RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 CUL7Q14999 1698 aa30.34■■■□□ 2.45
SCAMP5-218ENST00000568423 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
SCAMP5-218ENST00000568423 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
SCAMP5-218ENST00000568423 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
SCAMP5-218ENST00000568423 KIAA0586Q9BVV6 1533 aa30.24■■■□□ 2.43
SCAMP5-218ENST00000568423 NPM1P06748 294 aaKnown RBP eCLIP30.13■■■□□ 2.41
SCAMP5-218ENST00000568423 EEA1Q15075 1411 aa30.02■■■□□ 2.4
SCAMP5-218ENST00000568423 CARMIL2Q6F5E8 1435 aa30.02■■■□□ 2.4
SCAMP5-218ENST00000568423 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
SCAMP5-218ENST00000568423 IQGAP2Q13576 1575 aa29.97■■■□□ 2.39
SCAMP5-218ENST00000568423 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
SCAMP5-218ENST00000568423 PTPRGP23470 1445 aa29.96■■■□□ 2.39
SCAMP5-218ENST00000568423 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
SCAMP5-218ENST00000568423 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
SCAMP5-218ENST00000568423 ADCY10Q96PN6 1610 aa29.89■■■□□ 2.37
SCAMP5-218ENST00000568423 FAM69CQ0P6D2 419 aa29.87■■■□□ 2.37
SCAMP5-218ENST00000568423 MAPKBP1O60336 1514 aa29.84■■■□□ 2.37
SCAMP5-218ENST00000568423 ABCC10Q5T3U5 1492 aa29.81■■■□□ 2.36
SCAMP5-218ENST00000568423 KIF13AQ9H1H9 1805 aa29.81■■■□□ 2.36
SCAMP5-218ENST00000568423 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
SCAMP5-218ENST00000568423 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
SCAMP5-218ENST00000568423 KIF21BO75037 1637 aa29.79■■■□□ 2.36
SCAMP5-218ENST00000568423 DISP1Q96F81 1524 aa29.76■■■□□ 2.36
SCAMP5-218ENST00000568423 UGGT2Q9NYU1 1516 aa29.76■■■□□ 2.36
SCAMP5-218ENST00000568423 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
SCAMP5-218ENST00000568423 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
SCAMP5-218ENST00000568423 ABCC2Q92887 1545 aa29.71■■■□□ 2.35
SCAMP5-218ENST00000568423 DIP2BQ9P265 1576 aa29.69■■■□□ 2.34
SCAMP5-218ENST00000568423 UHRF1BP1LA0JNW5 1464 aa29.68■■■□□ 2.34
SCAMP5-218ENST00000568423 KIAA0556O60303 1618 aa29.66■■■□□ 2.34
SCAMP5-218ENST00000568423 GOLGA3Q08378 1498 aa29.65■■■□□ 2.34
SCAMP5-218ENST00000568423 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
SCAMP5-218ENST00000568423 ASXL2Q76L83 1435 aa29.6■■■□□ 2.33
SCAMP5-218ENST00000568423 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
SCAMP5-218ENST00000568423 KDM5BQ9UGL1 1544 aa29.53■■■□□ 2.32
SCAMP5-218ENST00000568423 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
SCAMP5-218ENST00000568423 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
SCAMP5-218ENST00000568423 GLI2P10070 1586 aa29.44■■■□□ 2.3
SCAMP5-218ENST00000568423 KDM6BO15054 1643 aa29.42■■■□□ 2.3
SCAMP5-218ENST00000568423 P3H3Q8IVL6 736 aa29.42■■■□□ 2.3
SCAMP5-218ENST00000568423 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
SCAMP5-218ENST00000568423 EPRSP07814 1512 aaKnown RBP29.39■■■□□ 2.3
SCAMP5-218ENST00000568423 ABCA8O94911 1581 aa29.36■■■□□ 2.29
SCAMP5-218ENST00000568423 WDR7Q9Y4E6 1490 aa29.35■■■□□ 2.29
SCAMP5-218ENST00000568423 RANGAP1P46060 587 aaPredicted RBP29.32■■■□□ 2.28
SCAMP5-218ENST00000568423 EHMT2Q96KQ7 1210 aa29.32■■■□□ 2.28
SCAMP5-218ENST00000568423 KCNH8Q96L42 1107 aa29.31■■■□□ 2.28
SCAMP5-218ENST00000568423 TEX14Q8IWB6 1497 aa29.29■■■□□ 2.28
SCAMP5-218ENST00000568423 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
SCAMP5-218ENST00000568423 MAP3K4Q9Y6R4 1608 aa29.26■■■□□ 2.27
SCAMP5-218ENST00000568423 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
SCAMP5-218ENST00000568423 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
SCAMP5-218ENST00000568423 ARID3CA6NKF2 412 aa29.24■■■□□ 2.27
SCAMP5-218ENST00000568423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
SCAMP5-218ENST00000568423 HNRNPUL2Q1KMD3 747 aaKnown RBP29.2■■■□□ 2.26
SCAMP5-218ENST00000568423 CD109Q6YHK3 1445 aa29.19■■■□□ 2.26
SCAMP5-218ENST00000568423 ATP10BO94823 1461 aa29.17■■■□□ 2.26
SCAMP5-218ENST00000568423 RAPGEF6Q8TEU7 1601 aa29.13■■■□□ 2.25
SCAMP5-218ENST00000568423 FHOD3Q2V2M9 1422 aa29.13■■■□□ 2.25
SCAMP5-218ENST00000568423 CFAP43Q8NDM7 1665 aa29.13■■■□□ 2.25
SCAMP5-218ENST00000568423 ARHGAP35Q9NRY4 1499 aa29.13■■■□□ 2.25
SCAMP5-218ENST00000568423 MAGI3Q5TCQ9 1506 aa29.1■■■□□ 2.25
SCAMP5-218ENST00000568423 COL17A1Q9UMD9 1497 aaPredicted RBP29.07■■■□□ 2.24
SCAMP5-218ENST00000568423 KDM4FA0A1W2PPD8 638 aa29.02■■■□□ 2.24
SCAMP5-218ENST00000568423 PLEKHD1A6NEE1 506 aa29.01■■■□□ 2.23
SCAMP5-218ENST00000568423 NUP153P49790 1475 aaKnown RBP29■■■□□ 2.23
SCAMP5-218ENST00000568423 CLIP1P30622 1438 aa29■■■□□ 2.23
SCAMP5-218ENST00000568423 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
SCAMP5-218ENST00000568423 LOC105371045A0A1W2PR82 267 aa28.95■■■□□ 2.22
SCAMP5-218ENST00000568423 ABCA9Q8IUA7 1624 aa28.93■■■□□ 2.22
SCAMP5-218ENST00000568423 PHLDB1Q86UU1 1377 aa28.92■■■□□ 2.22
SCAMP5-218ENST00000568423 ATP1B4Q9UN42 357 aaPredicted RBP28.91■■■□□ 2.22
SCAMP5-218ENST00000568423 FMN1Q68DA7 1419 aa28.9■■■□□ 2.22
SCAMP5-218ENST00000568423 ARAP3Q8WWN8 1544 aa28.86■■■□□ 2.21
SCAMP5-218ENST00000568423 PCF11O94913 1555 aaKnown RBP28.86■■■□□ 2.21
SCAMP5-218ENST00000568423 HECW1Q76N89 1606 aa28.85■■■□□ 2.21
SCAMP5-218ENST00000568423 ADGRL1O94910 1474 aa28.84■■■□□ 2.21
SCAMP5-218ENST00000568423 NEO1Q92859 1461 aa28.82■■■□□ 2.2
SCAMP5-218ENST00000568423 CDK11AQ9UQ88 783 aaPredicted RBP28.8■■■□□ 2.2
SCAMP5-218ENST00000568423 LRRIQ1Q96JM4 1722 aa28.79■■■□□ 2.2
SCAMP5-218ENST00000568423 CDK13Q14004 1512 aaKnown RBP28.75■■■□□ 2.19
SCAMP5-218ENST00000568423 RAPGEF3O95398 923 aa28.75■■■□□ 2.19
SCAMP5-218ENST00000568423 FYCO1Q9BQS8 1478 aa28.74■■■□□ 2.19
SCAMP5-218ENST00000568423 CASKIN1Q8WXD9 1431 aa28.74■■■□□ 2.19
SCAMP5-218ENST00000568423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.7■■■□□ 2.19
SCAMP5-218ENST00000568423 FANCAO15360 1455 aa28.67■■■□□ 2.18
SCAMP5-218ENST00000568423 AKNAQ7Z591 1439 aa28.66■■■□□ 2.18
SCAMP5-218ENST00000568423 CFAP74Q9C0B2 1584 aa28.66■■■□□ 2.18
SCAMP5-218ENST00000568423 DENND4BO75064 1496 aaPredicted RBP28.64■■■□□ 2.17
SCAMP5-218ENST00000568423 TTC37Q6PGP7 1564 aa28.62■■■□□ 2.17
SCAMP5-218ENST00000568423 CCDC18Q5T9S5 1454 aa28.62■■■□□ 2.17
SCAMP5-218ENST00000568423 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
SCAMP5-218ENST00000568423 ARID4BQ4LE39 1312 aaPredicted RBP28.58■■■□□ 2.17
SCAMP5-218ENST00000568423 PLCH2O75038 1416 aa28.58■■■□□ 2.17
SCAMP5-218ENST00000568423 EFCAB2Q5VUJ9 269 aa28.57■■■□□ 2.16
SCAMP5-218ENST00000568423 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
SCAMP5-218ENST00000568423 FRMPD1Q5SYB0 1578 aa28.54■■■□□ 2.16
SCAMP5-218ENST00000568423 KIF14Q15058 1648 aa28.52■■■□□ 2.16
SCAMP5-218ENST00000568423 RICTORQ6R327 1708 aa28.5■■■□□ 2.15
SCAMP5-218ENST00000568423 SCAPERQ9BY12 1400 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms