RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
KLHDC4-217ENST00000566661 CTTNBP2Q8WZ74 1663 aa26.05■■□□□ 1.76
KLHDC4-217ENST00000566661 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
KLHDC4-217ENST00000566661 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
KLHDC4-217ENST00000566661 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.75
KLHDC4-217ENST00000566661 WDR62O43379 1518 aa26■■□□□ 1.75
KLHDC4-217ENST00000566661 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
KLHDC4-217ENST00000566661 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
KLHDC4-217ENST00000566661 FHOD3Q2V2M9 1422 aa25.96■■□□□ 1.75
KLHDC4-217ENST00000566661 CENPBP07199 599 aaPredicted RBP25.95■■□□□ 1.74
KLHDC4-217ENST00000566661 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
KLHDC4-217ENST00000566661 EFCAB5A4FU69 1503 aa25.94■■□□□ 1.74
KLHDC4-217ENST00000566661 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
KLHDC4-217ENST00000566661 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
KLHDC4-217ENST00000566661 TIAM1Q13009 1591 aa25.91■■□□□ 1.74
KLHDC4-217ENST00000566661 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
KLHDC4-217ENST00000566661 PCF11O94913 1555 aaKnown RBP25.9■■□□□ 1.74
KLHDC4-217ENST00000566661 MAP3K1Q13233 1512 aa25.89■■□□□ 1.73
KLHDC4-217ENST00000566661 NEUROD1Q13562 356 aa25.87■■□□□ 1.73
KLHDC4-217ENST00000566661 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
KLHDC4-217ENST00000566661 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
KLHDC4-217ENST00000566661 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
KLHDC4-217ENST00000566661 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
KLHDC4-217ENST00000566661 RRBP1Q9P2E9 1410 aaKnown RBP25.83■■□□□ 1.72
KLHDC4-217ENST00000566661 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
KLHDC4-217ENST00000566661 SAMD9Q5K651 1589 aa25.81■■□□□ 1.72
KLHDC4-217ENST00000566661 LRRC9Q6ZRR7 1453 aa25.81■■□□□ 1.72
KLHDC4-217ENST00000566661 CASKIN1Q8WXD9 1431 aa25.79■■□□□ 1.72
KLHDC4-217ENST00000566661 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
KLHDC4-217ENST00000566661 CFAP43Q8NDM7 1665 aa25.78■■□□□ 1.72
KLHDC4-217ENST00000566661 FMN1Q68DA7 1419 aa25.76■■□□□ 1.71
KLHDC4-217ENST00000566661 EIF4G3O43432 1585 aaKnown RBP25.74■■□□□ 1.71
KLHDC4-217ENST00000566661 CCNB3Q8WWL7 1395 aa25.74■■□□□ 1.71
KLHDC4-217ENST00000566661 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
KLHDC4-217ENST00000566661 IQGAP2Q13576 1575 aa25.69■■□□□ 1.7
KLHDC4-217ENST00000566661 PHLDB1Q86UU1 1377 aa25.67■■□□□ 1.7
KLHDC4-217ENST00000566661 GTF3C3Q9Y5Q9 886 aa25.62■■□□□ 1.69
KLHDC4-217ENST00000566661 ITGAEP38570 1179 aa25.61■■□□□ 1.69
KLHDC4-217ENST00000566661 LRRIQ1Q96JM4 1722 aa25.61■■□□□ 1.69
KLHDC4-217ENST00000566661 DHX57Q6P158 1386 aaKnown RBP25.61■■□□□ 1.69
KLHDC4-217ENST00000566661 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
KLHDC4-217ENST00000566661 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
KLHDC4-217ENST00000566661 KIAA0586Q9BVV6 1533 aa25.55■■□□□ 1.68
KLHDC4-217ENST00000566661 UGGT2Q9NYU1 1516 aa25.55■■□□□ 1.68
KLHDC4-217ENST00000566661 MTUS2Q5JR59 1369 aa25.52■■□□□ 1.68
KLHDC4-217ENST00000566661 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
KLHDC4-217ENST00000566661 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
KLHDC4-217ENST00000566661 MIER1Q8N108 512 aa25.49■■□□□ 1.67
KLHDC4-217ENST00000566661 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
KLHDC4-217ENST00000566661 FBLN2P98095 1184 aa25.47■■□□□ 1.67
KLHDC4-217ENST00000566661 DISP1Q96F81 1524 aa25.45■■□□□ 1.66
KLHDC4-217ENST00000566661 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
KLHDC4-217ENST00000566661 HECW1Q76N89 1606 aa25.43■■□□□ 1.66
KLHDC4-217ENST00000566661 KIAA0556O60303 1618 aa25.43■■□□□ 1.66
KLHDC4-217ENST00000566661 MAGI3Q5TCQ9 1506 aa25.41■■□□□ 1.66
KLHDC4-217ENST00000566661 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
KLHDC4-217ENST00000566661 NCOA2Q15596 1464 aa25.39■■□□□ 1.66
KLHDC4-217ENST00000566661 FGD6Q6ZV73 1430 aa25.39■■□□□ 1.66
KLHDC4-217ENST00000566661 EHBP1L1Q8N3D4 1523 aa25.39■■□□□ 1.65
KLHDC4-217ENST00000566661 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
KLHDC4-217ENST00000566661 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
KLHDC4-217ENST00000566661 ARID3CA6NKF2 412 aa25.36■■□□□ 1.65
KLHDC4-217ENST00000566661 SUPT6HQ7KZ85 1726 aaKnown RBP25.36■■□□□ 1.65
KLHDC4-217ENST00000566661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.65
KLHDC4-217ENST00000566661 CDK13Q14004 1512 aaKnown RBP25.35■■□□□ 1.65
KLHDC4-217ENST00000566661 NUP160Q12769 1436 aa25.34■■□□□ 1.65
KLHDC4-217ENST00000566661 SETD5Q9C0A6 1442 aa25.34■■□□□ 1.65
KLHDC4-217ENST00000566661 YTHDC1Q96MU7 727 aaKnown RBP25.32■■□□□ 1.64
KLHDC4-217ENST00000566661 MYOM3Q5VTT5 1437 aa25.32■■□□□ 1.64
KLHDC4-217ENST00000566661 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
KLHDC4-217ENST00000566661 JPH4Q96JJ6 628 aa25.28■■□□□ 1.64
KLHDC4-217ENST00000566661 RAPGEF6Q8TEU7 1601 aa25.25■■□□□ 1.63
KLHDC4-217ENST00000566661 NUP153P49790 1475 aaKnown RBP25.25■■□□□ 1.63
KLHDC4-217ENST00000566661 PTPRKQ15262 1439 aa25.21■■□□□ 1.63
KLHDC4-217ENST00000566661 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
KLHDC4-217ENST00000566661 CARMIL2Q6F5E8 1435 aa25.2■■□□□ 1.62
KLHDC4-217ENST00000566661 MAPKBP1O60336 1514 aa25.18■■□□□ 1.62
KLHDC4-217ENST00000566661 PLB1Q6P1J6 1458 aa25.18■■□□□ 1.62
KLHDC4-217ENST00000566661 TCOF1Q13428 1488 aaKnown RBP25.11■■□□□ 1.61
KLHDC4-217ENST00000566661 CHD1O14646 1710 aa25.1■■□□□ 1.61
KLHDC4-217ENST00000566661 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
KLHDC4-217ENST00000566661 CDK11AQ9UQ88 783 aaPredicted RBP25.08■■□□□ 1.61
KLHDC4-217ENST00000566661 MIA2Q96PC5 1412 aa25.07■■□□□ 1.6
KLHDC4-217ENST00000566661 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
KLHDC4-217ENST00000566661 TIMELESSQ9UNS1 1208 aa25.04■■□□□ 1.6
KLHDC4-217ENST00000566661 NAIPQ13075 1403 aa25.04■■□□□ 1.6
KLHDC4-217ENST00000566661 CHIC2Q9UKJ5 165 aa25.02■■□□□ 1.6
KLHDC4-217ENST00000566661 TROQ12816 1431 aaPredicted RBP25.02■■□□□ 1.6
KLHDC4-217ENST00000566661 ABCA8O94911 1581 aa25.01■■□□□ 1.59
KLHDC4-217ENST00000566661 SIN3AQ96ST3 1273 aa24.99■■□□□ 1.59
KLHDC4-217ENST00000566661 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
KLHDC4-217ENST00000566661 ZNF644Q9H582 1327 aaPredicted RBP24.96■■□□□ 1.59
KLHDC4-217ENST00000566661 PTPRGP23470 1445 aa24.94■■□□□ 1.58
KLHDC4-217ENST00000566661 KIF14Q15058 1648 aa24.94■■□□□ 1.58
KLHDC4-217ENST00000566661 ATP10BO94823 1461 aa24.94■■□□□ 1.58
KLHDC4-217ENST00000566661 UACAQ9BZF9 1416 aa24.93■■□□□ 1.58
KLHDC4-217ENST00000566661 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
KLHDC4-217ENST00000566661 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
KLHDC4-217ENST00000566661 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.58
KLHDC4-217ENST00000566661 DAPK1P53355 1430 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms