RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 JPH4Q96JJ6 628 aa14.66□□□□□ -0.06
TSC2-223ENST00000568566 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
TSC2-223ENST00000568566 FAM69CQ0P6D2 419 aa14.64□□□□□ -0.07
TSC2-223ENST00000568566 ADCY10Q96PN6 1610 aa14.63□□□□□ -0.07
TSC2-223ENST00000568566 DIP2BQ9P265 1576 aa14.63□□□□□ -0.07
TSC2-223ENST00000568566 MAPKBP1O60336 1514 aa14.62□□□□□ -0.07
TSC2-223ENST00000568566 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
TSC2-223ENST00000568566 KDM6BO15054 1643 aa14.57□□□□□ -0.08
TSC2-223ENST00000568566 TSPOAP1O95153 1857 aa14.56□□□□□ -0.08
TSC2-223ENST00000568566 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
TSC2-223ENST00000568566 KDM4FA0A1W2PPD8 638 aa14.51□□□□□ -0.09
TSC2-223ENST00000568566 CUL7Q14999 1698 aa14.5□□□□□ -0.09
TSC2-223ENST00000568566 IGF1RP08069 1367 aa14.48□□□□□ -0.09
TSC2-223ENST00000568566 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
TSC2-223ENST00000568566 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
TSC2-223ENST00000568566 PTPRGP23470 1445 aa14.46□□□□□ -0.09
TSC2-223ENST00000568566 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
TSC2-223ENST00000568566 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
TSC2-223ENST00000568566 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
TSC2-223ENST00000568566 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
TSC2-223ENST00000568566 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
TSC2-223ENST00000568566 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
TSC2-223ENST00000568566 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
TSC2-223ENST00000568566 PLB1Q6P1J6 1458 aa14.38□□□□□ -0.11
TSC2-223ENST00000568566 GLI2P10070 1586 aa14.38□□□□□ -0.11
TSC2-223ENST00000568566 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
TSC2-223ENST00000568566 ILDR1Q86SU0 546 aaPredicted RBP14.35□□□□□ -0.11
TSC2-223ENST00000568566 UHRF1BP1LA0JNW5 1464 aa14.35□□□□□ -0.11
TSC2-223ENST00000568566 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
TSC2-223ENST00000568566 DISP1Q96F81 1524 aa14.34□□□□□ -0.11
TSC2-223ENST00000568566 COL17A1Q9UMD9 1497 aaPredicted RBP14.32□□□□□ -0.12
TSC2-223ENST00000568566 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
TSC2-223ENST00000568566 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
TSC2-223ENST00000568566 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
TSC2-223ENST00000568566 KDM5BQ9UGL1 1544 aa14.3□□□□□ -0.12
TSC2-223ENST00000568566 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
TSC2-223ENST00000568566 KIAA0556O60303 1618 aa14.27□□□□□ -0.12
TSC2-223ENST00000568566 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
TSC2-223ENST00000568566 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
TSC2-223ENST00000568566 CHIC1Q5VXU3 224 aa14.25□□□□□ -0.13
TSC2-223ENST00000568566 RAPGEF2Q9Y4G8 1499 aa14.24□□□□□ -0.13
TSC2-223ENST00000568566 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
TSC2-223ENST00000568566 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
TSC2-223ENST00000568566 CFAP43Q8NDM7 1665 aa14.16□□□□□ -0.14
TSC2-223ENST00000568566 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
TSC2-223ENST00000568566 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
TSC2-223ENST00000568566 ABCA8O94911 1581 aa14.14□□□□□ -0.15
TSC2-223ENST00000568566 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
TSC2-223ENST00000568566 KIF21BO75037 1637 aa14.13□□□□□ -0.15
TSC2-223ENST00000568566 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
TSC2-223ENST00000568566 ARID3CA6NKF2 412 aa14.08□□□□□ -0.16
TSC2-223ENST00000568566 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
TSC2-223ENST00000568566 ARAP3Q8WWN8 1544 aa14.05□□□□□ -0.16
TSC2-223ENST00000568566 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
TSC2-223ENST00000568566 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
TSC2-223ENST00000568566 ATP10BO94823 1461 aa14□□□□□ -0.17
TSC2-223ENST00000568566 P3H3Q8IVL6 736 aa14□□□□□ -0.17
TSC2-223ENST00000568566 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
TSC2-223ENST00000568566 PTPRMP28827 1452 aa13.99□□□□□ -0.17
TSC2-223ENST00000568566 RAPGEF3O95398 923 aa13.97□□□□□ -0.17
TSC2-223ENST00000568566 FBXO41Q8TF61 875 aa13.97□□□□□ -0.17
TSC2-223ENST00000568566 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
TSC2-223ENST00000568566 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
TSC2-223ENST00000568566 MADDQ8WXG6 1647 aa13.96□□□□□ -0.17
TSC2-223ENST00000568566 RAPGEF6Q8TEU7 1601 aa13.95□□□□□ -0.18
TSC2-223ENST00000568566 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
TSC2-223ENST00000568566 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
TSC2-223ENST00000568566 NEO1Q92859 1461 aa13.94□□□□□ -0.18
TSC2-223ENST00000568566 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
TSC2-223ENST00000568566 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
TSC2-223ENST00000568566 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
TSC2-223ENST00000568566 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
TSC2-223ENST00000568566 ARHGEF40Q8TER5 1519 aa13.91□□□□□ -0.18
TSC2-223ENST00000568566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
TSC2-223ENST00000568566 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
TSC2-223ENST00000568566 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
TSC2-223ENST00000568566 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
TSC2-223ENST00000568566 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
TSC2-223ENST00000568566 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
TSC2-223ENST00000568566 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
TSC2-223ENST00000568566 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
TSC2-223ENST00000568566 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
TSC2-223ENST00000568566 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
TSC2-223ENST00000568566 FANCAO15360 1455 aa13.83□□□□□ -0.2
TSC2-223ENST00000568566 SIGLEC1Q9BZZ2 1709 aa13.83□□□□□ -0.2
TSC2-223ENST00000568566 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.2
TSC2-223ENST00000568566 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
TSC2-223ENST00000568566 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
TSC2-223ENST00000568566 HSPA2P54652 639 aa13.82□□□□□ -0.2
TSC2-223ENST00000568566 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
TSC2-223ENST00000568566 ZFYVE16Q7Z3T8 1539 aa13.81□□□□□ -0.2
TSC2-223ENST00000568566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.81□□□□□ -0.2
TSC2-223ENST00000568566 EEA1Q15075 1411 aa13.81□□□□□ -0.2
TSC2-223ENST00000568566 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
TSC2-223ENST00000568566 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
TSC2-223ENST00000568566 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
TSC2-223ENST00000568566 EFCAB5A4FU69 1503 aa13.79□□□□□ -0.2
TSC2-223ENST00000568566 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
TSC2-223ENST00000568566 HECW1Q76N89 1606 aa13.76□□□□□ -0.21
TSC2-223ENST00000568566 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms