RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
VAC14-208ENST00000566655 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
VAC14-208ENST00000566655 CTTNBP2Q8WZ74 1663 aa24.98■■□□□ 1.59
VAC14-208ENST00000566655 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
VAC14-208ENST00000566655 NUP160Q12769 1436 aa24.91■■□□□ 1.58
VAC14-208ENST00000566655 EFCAB5A4FU69 1503 aa24.9■■□□□ 1.58
VAC14-208ENST00000566655 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.58
VAC14-208ENST00000566655 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
VAC14-208ENST00000566655 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
VAC14-208ENST00000566655 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
VAC14-208ENST00000566655 UGGT2Q9NYU1 1516 aa24.82■■□□□ 1.56
VAC14-208ENST00000566655 FHOD3Q2V2M9 1422 aa24.82■■□□□ 1.56
VAC14-208ENST00000566655 FBLN2P98095 1184 aa24.82■■□□□ 1.56
VAC14-208ENST00000566655 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
VAC14-208ENST00000566655 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
VAC14-208ENST00000566655 DISP1Q96F81 1524 aa24.72■■□□□ 1.55
VAC14-208ENST00000566655 TRIM26Q12899 539 aaPredicted RBP24.68■■□□□ 1.54
VAC14-208ENST00000566655 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
VAC14-208ENST00000566655 CHD1O14646 1710 aa24.67■■□□□ 1.54
VAC14-208ENST00000566655 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
VAC14-208ENST00000566655 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
VAC14-208ENST00000566655 PCF11O94913 1555 aaKnown RBP24.64■■□□□ 1.53
VAC14-208ENST00000566655 KIAA0556O60303 1618 aa24.63■■□□□ 1.53
VAC14-208ENST00000566655 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
VAC14-208ENST00000566655 MAP3K1Q13233 1512 aa24.61■■□□□ 1.53
VAC14-208ENST00000566655 APLP2Q06481 763 aa24.6■■□□□ 1.53
VAC14-208ENST00000566655 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
VAC14-208ENST00000566655 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
VAC14-208ENST00000566655 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
VAC14-208ENST00000566655 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
VAC14-208ENST00000566655 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
VAC14-208ENST00000566655 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
VAC14-208ENST00000566655 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
VAC14-208ENST00000566655 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
VAC14-208ENST00000566655 LRRC9Q6ZRR7 1453 aa24.46■■□□□ 1.51
VAC14-208ENST00000566655 CFAP43Q8NDM7 1665 aa24.45■■□□□ 1.5
VAC14-208ENST00000566655 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
VAC14-208ENST00000566655 HECW1Q76N89 1606 aa24.39■■□□□ 1.49
VAC14-208ENST00000566655 LRRIQ1Q96JM4 1722 aa24.39■■□□□ 1.49
VAC14-208ENST00000566655 NUP153P49790 1475 aaKnown RBP24.37■■□□□ 1.49
VAC14-208ENST00000566655 PLB1Q6P1J6 1458 aa24.37■■□□□ 1.49
VAC14-208ENST00000566655 EPRSP07814 1512 aaKnown RBP24.37■■□□□ 1.49
VAC14-208ENST00000566655 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
VAC14-208ENST00000566655 CCDC18Q5T9S5 1454 aa24.36■■□□□ 1.49
VAC14-208ENST00000566655 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
VAC14-208ENST00000566655 ABCA8O94911 1581 aa24.34■■□□□ 1.49
VAC14-208ENST00000566655 PTPRGP23470 1445 aa24.33■■□□□ 1.49
VAC14-208ENST00000566655 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
VAC14-208ENST00000566655 CDK13Q14004 1512 aaKnown RBP24.3■■□□□ 1.48
VAC14-208ENST00000566655 MAGI3Q5TCQ9 1506 aa24.3■■□□□ 1.48
VAC14-208ENST00000566655 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
VAC14-208ENST00000566655 RRBP1Q9P2E9 1410 aaKnown RBP24.28■■□□□ 1.48
VAC14-208ENST00000566655 PHLDB1Q86UU1 1377 aa24.26■■□□□ 1.47
VAC14-208ENST00000566655 MTUS2Q5JR59 1369 aa24.25■■□□□ 1.47
VAC14-208ENST00000566655 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
VAC14-208ENST00000566655 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
VAC14-208ENST00000566655 ARHGEF11O15085 1522 aa24.2■■□□□ 1.47
VAC14-208ENST00000566655 ARID3CA6NKF2 412 aa24.2■■□□□ 1.46
VAC14-208ENST00000566655 ATP10BO94823 1461 aa24.19■■□□□ 1.46
VAC14-208ENST00000566655 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
VAC14-208ENST00000566655 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
VAC14-208ENST00000566655 UHRF1BP1LA0JNW5 1464 aa24.12■■□□□ 1.45
VAC14-208ENST00000566655 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
VAC14-208ENST00000566655 TROQ12816 1431 aaPredicted RBP24.11■■□□□ 1.45
VAC14-208ENST00000566655 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
VAC14-208ENST00000566655 SUPT6HQ7KZ85 1726 aaKnown RBP24.09■■□□□ 1.45
VAC14-208ENST00000566655 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
VAC14-208ENST00000566655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.44
VAC14-208ENST00000566655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.05■■□□□ 1.44
VAC14-208ENST00000566655 HNRNPUL2Q1KMD3 747 aaKnown RBP24.05■■□□□ 1.44
VAC14-208ENST00000566655 FGD6Q6ZV73 1430 aa24.05■■□□□ 1.44
VAC14-208ENST00000566655 KDM5BQ9UGL1 1544 aa24.01■■□□□ 1.43
VAC14-208ENST00000566655 PLEKHD1A6NEE1 506 aa24.01■■□□□ 1.43
VAC14-208ENST00000566655 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
VAC14-208ENST00000566655 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
VAC14-208ENST00000566655 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
VAC14-208ENST00000566655 KIF14Q15058 1648 aa23.95■■□□□ 1.42
VAC14-208ENST00000566655 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
VAC14-208ENST00000566655 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
VAC14-208ENST00000566655 GPATCH8Q9UKJ3 1502 aaKnown RBP23.91■■□□□ 1.42
VAC14-208ENST00000566655 ZCCHC11Q5TAX3 1644 aaKnown RBP23.91■■□□□ 1.42
VAC14-208ENST00000566655 PTPN23Q9H3S7 1636 aa23.89■■□□□ 1.41
VAC14-208ENST00000566655 PTPRKQ15262 1439 aa23.85■■□□□ 1.41
VAC14-208ENST00000566655 HRCP23327 699 aa23.85■■□□□ 1.41
VAC14-208ENST00000566655 ITGAEP38570 1179 aa23.83■■□□□ 1.41
VAC14-208ENST00000566655 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
VAC14-208ENST00000566655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
VAC14-208ENST00000566655 CFDP1Q9UEE9 299 aaPredicted RBP23.78■■□□□ 1.4
VAC14-208ENST00000566655 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
VAC14-208ENST00000566655 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
VAC14-208ENST00000566655 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
VAC14-208ENST00000566655 ITSN2Q9NZM3 1697 aa23.75■■□□□ 1.39
VAC14-208ENST00000566655 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
VAC14-208ENST00000566655 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
VAC14-208ENST00000566655 CDC42BPAQ5VT25 1732 aa23.73■■□□□ 1.39
VAC14-208ENST00000566655 CAMSAP2Q08AD1 1489 aa23.73■■□□□ 1.39
VAC14-208ENST00000566655 ABCC5O15440 1437 aa23.72■■□□□ 1.39
VAC14-208ENST00000566655 ASXL2Q76L83 1435 aa23.72■■□□□ 1.39
VAC14-208ENST00000566655 KCNH8Q96L42 1107 aa23.72■■□□□ 1.39
VAC14-208ENST00000566655 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms