RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 PPP4R2Q9NY27 417 aa21.81■■□□□ 1.08
TSC2-222ENST00000568454 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
TSC2-222ENST00000568454 SUPT16HQ9Y5B9 1047 aaKnown RBP21.8■■□□□ 1.08
TSC2-222ENST00000568454 NAP1L5Q96NT1 182 aaPredicted RBP21.77■■□□□ 1.08
TSC2-222ENST00000568454 PTMAP06454 111 aaKnown RBP21.77■■□□□ 1.08
TSC2-222ENST00000568454 CLIP1P30622 1438 aa21.75■■□□□ 1.07
TSC2-222ENST00000568454 STAG3Q9UJ98 1225 aa21.74■■□□□ 1.07
TSC2-222ENST00000568454 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
TSC2-222ENST00000568454 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
TSC2-222ENST00000568454 DNTTIP2Q5QJE6 756 aaKnown RBP21.7■■□□□ 1.06
TSC2-222ENST00000568454 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
TSC2-222ENST00000568454 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
TSC2-222ENST00000568454 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
TSC2-222ENST00000568454 CDK11BP21127 795 aaKnown RBP21.69■■□□□ 1.06
TSC2-222ENST00000568454 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
TSC2-222ENST00000568454 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
TSC2-222ENST00000568454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.66■■□□□ 1.063e-6■■■□□ 15.2
TSC2-222ENST00000568454 CASC1Q6TDU7 716 aa21.61■■□□□ 1.05
TSC2-222ENST00000568454 DEKP35659 375 aaKnown RBP21.6■■□□□ 1.05
TSC2-222ENST00000568454 ZRSR1Q15695 479 aaKnown RBP21.59■■□□□ 1.05
TSC2-222ENST00000568454 EEA1Q15075 1411 aa21.59■■□□□ 1.05
TSC2-222ENST00000568454 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
TSC2-222ENST00000568454 CEP162Q5TB80 1403 aa21.58■■□□□ 1.04
TSC2-222ENST00000568454 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
TSC2-222ENST00000568454 L1TD1Q5T7N2 865 aaKnown RBP21.55■■□□□ 1.04
TSC2-222ENST00000568454 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
TSC2-222ENST00000568454 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
TSC2-222ENST00000568454 RRP7BPQ9NSQ0 103 aa21.53■■□□□ 1.04
TSC2-222ENST00000568454 FTSJ3Q8IY81 847 aaKnown RBP21.53■■□□□ 1.04
TSC2-222ENST00000568454 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
TSC2-222ENST00000568454 RGS3P49796 1198 aa21.5■■□□□ 1.03
TSC2-222ENST00000568454 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
TSC2-222ENST00000568454 KNSTRNQ9Y448 316 aa21.49■■□□□ 1.03
TSC2-222ENST00000568454 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
TSC2-222ENST00000568454 HSP90AB1P08238 724 aaKnown RBP21.45■■□□□ 1.02
TSC2-222ENST00000568454 CHMP4BQ9H444 224 aaKnown RBP21.44■■□□□ 1.02
TSC2-222ENST00000568454 GOLGA6L6A8MZA4 724 aa21.43■■□□□ 1.02
TSC2-222ENST00000568454 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
TSC2-222ENST00000568454 MS4A1P11836 297 aa21.42■■□□□ 1.02
TSC2-222ENST00000568454 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
TSC2-222ENST00000568454 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
TSC2-222ENST00000568454 MSNP26038 577 aaKnown RBP21.4■■□□□ 1.02
TSC2-222ENST00000568454 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
TSC2-222ENST00000568454 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
TSC2-222ENST00000568454 NRDCO43847 1150 aa21.39■■□□□ 1.02
TSC2-222ENST00000568454 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.02
TSC2-222ENST00000568454 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.02
TSC2-222ENST00000568454 PLCB2Q00722 1185 aa21.39■■□□□ 1.01
TSC2-222ENST00000568454 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
TSC2-222ENST00000568454 TIMELESSQ9UNS1 1208 aa21.34■■□□□ 1.01
TSC2-222ENST00000568454 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
TSC2-222ENST00000568454 TPRNQ4KMQ1 711 aa21.33■■□□□ 1.01
TSC2-222ENST00000568454 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1.01
TSC2-222ENST00000568454 NACADO15069 1562 aa21.33■■□□□ 1
TSC2-222ENST00000568454 RGL3Q3MIN7 710 aa21.31■■□□□ 1
TSC2-222ENST00000568454 NUDCQ9Y266 331 aa21.31■■□□□ 1
TSC2-222ENST00000568454 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
TSC2-222ENST00000568454 NEUROD2Q15784 382 aa21.28■■□□□ 1
TSC2-222ENST00000568454 PTMSP20962 102 aa21.27■■□□□ 1
TSC2-222ENST00000568454 CEP164Q9UPV0 1460 aa21.27■□□□□ 0.99
TSC2-222ENST00000568454 CFAP44Q96MT7 982 aa21.25■□□□□ 0.99
TSC2-222ENST00000568454 PNNQ9H307 717 aaKnown RBP21.24■□□□□ 0.99
TSC2-222ENST00000568454 TSHZ2Q9NRE2 1034 aa21.23■□□□□ 0.99
TSC2-222ENST00000568454 GOLGA6L4A6NEF3 574 aa21.22■□□□□ 0.99
TSC2-222ENST00000568454 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
TSC2-222ENST00000568454 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
TSC2-222ENST00000568454 PLEKHD1A6NEE1 506 aa21.19■□□□□ 0.98
TSC2-222ENST00000568454 GBP4Q96PP9 640 aa21.19■□□□□ 0.98
TSC2-222ENST00000568454 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
TSC2-222ENST00000568454 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
TSC2-222ENST00000568454 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
TSC2-222ENST00000568454 MCCP23508 829 aa21.17■□□□□ 0.98
TSC2-222ENST00000568454 CCNB3Q8WWL7 1395 aa21.16■□□□□ 0.98
TSC2-222ENST00000568454 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
TSC2-222ENST00000568454 FGD1P98174 961 aa21.16■□□□□ 0.98
TSC2-222ENST00000568454 KCNJ4P48050 445 aa21.14■□□□□ 0.97
TSC2-222ENST00000568454 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
TSC2-222ENST00000568454 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
TSC2-222ENST00000568454 C14orf37Q86TY3 774 aa21.13■□□□□ 0.97
TSC2-222ENST00000568454 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
TSC2-222ENST00000568454 IPO9Q96P70 1041 aaKnown RBP21.13■□□□□ 0.97
TSC2-222ENST00000568454 TMF1P82094 1093 aa21.12■□□□□ 0.97
TSC2-222ENST00000568454 DRC7Q8IY82 874 aa21.12■□□□□ 0.97
TSC2-222ENST00000568454 SPRYD3Q8NCJ5 442 aa21.11■□□□□ 0.97
TSC2-222ENST00000568454 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
TSC2-222ENST00000568454 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
TSC2-222ENST00000568454 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
TSC2-222ENST00000568454 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
TSC2-222ENST00000568454 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.08■□□□□ 0.97
TSC2-222ENST00000568454 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.96
TSC2-222ENST00000568454 GOLGA6L3A6NEY3 463 aa21.08■□□□□ 0.96
TSC2-222ENST00000568454 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
TSC2-222ENST00000568454 U2SURPO15042 1029 aaKnown RBP21.06■□□□□ 0.96
TSC2-222ENST00000568454 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
TSC2-222ENST00000568454 A0A0G2JS52 829 aa21.04■□□□□ 0.96
TSC2-222ENST00000568454 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
TSC2-222ENST00000568454 SYAP1Q96A49 352 aaPredicted RBP21.03■□□□□ 0.96
TSC2-222ENST00000568454 GZF1Q9H116 711 aaPredicted RBP21.03■□□□□ 0.96
TSC2-222ENST00000568454 HAP1P54257 671 aaPredicted RBP21.02■□□□□ 0.96
TSC2-222ENST00000568454 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms