RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
LINC01541-201ENST00000566582 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
LINC01541-201ENST00000566582 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
LINC01541-201ENST00000566582 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
LINC01541-201ENST00000566582 TIAM1Q13009 1591 aa13.09□□□□□ -0.31
LINC01541-201ENST00000566582 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01541-201ENST00000566582 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
LINC01541-201ENST00000566582 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
LINC01541-201ENST00000566582 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
LINC01541-201ENST00000566582 RRBP1Q9P2E9 1410 aaKnown RBP13.06□□□□□ -0.32
LINC01541-201ENST00000566582 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
LINC01541-201ENST00000566582 ITGAEP38570 1179 aa13.05□□□□□ -0.32
LINC01541-201ENST00000566582 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
LINC01541-201ENST00000566582 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
LINC01541-201ENST00000566582 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
LINC01541-201ENST00000566582 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
LINC01541-201ENST00000566582 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
LINC01541-201ENST00000566582 WDR62O43379 1518 aa13.02□□□□□ -0.32
LINC01541-201ENST00000566582 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.32
LINC01541-201ENST00000566582 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
LINC01541-201ENST00000566582 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
LINC01541-201ENST00000566582 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
LINC01541-201ENST00000566582 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
LINC01541-201ENST00000566582 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
LINC01541-201ENST00000566582 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
LINC01541-201ENST00000566582 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
LINC01541-201ENST00000566582 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
LINC01541-201ENST00000566582 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
LINC01541-201ENST00000566582 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
LINC01541-201ENST00000566582 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
LINC01541-201ENST00000566582 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
LINC01541-201ENST00000566582 EIF4G3O43432 1585 aaKnown RBP12.92□□□□□ -0.34
LINC01541-201ENST00000566582 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
LINC01541-201ENST00000566582 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
LINC01541-201ENST00000566582 FBLN2P98095 1184 aa12.9□□□□□ -0.34
LINC01541-201ENST00000566582 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
LINC01541-201ENST00000566582 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
LINC01541-201ENST00000566582 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
LINC01541-201ENST00000566582 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
LINC01541-201ENST00000566582 GRIN2AQ12879 1464 aa12.87□□□□□ -0.35
LINC01541-201ENST00000566582 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
LINC01541-201ENST00000566582 KIAA0586Q9BVV6 1533 aa12.86□□□□□ -0.35
LINC01541-201ENST00000566582 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
LINC01541-201ENST00000566582 ARID3CA6NKF2 412 aa12.86□□□□□ -0.35
LINC01541-201ENST00000566582 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
LINC01541-201ENST00000566582 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
LINC01541-201ENST00000566582 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
LINC01541-201ENST00000566582 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
LINC01541-201ENST00000566582 FGD6Q6ZV73 1430 aa12.84□□□□□ -0.35
LINC01541-201ENST00000566582 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
LINC01541-201ENST00000566582 NCOA2Q15596 1464 aa12.83□□□□□ -0.36
LINC01541-201ENST00000566582 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
LINC01541-201ENST00000566582 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
LINC01541-201ENST00000566582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC01541-201ENST00000566582 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
LINC01541-201ENST00000566582 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
LINC01541-201ENST00000566582 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
LINC01541-201ENST00000566582 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
LINC01541-201ENST00000566582 DISP1Q96F81 1524 aa12.79□□□□□ -0.36
LINC01541-201ENST00000566582 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
LINC01541-201ENST00000566582 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
LINC01541-201ENST00000566582 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
LINC01541-201ENST00000566582 CARMIL2Q6F5E8 1435 aa12.74□□□□□ -0.37
LINC01541-201ENST00000566582 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
LINC01541-201ENST00000566582 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
LINC01541-201ENST00000566582 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
LINC01541-201ENST00000566582 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
LINC01541-201ENST00000566582 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
LINC01541-201ENST00000566582 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
LINC01541-201ENST00000566582 NUP160Q12769 1436 aa12.72□□□□□ -0.37
LINC01541-201ENST00000566582 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.37
LINC01541-201ENST00000566582 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
LINC01541-201ENST00000566582 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
LINC01541-201ENST00000566582 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
LINC01541-201ENST00000566582 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
LINC01541-201ENST00000566582 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
LINC01541-201ENST00000566582 PLB1Q6P1J6 1458 aa12.68□□□□□ -0.38
LINC01541-201ENST00000566582 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
LINC01541-201ENST00000566582 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
LINC01541-201ENST00000566582 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
LINC01541-201ENST00000566582 NAIPQ13075 1403 aa12.66□□□□□ -0.38
LINC01541-201ENST00000566582 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
LINC01541-201ENST00000566582 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
LINC01541-201ENST00000566582 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
LINC01541-201ENST00000566582 MIER1Q8N108 512 aa12.62□□□□□ -0.39
LINC01541-201ENST00000566582 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
LINC01541-201ENST00000566582 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
LINC01541-201ENST00000566582 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
LINC01541-201ENST00000566582 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
LINC01541-201ENST00000566582 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
LINC01541-201ENST00000566582 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
LINC01541-201ENST00000566582 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
LINC01541-201ENST00000566582 CHD1O14646 1710 aa12.59□□□□□ -0.39
LINC01541-201ENST00000566582 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
LINC01541-201ENST00000566582 PTPRGP23470 1445 aa12.58□□□□□ -0.4
LINC01541-201ENST00000566582 DAPK1P53355 1430 aa12.58□□□□□ -0.4
LINC01541-201ENST00000566582 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
LINC01541-201ENST00000566582 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
LINC01541-201ENST00000566582 AKNAQ7Z591 1439 aa12.57□□□□□ -0.4
LINC01541-201ENST00000566582 ABCA8O94911 1581 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms