RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
CCNDBP1-210ENST00000566882 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
CCNDBP1-210ENST00000566882 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
CCNDBP1-210ENST00000566882 PCF11O94913 1555 aaKnown RBP15.35■□□□□ 0.05
CCNDBP1-210ENST00000566882 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
CCNDBP1-210ENST00000566882 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
CCNDBP1-210ENST00000566882 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
CCNDBP1-210ENST00000566882 ITGAEP38570 1179 aa15.3■□□□□ 0.04
CCNDBP1-210ENST00000566882 WDR62O43379 1518 aa15.28■□□□□ 0.04
CCNDBP1-210ENST00000566882 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
CCNDBP1-210ENST00000566882 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
CCNDBP1-210ENST00000566882 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
CCNDBP1-210ENST00000566882 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.04
CCNDBP1-210ENST00000566882 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
CCNDBP1-210ENST00000566882 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.03
CCNDBP1-210ENST00000566882 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
CCNDBP1-210ENST00000566882 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
CCNDBP1-210ENST00000566882 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
CCNDBP1-210ENST00000566882 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
CCNDBP1-210ENST00000566882 SAMD9Q5K651 1589 aa15.23■□□□□ 0.03
CCNDBP1-210ENST00000566882 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
CCNDBP1-210ENST00000566882 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
CCNDBP1-210ENST00000566882 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
CCNDBP1-210ENST00000566882 CASKIN1Q8WXD9 1431 aa15.22■□□□□ 0.03
CCNDBP1-210ENST00000566882 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
CCNDBP1-210ENST00000566882 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
CCNDBP1-210ENST00000566882 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
CCNDBP1-210ENST00000566882 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
CCNDBP1-210ENST00000566882 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
CCNDBP1-210ENST00000566882 FMN1Q68DA7 1419 aa15.18■□□□□ 0.02
CCNDBP1-210ENST00000566882 MYT1Q01538 1121 aa15.16■□□□□ 0.02
CCNDBP1-210ENST00000566882 FAM50AQ14320 339 aaKnown RBP15.16■□□□□ 0.02
CCNDBP1-210ENST00000566882 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
CCNDBP1-210ENST00000566882 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
CCNDBP1-210ENST00000566882 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
CCNDBP1-210ENST00000566882 FBLN2P98095 1184 aa15.1■□□□□ 0.01
CCNDBP1-210ENST00000566882 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
CCNDBP1-210ENST00000566882 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
CCNDBP1-210ENST00000566882 MAGI3Q5TCQ9 1506 aa15.08■□□□□ 0.01
CCNDBP1-210ENST00000566882 RAB3GAP2Q9H2M9 1393 aa15.08■□□□□ 0
CCNDBP1-210ENST00000566882 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
CCNDBP1-210ENST00000566882 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
CCNDBP1-210ENST00000566882 DISP1Q96F81 1524 aa15.04■□□□□ -0
CCNDBP1-210ENST00000566882 UGGT2Q9NYU1 1516 aa15.04■□□□□ -0
CCNDBP1-210ENST00000566882 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
CCNDBP1-210ENST00000566882 CEP170Q5SW79 1584 aa15.03■□□□□ -0
CCNDBP1-210ENST00000566882 NCOA2Q15596 1464 aa15.03■□□□□ -0
CCNDBP1-210ENST00000566882 FGD6Q6ZV73 1430 aa15.02■□□□□ -0
CCNDBP1-210ENST00000566882 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
CCNDBP1-210ENST00000566882 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
CCNDBP1-210ENST00000566882 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
CCNDBP1-210ENST00000566882 KIAA0556O60303 1618 aa15□□□□□ -0.01
CCNDBP1-210ENST00000566882 EPRSP07814 1512 aaKnown RBP15□□□□□ -0.01
CCNDBP1-210ENST00000566882 SYNJ2O15056 1496 aa15□□□□□ -0.01
CCNDBP1-210ENST00000566882 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
CCNDBP1-210ENST00000566882 PTPRKQ15262 1439 aa15□□□□□ -0.01
CCNDBP1-210ENST00000566882 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
CCNDBP1-210ENST00000566882 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
CCNDBP1-210ENST00000566882 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
CCNDBP1-210ENST00000566882 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
CCNDBP1-210ENST00000566882 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
CCNDBP1-210ENST00000566882 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
CCNDBP1-210ENST00000566882 CLSPNQ9HAW4 1339 aa14.94□□□□□ -0.02
CCNDBP1-210ENST00000566882 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
CCNDBP1-210ENST00000566882 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
CCNDBP1-210ENST00000566882 JPH4Q96JJ6 628 aa14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 NUP160Q12769 1436 aa14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
CCNDBP1-210ENST00000566882 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
CCNDBP1-210ENST00000566882 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
CCNDBP1-210ENST00000566882 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
CCNDBP1-210ENST00000566882 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
CCNDBP1-210ENST00000566882 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
CCNDBP1-210ENST00000566882 PRG4Q92954 1404 aaPredicted RBP14.85□□□□□ -0.03
CCNDBP1-210ENST00000566882 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
CCNDBP1-210ENST00000566882 NAIPQ13075 1403 aa14.84□□□□□ -0.03
CCNDBP1-210ENST00000566882 HFM1A2PYH4 1435 aa14.83□□□□□ -0.04
CCNDBP1-210ENST00000566882 CHD1O14646 1710 aa14.82□□□□□ -0.04
CCNDBP1-210ENST00000566882 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
CCNDBP1-210ENST00000566882 CARMIL2Q6F5E8 1435 aa14.81□□□□□ -0.04
CCNDBP1-210ENST00000566882 KDM6BO15054 1643 aa14.81□□□□□ -0.04
CCNDBP1-210ENST00000566882 MIER1Q8N108 512 aa14.79□□□□□ -0.04
CCNDBP1-210ENST00000566882 KIF14Q15058 1648 aa14.79□□□□□ -0.04
CCNDBP1-210ENST00000566882 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
CCNDBP1-210ENST00000566882 MIA2Q96PC5 1412 aa14.77□□□□□ -0.05
CCNDBP1-210ENST00000566882 TROQ12816 1431 aaPredicted RBP14.76□□□□□ -0.05
CCNDBP1-210ENST00000566882 CDK11AQ9UQ88 783 aaPredicted RBP14.75□□□□□ -0.05
CCNDBP1-210ENST00000566882 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CCNDBP1-210ENST00000566882 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
CCNDBP1-210ENST00000566882 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
CCNDBP1-210ENST00000566882 ATP10BO94823 1461 aa14.73□□□□□ -0.05
CCNDBP1-210ENST00000566882 ZNF777Q9ULD5 760 aaPredicted RBP14.73□□□□□ -0.05
CCNDBP1-210ENST00000566882 ABCC5O15440 1437 aa14.72□□□□□ -0.05
CCNDBP1-210ENST00000566882 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
CCNDBP1-210ENST00000566882 DAPK1P53355 1430 aa14.72□□□□□ -0.05
CCNDBP1-210ENST00000566882 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
CCNDBP1-210ENST00000566882 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms