RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 UBTFP17480 764 aaKnown RBP9.9□□□□□ -0.83
GINS3-206ENST00000567143 EEA1Q15075 1411 aa9.89□□□□□ -0.83
GINS3-206ENST00000567143 GRIN2AQ12879 1464 aa9.89□□□□□ -0.83
GINS3-206ENST00000567143 IGF1RP08069 1367 aa9.87□□□□□ -0.83
GINS3-206ENST00000567143 DIEXFQ68CQ4 756 aaKnown RBP9.87□□□□□ -0.83
GINS3-206ENST00000567143 TDRD9Q8NDG6 1382 aaKnown RBP9.86□□□□□ -0.83
GINS3-206ENST00000567143 RUSC2Q8N2Y8 1516 aa9.86□□□□□ -0.83
GINS3-206ENST00000567143 CEP170Q5SW79 1584 aa9.86□□□□□ -0.83
GINS3-206ENST00000567143 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
GINS3-206ENST00000567143 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
GINS3-206ENST00000567143 PRXQ9BXM0 1461 aa9.84□□□□□ -0.83
GINS3-206ENST00000567143 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
GINS3-206ENST00000567143 KIF21BO75037 1637 aa9.81□□□□□ -0.84
GINS3-206ENST00000567143 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
GINS3-206ENST00000567143 KIAA0586Q9BVV6 1533 aa9.8□□□□□ -0.84
GINS3-206ENST00000567143 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
GINS3-206ENST00000567143 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
GINS3-206ENST00000567143 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
GINS3-206ENST00000567143 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
GINS3-206ENST00000567143 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.84
GINS3-206ENST00000567143 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.84
GINS3-206ENST00000567143 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
GINS3-206ENST00000567143 CENPBP07199 599 aaPredicted RBP9.75□□□□□ -0.85
GINS3-206ENST00000567143 CARMIL1Q5VZK9 1371 aa9.74□□□□□ -0.85
GINS3-206ENST00000567143 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
GINS3-206ENST00000567143 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
GINS3-206ENST00000567143 SAMD9Q5K651 1589 aa9.71□□□□□ -0.86
GINS3-206ENST00000567143 ARAP1Q96P48 1450 aa9.7□□□□□ -0.86
GINS3-206ENST00000567143 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
GINS3-206ENST00000567143 UHRF1BP1LA0JNW5 1464 aa9.7□□□□□ -0.86
GINS3-206ENST00000567143 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
GINS3-206ENST00000567143 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
GINS3-206ENST00000567143 DISP1Q96F81 1524 aa9.67□□□□□ -0.86
GINS3-206ENST00000567143 MIER1Q8N108 512 aa9.67□□□□□ -0.86
GINS3-206ENST00000567143 KIAA0556O60303 1618 aa9.66□□□□□ -0.86
GINS3-206ENST00000567143 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
GINS3-206ENST00000567143 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.86
GINS3-206ENST00000567143 APLP2Q06481 763 aa9.65□□□□□ -0.86
GINS3-206ENST00000567143 GOLGA3Q08378 1498 aa9.64□□□□□ -0.87
GINS3-206ENST00000567143 ERCC6L2Q5T890 1561 aa9.64□□□□□ -0.87
GINS3-206ENST00000567143 ITGAEP38570 1179 aa9.63□□□□□ -0.87
GINS3-206ENST00000567143 MAPKBP1O60336 1514 aa9.63□□□□□ -0.87
GINS3-206ENST00000567143 ABCA8O94911 1581 aa9.61□□□□□ -0.87
GINS3-206ENST00000567143 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
GINS3-206ENST00000567143 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
GINS3-206ENST00000567143 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
GINS3-206ENST00000567143 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
GINS3-206ENST00000567143 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
GINS3-206ENST00000567143 GLI2P10070 1586 aa9.58□□□□□ -0.88
GINS3-206ENST00000567143 KDM5BQ9UGL1 1544 aa9.57□□□□□ -0.88
GINS3-206ENST00000567143 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
GINS3-206ENST00000567143 UACAQ9BZF9 1416 aa9.51□□□□□ -0.89
GINS3-206ENST00000567143 CLIP1P30622 1438 aa9.5□□□□□ -0.89
GINS3-206ENST00000567143 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
GINS3-206ENST00000567143 FBLN2P98095 1184 aa9.49□□□□□ -0.89
GINS3-206ENST00000567143 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
GINS3-206ENST00000567143 PTPRGP23470 1445 aa9.49□□□□□ -0.89
GINS3-206ENST00000567143 KIF13AQ9H1H9 1805 aa9.48□□□□□ -0.89
GINS3-206ENST00000567143 ATP1B4Q9UN42 357 aaPredicted RBP9.48□□□□□ -0.89
GINS3-206ENST00000567143 DIP2BQ9P265 1576 aa9.48□□□□□ -0.89
GINS3-206ENST00000567143 MAP3K4Q9Y6R4 1608 aa9.47□□□□□ -0.89
GINS3-206ENST00000567143 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
GINS3-206ENST00000567143 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
GINS3-206ENST00000567143 BCANQ96GW7 911 aa9.46□□□□□ -0.89
GINS3-206ENST00000567143 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.89
GINS3-206ENST00000567143 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.89
GINS3-206ENST00000567143 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
GINS3-206ENST00000567143 ARAP3Q8WWN8 1544 aa9.44□□□□□ -0.9
GINS3-206ENST00000567143 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
GINS3-206ENST00000567143 HIRIP3Q9BW71 556 aaPredicted RBP9.44□□□□□ -0.9
GINS3-206ENST00000567143 FMN1Q68DA7 1419 aa9.43□□□□□ -0.9
GINS3-206ENST00000567143 MAP3K1Q13233 1512 aa9.43□□□□□ -0.9
GINS3-206ENST00000567143 PPRC1Q5VV67 1664 aaKnown RBP9.43□□□□□ -0.9
GINS3-206ENST00000567143 HECW1Q76N89 1606 aa9.43□□□□□ -0.9
GINS3-206ENST00000567143 NUP153P49790 1475 aaKnown RBP9.43□□□□□ -0.9
GINS3-206ENST00000567143 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
GINS3-206ENST00000567143 FYCO1Q9BQS8 1478 aa9.41□□□□□ -0.9
GINS3-206ENST00000567143 CASKIN1Q8WXD9 1431 aa9.41□□□□□ -0.9
GINS3-206ENST00000567143 LRRIQ1Q96JM4 1722 aa9.41□□□□□ -0.9
GINS3-206ENST00000567143 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
GINS3-206ENST00000567143 ATP10BO94823 1461 aa9.4□□□□□ -0.9
GINS3-206ENST00000567143 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.9
GINS3-206ENST00000567143 MAGI3Q5TCQ9 1506 aa9.4□□□□□ -0.9
GINS3-206ENST00000567143 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
GINS3-206ENST00000567143 CCDC18Q5T9S5 1454 aa9.39□□□□□ -0.91
GINS3-206ENST00000567143 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
GINS3-206ENST00000567143 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
GINS3-206ENST00000567143 VPS8Q8N3P4 1428 aa9.37□□□□□ -0.91
GINS3-206ENST00000567143 PHLDB1Q86UU1 1377 aa9.36□□□□□ -0.91
GINS3-206ENST00000567143 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
GINS3-206ENST00000567143 FAM50AQ14320 339 aaKnown RBP9.36□□□□□ -0.91
GINS3-206ENST00000567143 SUPT16HQ9Y5B9 1047 aaKnown RBP9.35□□□□□ -0.91
GINS3-206ENST00000567143 PCF11O94913 1555 aaKnown RBP9.35□□□□□ -0.91
GINS3-206ENST00000567143 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
GINS3-206ENST00000567143 FHOD3Q2V2M9 1422 aa9.34□□□□□ -0.91
GINS3-206ENST00000567143 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
GINS3-206ENST00000567143 DHX57Q6P158 1386 aaKnown RBP9.32□□□□□ -0.92
GINS3-206ENST00000567143 TEX14Q8IWB6 1497 aa9.31□□□□□ -0.92
GINS3-206ENST00000567143 NEO1Q92859 1461 aa9.31□□□□□ -0.92
GINS3-206ENST00000567143 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms