RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
UBR1-210ENST00000569337 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
UBR1-210ENST00000569337 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
UBR1-210ENST00000569337 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
UBR1-210ENST00000569337 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
UBR1-210ENST00000569337 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
UBR1-210ENST00000569337 RAPGEF2Q9Y4G8 1499 aa15.73■□□□□ 0.11
UBR1-210ENST00000569337 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
UBR1-210ENST00000569337 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
UBR1-210ENST00000569337 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
UBR1-210ENST00000569337 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
UBR1-210ENST00000569337 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
UBR1-210ENST00000569337 PTPRGP23470 1445 aa15.63■□□□□ 0.09
UBR1-210ENST00000569337 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
UBR1-210ENST00000569337 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
UBR1-210ENST00000569337 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
UBR1-210ENST00000569337 EEA1Q15075 1411 aa15.59■□□□□ 0.09
UBR1-210ENST00000569337 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
UBR1-210ENST00000569337 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
UBR1-210ENST00000569337 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
UBR1-210ENST00000569337 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
UBR1-210ENST00000569337 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
UBR1-210ENST00000569337 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
UBR1-210ENST00000569337 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
UBR1-210ENST00000569337 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
UBR1-210ENST00000569337 MAPKBP1O60336 1514 aa15.46■□□□□ 0.07
UBR1-210ENST00000569337 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
UBR1-210ENST00000569337 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.06
UBR1-210ENST00000569337 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
UBR1-210ENST00000569337 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
UBR1-210ENST00000569337 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
UBR1-210ENST00000569337 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
UBR1-210ENST00000569337 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
UBR1-210ENST00000569337 UBTFP17480 764 aaKnown RBP15.39■□□□□ 0.05
UBR1-210ENST00000569337 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
UBR1-210ENST00000569337 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
UBR1-210ENST00000569337 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
UBR1-210ENST00000569337 KIF21BO75037 1637 aa15.36■□□□□ 0.05
UBR1-210ENST00000569337 KIF13AQ9H1H9 1805 aa15.34■□□□□ 0.05
UBR1-210ENST00000569337 ABCA8O94911 1581 aa15.32■□□□□ 0.04
UBR1-210ENST00000569337 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
UBR1-210ENST00000569337 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
UBR1-210ENST00000569337 ZCCHC11Q5TAX3 1644 aaKnown RBP15.29■□□□□ 0.04
UBR1-210ENST00000569337 FHOD3Q2V2M9 1422 aa15.29■□□□□ 0.04
UBR1-210ENST00000569337 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
UBR1-210ENST00000569337 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
UBR1-210ENST00000569337 WDR7Q9Y4E6 1490 aa15.27■□□□□ 0.04
UBR1-210ENST00000569337 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
UBR1-210ENST00000569337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
UBR1-210ENST00000569337 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
UBR1-210ENST00000569337 GLI2P10070 1586 aa15.26■□□□□ 0.03
UBR1-210ENST00000569337 ATP10BO94823 1461 aa15.25■□□□□ 0.03
UBR1-210ENST00000569337 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
UBR1-210ENST00000569337 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.02
UBR1-210ENST00000569337 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
UBR1-210ENST00000569337 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
UBR1-210ENST00000569337 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
UBR1-210ENST00000569337 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
UBR1-210ENST00000569337 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
UBR1-210ENST00000569337 TEX14Q8IWB6 1497 aa15.18■□□□□ 0.02
UBR1-210ENST00000569337 KDM6BO15054 1643 aa15.17■□□□□ 0.02
UBR1-210ENST00000569337 ARHGAP35Q9NRY4 1499 aa15.17■□□□□ 0.02
UBR1-210ENST00000569337 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
UBR1-210ENST00000569337 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
UBR1-210ENST00000569337 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
UBR1-210ENST00000569337 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
UBR1-210ENST00000569337 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
UBR1-210ENST00000569337 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
UBR1-210ENST00000569337 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
UBR1-210ENST00000569337 CLIP1P30622 1438 aa15.07■□□□□ 0
UBR1-210ENST00000569337 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
UBR1-210ENST00000569337 HECW1Q76N89 1606 aa15.04■□□□□ -0
UBR1-210ENST00000569337 ABCA9Q8IUA7 1624 aa15.04■□□□□ -0
UBR1-210ENST00000569337 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
UBR1-210ENST00000569337 CEP162Q5TB80 1403 aa15.03■□□□□ -0
UBR1-210ENST00000569337 CASKIN1Q8WXD9 1431 aa15□□□□□ -0.01
UBR1-210ENST00000569337 NEO1Q92859 1461 aa15□□□□□ -0.01
UBR1-210ENST00000569337 ARAP3Q8WWN8 1544 aa14.99□□□□□ -0.01
UBR1-210ENST00000569337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
UBR1-210ENST00000569337 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
UBR1-210ENST00000569337 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
UBR1-210ENST00000569337 TROQ12816 1431 aaPredicted RBP14.97□□□□□ -0.01
UBR1-210ENST00000569337 FANCAO15360 1455 aa14.95□□□□□ -0.02
UBR1-210ENST00000569337 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
UBR1-210ENST00000569337 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
UBR1-210ENST00000569337 PLCH2O75038 1416 aa14.94□□□□□ -0.02
UBR1-210ENST00000569337 AKNAQ7Z591 1439 aa14.94□□□□□ -0.02
UBR1-210ENST00000569337 EFCAB2Q5VUJ9 269 aa14.94□□□□□ -0.02
UBR1-210ENST00000569337 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
UBR1-210ENST00000569337 TTC37Q6PGP7 1564 aa14.93□□□□□ -0.02
UBR1-210ENST00000569337 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
UBR1-210ENST00000569337 KIF14Q15058 1648 aa14.89□□□□□ -0.03
UBR1-210ENST00000569337 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
UBR1-210ENST00000569337 CFAP74Q9C0B2 1584 aa14.88□□□□□ -0.03
UBR1-210ENST00000569337 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
UBR1-210ENST00000569337 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
UBR1-210ENST00000569337 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
UBR1-210ENST00000569337 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
UBR1-210ENST00000569337 ARHGAP5Q13017 1502 aa14.84□□□□□ -0.03
UBR1-210ENST00000569337 FRMPD1Q5SYB0 1578 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms