RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
SNAPC5-208ENST00000568875 KIAA0586Q9BVV6 1533 aa19.27■□□□□ 0.68
SNAPC5-208ENST00000568875 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.68
SNAPC5-208ENST00000568875 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
SNAPC5-208ENST00000568875 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
SNAPC5-208ENST00000568875 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
SNAPC5-208ENST00000568875 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
SNAPC5-208ENST00000568875 IQGAP2Q13576 1575 aa19.1■□□□□ 0.65
SNAPC5-208ENST00000568875 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
SNAPC5-208ENST00000568875 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
SNAPC5-208ENST00000568875 PTPRGP23470 1445 aa19.03■□□□□ 0.64
SNAPC5-208ENST00000568875 EEA1Q15075 1411 aa19.03■□□□□ 0.64
SNAPC5-208ENST00000568875 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
SNAPC5-208ENST00000568875 DISP1Q96F81 1524 aa19.02■□□□□ 0.64
SNAPC5-208ENST00000568875 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.64
SNAPC5-208ENST00000568875 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
SNAPC5-208ENST00000568875 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
SNAPC5-208ENST00000568875 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNAPC5-208ENST00000568875 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
SNAPC5-208ENST00000568875 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
SNAPC5-208ENST00000568875 KIAA0556O60303 1618 aa18.91■□□□□ 0.62
SNAPC5-208ENST00000568875 UACAQ9BZF9 1416 aa18.89■□□□□ 0.62
SNAPC5-208ENST00000568875 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
SNAPC5-208ENST00000568875 MAPKBP1O60336 1514 aa18.88■□□□□ 0.61
SNAPC5-208ENST00000568875 UHRF1BP1LA0JNW5 1464 aa18.88■□□□□ 0.61
SNAPC5-208ENST00000568875 ABCC2Q92887 1545 aa18.86■□□□□ 0.61
SNAPC5-208ENST00000568875 ABCC10Q5T3U5 1492 aa18.84■□□□□ 0.61
SNAPC5-208ENST00000568875 FAM69CQ0P6D2 419 aa18.83■□□□□ 0.61
SNAPC5-208ENST00000568875 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
SNAPC5-208ENST00000568875 KIF21BO75037 1637 aa18.82■□□□□ 0.6
SNAPC5-208ENST00000568875 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
SNAPC5-208ENST00000568875 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
SNAPC5-208ENST00000568875 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
SNAPC5-208ENST00000568875 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
SNAPC5-208ENST00000568875 ASXL2Q76L83 1435 aa18.76■□□□□ 0.59
SNAPC5-208ENST00000568875 SAMD9Q5K651 1589 aa18.75■□□□□ 0.59
SNAPC5-208ENST00000568875 ABCA8O94911 1581 aa18.75■□□□□ 0.59
SNAPC5-208ENST00000568875 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
SNAPC5-208ENST00000568875 UBTFP17480 764 aaKnown RBP18.73■□□□□ 0.59
SNAPC5-208ENST00000568875 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
SNAPC5-208ENST00000568875 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.59
SNAPC5-208ENST00000568875 GLI2P10070 1586 aa18.66■□□□□ 0.58
SNAPC5-208ENST00000568875 EPRSP07814 1512 aaKnown RBP18.65■□□□□ 0.58
SNAPC5-208ENST00000568875 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
SNAPC5-208ENST00000568875 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
SNAPC5-208ENST00000568875 ATP10BO94823 1461 aa18.63■□□□□ 0.57
SNAPC5-208ENST00000568875 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
SNAPC5-208ENST00000568875 TSPOAP1O95153 1857 aa18.61■□□□□ 0.57
SNAPC5-208ENST00000568875 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
SNAPC5-208ENST00000568875 RAPGEF6Q8TEU7 1601 aa18.59■□□□□ 0.57
SNAPC5-208ENST00000568875 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
SNAPC5-208ENST00000568875 NUP153P49790 1475 aaKnown RBP18.56■□□□□ 0.56
SNAPC5-208ENST00000568875 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
SNAPC5-208ENST00000568875 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
SNAPC5-208ENST00000568875 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
SNAPC5-208ENST00000568875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
SNAPC5-208ENST00000568875 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
SNAPC5-208ENST00000568875 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
SNAPC5-208ENST00000568875 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
SNAPC5-208ENST00000568875 KDM6BO15054 1643 aa18.49■□□□□ 0.55
SNAPC5-208ENST00000568875 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
SNAPC5-208ENST00000568875 TEX14Q8IWB6 1497 aa18.47■□□□□ 0.55
SNAPC5-208ENST00000568875 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
SNAPC5-208ENST00000568875 CFAP43Q8NDM7 1665 aa18.46■□□□□ 0.55
SNAPC5-208ENST00000568875 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
SNAPC5-208ENST00000568875 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
SNAPC5-208ENST00000568875 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
SNAPC5-208ENST00000568875 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
SNAPC5-208ENST00000568875 CLIP1P30622 1438 aa18.39■□□□□ 0.53
SNAPC5-208ENST00000568875 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
SNAPC5-208ENST00000568875 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
SNAPC5-208ENST00000568875 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
SNAPC5-208ENST00000568875 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
SNAPC5-208ENST00000568875 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
SNAPC5-208ENST00000568875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNAPC5-208ENST00000568875 ARAP3Q8WWN8 1544 aa18.31■□□□□ 0.52
SNAPC5-208ENST00000568875 NEO1Q92859 1461 aa18.29■□□□□ 0.52
SNAPC5-208ENST00000568875 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
SNAPC5-208ENST00000568875 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
SNAPC5-208ENST00000568875 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.51
SNAPC5-208ENST00000568875 CEP162Q5TB80 1403 aa18.27■□□□□ 0.51
SNAPC5-208ENST00000568875 HRCP23327 699 aa18.26■□□□□ 0.51
SNAPC5-208ENST00000568875 AEBP2Q6ZN18 517 aaPredicted RBP18.26■□□□□ 0.51
SNAPC5-208ENST00000568875 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
SNAPC5-208ENST00000568875 TTC37Q6PGP7 1564 aa18.26■□□□□ 0.51
SNAPC5-208ENST00000568875 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
SNAPC5-208ENST00000568875 CCDC18Q5T9S5 1454 aa18.25■□□□□ 0.51
SNAPC5-208ENST00000568875 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
SNAPC5-208ENST00000568875 PLCH2O75038 1416 aa18.24■□□□□ 0.51
SNAPC5-208ENST00000568875 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
SNAPC5-208ENST00000568875 FANCAO15360 1455 aa18.22■□□□□ 0.51
SNAPC5-208ENST00000568875 KIF14Q15058 1648 aa18.2■□□□□ 0.5
SNAPC5-208ENST00000568875 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
SNAPC5-208ENST00000568875 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
SNAPC5-208ENST00000568875 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
SNAPC5-208ENST00000568875 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
SNAPC5-208ENST00000568875 FRMPD1Q5SYB0 1578 aa18.14■□□□□ 0.49
SNAPC5-208ENST00000568875 MYO5CQ9NQX4 1742 aa18.14■□□□□ 0.49
SNAPC5-208ENST00000568875 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
SNAPC5-208ENST00000568875 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms