RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 JPH4Q96JJ6 628 aa38.82■■■■□ 3.8
SPG7-217ENST00000568151 PRG4Q92954 1404 aaPredicted RBP38.78■■■■□ 3.8
SPG7-217ENST00000568151 KIAA0586Q9BVV6 1533 aa38.77■■■■□ 3.8
SPG7-217ENST00000568151 RAPGEF2Q9Y4G8 1499 aa38.63■■■■□ 3.77
SPG7-217ENST00000568151 IQGAP2Q13576 1575 aa38.5■■■■□ 3.75
SPG7-217ENST00000568151 TRHP20396 242 aaPredicted RBP38.47■■■■□ 3.75
SPG7-217ENST00000568151 PRXQ9BXM0 1461 aa38.45■■■■□ 3.75
SPG7-217ENST00000568151 CARMIL2Q6F5E8 1435 aa38.33■■■■□ 3.73
SPG7-217ENST00000568151 CTTNBP2Q8WZ74 1663 aa38.3■■■■□ 3.72
SPG7-217ENST00000568151 UGGT2Q9NYU1 1516 aa38.3■■■■□ 3.72
SPG7-217ENST00000568151 CSRNP3Q8WYN3 585 aa38.3■■■■□ 3.72
SPG7-217ENST00000568151 DISP1Q96F81 1524 aa38.29■■■■□ 3.72
SPG7-217ENST00000568151 CHIC1Q5VXU3 224 aa38.27■■■■□ 3.72
SPG7-217ENST00000568151 EEA1Q15075 1411 aa38.27■■■■□ 3.72
SPG7-217ENST00000568151 ADCY10Q96PN6 1610 aa38.27■■■■□ 3.72
SPG7-217ENST00000568151 PTPRGP23470 1445 aa38.26■■■■□ 3.72
SPG7-217ENST00000568151 TNIKQ9UKE5 1360 aa38.25■■■■□ 3.71
SPG7-217ENST00000568151 KIAA0556O60303 1618 aa38.16■■■■□ 3.7
SPG7-217ENST00000568151 TTBK1Q5TCY1 1321 aaPredicted RBP38.16■■■■□ 3.7
SPG7-217ENST00000568151 FAM9AQ8IZU1 332 aaPredicted RBP38.11■■■■□ 3.69
SPG7-217ENST00000568151 NPM1P06748 294 aaKnown RBP eCLIP38.1■■■■□ 3.69
SPG7-217ENST00000568151 MAPKBP1O60336 1514 aa38.06■■■■□ 3.68
SPG7-217ENST00000568151 GOLGA3Q08378 1498 aa38.02■■■■□ 3.68
SPG7-217ENST00000568151 KIF13AQ9H1H9 1805 aa38.01■■■■□ 3.67
SPG7-217ENST00000568151 UACAQ9BZF9 1416 aa38■■■■□ 3.67
SPG7-217ENST00000568151 UHRF1BP1LA0JNW5 1464 aa38■■■■□ 3.67
SPG7-217ENST00000568151 ABCC2Q92887 1545 aa37.97■■■■□ 3.67
SPG7-217ENST00000568151 KIF21BO75037 1637 aa37.94■■■■□ 3.66
SPG7-217ENST00000568151 ABCC10Q5T3U5 1492 aa37.92■■■■□ 3.66
SPG7-217ENST00000568151 DIP2BQ9P265 1576 aa37.87■■■■□ 3.65
SPG7-217ENST00000568151 FAM69CQ0P6D2 419 aa37.84■■■■□ 3.65
SPG7-217ENST00000568151 PLB1Q6P1J6 1458 aa37.83■■■■□ 3.65
SPG7-217ENST00000568151 KDM5BQ9UGL1 1544 aa37.82■■■■□ 3.65
SPG7-217ENST00000568151 SAMD9Q5K651 1589 aa37.81■■■■□ 3.64
SPG7-217ENST00000568151 ABCA8O94911 1581 aa37.77■■■■□ 3.64
SPG7-217ENST00000568151 P3H3Q8IVL6 736 aa37.77■■■■□ 3.64
SPG7-217ENST00000568151 ASXL2Q76L83 1435 aa37.77■■■■□ 3.64
SPG7-217ENST00000568151 ZCCHC11Q5TAX3 1644 aaKnown RBP37.75■■■■□ 3.63
SPG7-217ENST00000568151 RANGAP1P46060 587 aaPredicted RBP37.67■■■■□ 3.62
SPG7-217ENST00000568151 EHMT2Q96KQ7 1210 aa37.65■■■■□ 3.62
SPG7-217ENST00000568151 GLI2P10070 1586 aa37.59■■■■□ 3.61
SPG7-217ENST00000568151 UBTFP17480 764 aaKnown RBP37.58■■■■□ 3.61
SPG7-217ENST00000568151 TSPOAP1O95153 1857 aa37.57■■■■□ 3.6
SPG7-217ENST00000568151 FHOD3Q2V2M9 1422 aa37.56■■■■□ 3.6
SPG7-217ENST00000568151 EFCAB5A4FU69 1503 aa37.55■■■■□ 3.6
SPG7-217ENST00000568151 EPRSP07814 1512 aaKnown RBP37.55■■■■□ 3.6
SPG7-217ENST00000568151 WDR7Q9Y4E6 1490 aa37.52■■■■□ 3.6
SPG7-217ENST00000568151 RAPGEF6Q8TEU7 1601 aa37.5■■■■□ 3.59
SPG7-217ENST00000568151 ATP10BO94823 1461 aa37.45■■■■□ 3.59
SPG7-217ENST00000568151 PPRC1Q5VV67 1664 aaKnown RBP37.44■■■■□ 3.58
SPG7-217ENST00000568151 ARID3CA6NKF2 412 aa37.44■■■■□ 3.58
SPG7-217ENST00000568151 MAP3K4Q9Y6R4 1608 aa37.42■■■■□ 3.58
SPG7-217ENST00000568151 NUP153P49790 1475 aaKnown RBP37.38■■■■□ 3.57
SPG7-217ENST00000568151 ARHGAP35Q9NRY4 1499 aa37.34■■■■□ 3.57
SPG7-217ENST00000568151 KDM6BO15054 1643 aa37.32■■■■□ 3.57
SPG7-217ENST00000568151 KCNH8Q96L42 1107 aa37.32■■■■□ 3.56
SPG7-217ENST00000568151 CFAP43Q8NDM7 1665 aa37.24■■■■□ 3.55
SPG7-217ENST00000568151 TEX14Q8IWB6 1497 aa37.21■■■■□ 3.55
SPG7-217ENST00000568151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.21■■■■□ 3.55
SPG7-217ENST00000568151 HNRNPUL2Q1KMD3 747 aaKnown RBP37.21■■■■□ 3.55
SPG7-217ENST00000568151 CD109Q6YHK3 1445 aa37.19■■■■□ 3.54
SPG7-217ENST00000568151 FMN1Q68DA7 1419 aa37.19■■■■□ 3.54
SPG7-217ENST00000568151 MAGI3Q5TCQ9 1506 aa37.15■■■■□ 3.54
SPG7-217ENST00000568151 COL17A1Q9UMD9 1497 aaPredicted RBP37.12■■■■□ 3.53
SPG7-217ENST00000568151 ABCA9Q8IUA7 1624 aa37.11■■■■□ 3.53
SPG7-217ENST00000568151 CDK13Q14004 1512 aaKnown RBP37.07■■■■□ 3.53
SPG7-217ENST00000568151 HECW1Q76N89 1606 aa37.06■■■■□ 3.52
SPG7-217ENST00000568151 PLEKHD1A6NEE1 506 aa37.05■■■■□ 3.52
SPG7-217ENST00000568151 ATP1B4Q9UN42 357 aaPredicted RBP37■■■■□ 3.51
SPG7-217ENST00000568151 CLIP1P30622 1438 aa36.99■■■■□ 3.51
SPG7-217ENST00000568151 LRRIQ1Q96JM4 1722 aa36.93■■■■□ 3.5
SPG7-217ENST00000568151 PCF11O94913 1555 aaKnown RBP36.91■■■■□ 3.5
SPG7-217ENST00000568151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.9■■■■□ 3.5
SPG7-217ENST00000568151 CASKIN1Q8WXD9 1431 aa36.89■■■■□ 3.5
SPG7-217ENST00000568151 ARAP3Q8WWN8 1544 aa36.85■■■■□ 3.49
SPG7-217ENST00000568151 TTC37Q6PGP7 1564 aa36.85■■■■□ 3.49
SPG7-217ENST00000568151 NEO1Q92859 1461 aa36.82■■■■□ 3.48
SPG7-217ENST00000568151 PHLDB1Q86UU1 1377 aa36.81■■■■□ 3.48
SPG7-217ENST00000568151 CDK11AQ9UQ88 783 aaPredicted RBP36.8■■■■□ 3.48
SPG7-217ENST00000568151 FYCO1Q9BQS8 1478 aa36.77■■■■□ 3.48
SPG7-217ENST00000568151 CEP162Q5TB80 1403 aa36.76■■■■□ 3.47
SPG7-217ENST00000568151 CCDC18Q5T9S5 1454 aa36.75■■■■□ 3.47
SPG7-217ENST00000568151 TROQ12816 1431 aaPredicted RBP36.75■■■■□ 3.47
SPG7-217ENST00000568151 AEBP2Q6ZN18 517 aaPredicted RBP36.73■■■■□ 3.47
SPG7-217ENST00000568151 KIF14Q15058 1648 aa36.73■■■■□ 3.47
SPG7-217ENST00000568151 LOC105371045A0A1W2PR82 267 aa36.72■■■■□ 3.47
SPG7-217ENST00000568151 FANCAO15360 1455 aa36.69■■■■□ 3.46
SPG7-217ENST00000568151 PLCH2O75038 1416 aa36.66■■■■□ 3.46
SPG7-217ENST00000568151 CFAP74Q9C0B2 1584 aa36.66■■■■□ 3.46
SPG7-217ENST00000568151 KDM4FA0A1W2PPD8 638 aa36.65■■■■□ 3.46
SPG7-217ENST00000568151 AKNAQ7Z591 1439 aa36.65■■■■□ 3.46
SPG7-217ENST00000568151 RAPGEF3O95398 923 aa36.64■■■■□ 3.46
SPG7-217ENST00000568151 FRMPD1Q5SYB0 1578 aa36.62■■■■□ 3.45
SPG7-217ENST00000568151 MYO5CQ9NQX4 1742 aa36.62■■■■□ 3.45
SPG7-217ENST00000568151 DENND4BO75064 1496 aaPredicted RBP36.56■■■■□ 3.44
SPG7-217ENST00000568151 RICTORQ6R327 1708 aa36.54■■■■□ 3.44
SPG7-217ENST00000568151 ADGRL1O94910 1474 aa36.53■■■■□ 3.44
SPG7-217ENST00000568151 EFCAB2Q5VUJ9 269 aa36.48■■■■□ 3.43
SPG7-217ENST00000568151 CDC42BPBQ9Y5S2 1711 aa36.45■■■■□ 3.43
SPG7-217ENST00000568151 ARHGAP5Q13017 1502 aa36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms