RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 JPH4Q96JJ6 628 aa34.51■■■■□ 3.12
ABCA3-206ENST00000569062 PRG4Q92954 1404 aaPredicted RBP34.49■■■■□ 3.11
ABCA3-206ENST00000569062 KIAA0586Q9BVV6 1533 aa34.44■■■■□ 3.1
ABCA3-206ENST00000569062 TRHP20396 242 aaPredicted RBP34.4■■■■□ 3.1
ABCA3-206ENST00000569062 RAPGEF2Q9Y4G8 1499 aa34.27■■■■□ 3.08
ABCA3-206ENST00000569062 IQGAP2Q13576 1575 aa34.21■■■■□ 3.07
ABCA3-206ENST00000569062 ADCY10Q96PN6 1610 aa34.07■■■■□ 3.04
ABCA3-206ENST00000569062 PRXQ9BXM0 1461 aa34.06■■■■□ 3.04
ABCA3-206ENST00000569062 CARMIL2Q6F5E8 1435 aa34.05■■■■□ 3.04
ABCA3-206ENST00000569062 CTTNBP2Q8WZ74 1663 aa34.04■■■■□ 3.04
ABCA3-206ENST00000569062 DISP1Q96F81 1524 aa34.01■■■■□ 3.04
ABCA3-206ENST00000569062 PTPRGP23470 1445 aa34.01■■■■□ 3.03
ABCA3-206ENST00000569062 TTBK1Q5TCY1 1321 aaPredicted RBP34.01■■■■□ 3.03
ABCA3-206ENST00000569062 UGGT2Q9NYU1 1516 aa34■■■■□ 3.03
ABCA3-206ENST00000569062 TNIKQ9UKE5 1360 aa33.99■■■■□ 3.03
ABCA3-206ENST00000569062 NPM1P06748 294 aaKnown RBP eCLIP33.93■■■■□ 3.02
ABCA3-206ENST00000569062 KIF13AQ9H1H9 1805 aa33.93■■■■□ 3.02
ABCA3-206ENST00000569062 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
ABCA3-206ENST00000569062 KIAA0556O60303 1618 aa33.91■■■■□ 3.02
ABCA3-206ENST00000569062 MAPKBP1O60336 1514 aa33.88■■■■□ 3.01
ABCA3-206ENST00000569062 EEA1Q15075 1411 aa33.84■■■■□ 3.01
ABCA3-206ENST00000569062 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
ABCA3-206ENST00000569062 ABCC10Q5T3U5 1492 aa33.78■■■■□ 3
ABCA3-206ENST00000569062 FAM9AQ8IZU1 332 aaPredicted RBP33.78■■■■□ 3
ABCA3-206ENST00000569062 UACAQ9BZF9 1416 aa33.78■■■■□ 3
ABCA3-206ENST00000569062 ABCC2Q92887 1545 aa33.77■■■■□ 3
ABCA3-206ENST00000569062 UHRF1BP1LA0JNW5 1464 aa33.76■■■■□ 3
ABCA3-206ENST00000569062 DIP2BQ9P265 1576 aa33.75■■■□□ 2.99
ABCA3-206ENST00000569062 GOLGA3Q08378 1498 aa33.74■■■□□ 2.99
ABCA3-206ENST00000569062 FAM69CQ0P6D2 419 aa33.73■■■□□ 2.99
ABCA3-206ENST00000569062 KDM5BQ9UGL1 1544 aa33.62■■■□□ 2.97
ABCA3-206ENST00000569062 PLB1Q6P1J6 1458 aa33.62■■■□□ 2.97
ABCA3-206ENST00000569062 ASXL2Q76L83 1435 aa33.61■■■□□ 2.97
ABCA3-206ENST00000569062 ZCCHC11Q5TAX3 1644 aaKnown RBP33.61■■■□□ 2.97
ABCA3-206ENST00000569062 KIF21BO75037 1637 aa33.6■■■□□ 2.97
ABCA3-206ENST00000569062 ABCA8O94911 1581 aa33.56■■■□□ 2.96
ABCA3-206ENST00000569062 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
ABCA3-206ENST00000569062 SAMD9Q5K651 1589 aa33.55■■■□□ 2.96
ABCA3-206ENST00000569062 TSPOAP1O95153 1857 aa33.55■■■□□ 2.96
ABCA3-206ENST00000569062 RANGAP1P46060 587 aaPredicted RBP33.46■■■□□ 2.95
ABCA3-206ENST00000569062 GLI2P10070 1586 aa33.46■■■□□ 2.95
ABCA3-206ENST00000569062 EPRSP07814 1512 aaKnown RBP33.42■■■□□ 2.94
ABCA3-206ENST00000569062 EHMT2Q96KQ7 1210 aa33.41■■■□□ 2.94
ABCA3-206ENST00000569062 PPRC1Q5VV67 1664 aaKnown RBP33.37■■■□□ 2.93
ABCA3-206ENST00000569062 WDR7Q9Y4E6 1490 aa33.36■■■□□ 2.93
ABCA3-206ENST00000569062 MAP3K4Q9Y6R4 1608 aa33.33■■■□□ 2.93
ABCA3-206ENST00000569062 FHOD3Q2V2M9 1422 aa33.33■■■□□ 2.93
ABCA3-206ENST00000569062 KDM6BO15054 1643 aa33.31■■■□□ 2.92
ABCA3-206ENST00000569062 RAPGEF6Q8TEU7 1601 aa33.31■■■□□ 2.92
ABCA3-206ENST00000569062 ARID3CA6NKF2 412 aa33.3■■■□□ 2.92
ABCA3-206ENST00000569062 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
ABCA3-206ENST00000569062 EFCAB5A4FU69 1503 aa33.28■■■□□ 2.92
ABCA3-206ENST00000569062 ATP10BO94823 1461 aa33.27■■■□□ 2.92
ABCA3-206ENST00000569062 KCNH8Q96L42 1107 aa33.22■■■□□ 2.91
ABCA3-206ENST00000569062 NUP153P49790 1475 aaKnown RBP33.18■■■□□ 2.9
ABCA3-206ENST00000569062 CFAP43Q8NDM7 1665 aa33.17■■■□□ 2.9
ABCA3-206ENST00000569062 TEX14Q8IWB6 1497 aa33.13■■■□□ 2.89
ABCA3-206ENST00000569062 ARHGAP35Q9NRY4 1499 aa33.1■■■□□ 2.89
ABCA3-206ENST00000569062 CD109Q6YHK3 1445 aa33.1■■■□□ 2.89
ABCA3-206ENST00000569062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.09■■■□□ 2.89
ABCA3-206ENST00000569062 HNRNPUL2Q1KMD3 747 aaKnown RBP33.09■■■□□ 2.89
ABCA3-206ENST00000569062 COL17A1Q9UMD9 1497 aaPredicted RBP33.06■■■□□ 2.88
ABCA3-206ENST00000569062 MAGI3Q5TCQ9 1506 aa33.05■■■□□ 2.88
ABCA3-206ENST00000569062 ABCA9Q8IUA7 1624 aa33■■■□□ 2.87
ABCA3-206ENST00000569062 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
ABCA3-206ENST00000569062 CDK13Q14004 1512 aaKnown RBP32.93■■■□□ 2.86
ABCA3-206ENST00000569062 AEBP2Q6ZN18 517 aaPredicted RBP32.93■■■□□ 2.86
ABCA3-206ENST00000569062 PLEKHD1A6NEE1 506 aa32.91■■■□□ 2.86
ABCA3-206ENST00000569062 HECW1Q76N89 1606 aa32.9■■■□□ 2.86
ABCA3-206ENST00000569062 ATP1B4Q9UN42 357 aaPredicted RBP32.88■■■□□ 2.85
ABCA3-206ENST00000569062 LRRIQ1Q96JM4 1722 aa32.81■■■□□ 2.84
ABCA3-206ENST00000569062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.79■■■□□ 2.84
ABCA3-206ENST00000569062 ARAP3Q8WWN8 1544 aa32.78■■■□□ 2.84
ABCA3-206ENST00000569062 TTC37Q6PGP7 1564 aa32.75■■■□□ 2.83
ABCA3-206ENST00000569062 KDM4FA0A1W2PPD8 638 aa32.74■■■□□ 2.83
ABCA3-206ENST00000569062 PCF11O94913 1555 aaKnown RBP32.74■■■□□ 2.83
ABCA3-206ENST00000569062 CLIP1P30622 1438 aa32.73■■■□□ 2.83
ABCA3-206ENST00000569062 NEO1Q92859 1461 aa32.73■■■□□ 2.83
ABCA3-206ENST00000569062 PHLDB1Q86UU1 1377 aa32.71■■■□□ 2.83
ABCA3-206ENST00000569062 CASKIN1Q8WXD9 1431 aa32.68■■■□□ 2.82
ABCA3-206ENST00000569062 CDK11AQ9UQ88 783 aaPredicted RBP32.65■■■□□ 2.82
ABCA3-206ENST00000569062 KIF14Q15058 1648 aa32.63■■■□□ 2.81
ABCA3-206ENST00000569062 FANCAO15360 1455 aa32.62■■■□□ 2.81
ABCA3-206ENST00000569062 RAPGEF3O95398 923 aa32.62■■■□□ 2.81
ABCA3-206ENST00000569062 CFAP74Q9C0B2 1584 aa32.61■■■□□ 2.81
ABCA3-206ENST00000569062 ADGRL1O94910 1474 aa32.61■■■□□ 2.81
ABCA3-206ENST00000569062 FRMPD1Q5SYB0 1578 aa32.6■■■□□ 2.81
ABCA3-206ENST00000569062 TROQ12816 1431 aaPredicted RBP32.6■■■□□ 2.81
ABCA3-206ENST00000569062 AKNAQ7Z591 1439 aa32.59■■■□□ 2.81
ABCA3-206ENST00000569062 CCDC18Q5T9S5 1454 aa32.58■■■□□ 2.81
ABCA3-206ENST00000569062 FYCO1Q9BQS8 1478 aa32.58■■■□□ 2.81
ABCA3-206ENST00000569062 MYO5CQ9NQX4 1742 aa32.57■■■□□ 2.8
ABCA3-206ENST00000569062 PLCH2O75038 1416 aa32.55■■■□□ 2.8
ABCA3-206ENST00000569062 RICTORQ6R327 1708 aa32.53■■■□□ 2.8
ABCA3-206ENST00000569062 DENND4BO75064 1496 aaPredicted RBP32.51■■■□□ 2.79
ABCA3-206ENST00000569062 CEP162Q5TB80 1403 aa32.5■■■□□ 2.79
ABCA3-206ENST00000569062 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
ABCA3-206ENST00000569062 CDC42BPBQ9Y5S2 1711 aa32.41■■■□□ 2.78
ABCA3-206ENST00000569062 EFCAB2Q5VUJ9 269 aa32.4■■■□□ 2.78
ABCA3-206ENST00000569062 SCAPERQ9BY12 1400 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms