1455 aa18.41■□□□□ 0.54
SIN3A-214ENST00000570115 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
SIN3A-214ENST00000570115 PTPRMP28827 1452 aa18.41■□□□□ 0.54
SIN3A-214ENST00000570115 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
SIN3A-214ENST00000570115 CFAP74Q9C0B2 1584 aa18.39■□□□□ 0.53
SIN3A-214ENST00000570115 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
SIN3A-214ENST00000570115 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
SIN3A-214ENST00000570115 ARID4BQ4LE39 1312 aaPredicted RBP18.37■□□□□ 0.53
SIN3A-214ENST00000570115 CDK13Q14004 1512 aaKnown RBP18.37■□□□□ 0.53
SIN3A-214ENST00000570115 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
SIN3A-214ENST00000570115 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
SIN3A-214ENST00000570115 FMN1Q68DA7 1419 aa18.34■□□□□ 0.53
SIN3A-214ENST00000570115 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
SIN3A-214ENST00000570115 MADDQ8WXG6 1647 aa18.33■□□□□ 0.52
SIN3A-214ENST00000570115 PLCH2O75038 1416 aa18.32■□□□□ 0.52
SIN3A-214ENST00000570115 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
SIN3A-214ENST00000570115 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
SIN3A-214ENST00000570115 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
SIN3A-214ENST00000570115 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
SIN3A-214ENST00000570115 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
SIN3A-214ENST00000570115 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
SIN3A-214ENST00000570115 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
SIN3A-214ENST00000570115 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
SIN3A-214ENST00000570115 POGZQ7Z3K3 1410 aa18.28■□□□□ 0.52
SIN3A-214ENST00000570115 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
SIN3A-214ENST00000570115 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms