RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
LPCAT4-206ENST00000566581 KIAA0586Q9BVV6 1533 aa21.59■■□□□ 1.05
LPCAT4-206ENST00000566581 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
LPCAT4-206ENST00000566581 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
LPCAT4-206ENST00000566581 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
LPCAT4-206ENST00000566581 IQGAP2Q13576 1575 aa21.42■■□□□ 1.02
LPCAT4-206ENST00000566581 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
LPCAT4-206ENST00000566581 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
LPCAT4-206ENST00000566581 CTTNBP2Q8WZ74 1663 aa21.32■■□□□ 1
LPCAT4-206ENST00000566581 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
LPCAT4-206ENST00000566581 PTPRGP23470 1445 aa21.29■■□□□ 1
LPCAT4-206ENST00000566581 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
LPCAT4-206ENST00000566581 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
LPCAT4-206ENST00000566581 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
LPCAT4-206ENST00000566581 DISP1Q96F81 1524 aa21.28■■□□□ 1
LPCAT4-206ENST00000566581 EEA1Q15075 1411 aa21.27■■□□□ 1
LPCAT4-206ENST00000566581 NPM1P06748 294 aaKnown RBP eCLIP21.26■□□□□ 0.99
LPCAT4-206ENST00000566581 KIF13AQ9H1H9 1805 aa21.23■□□□□ 0.99
LPCAT4-206ENST00000566581 MAPKBP1O60336 1514 aa21.22■□□□□ 0.99
LPCAT4-206ENST00000566581 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
LPCAT4-206ENST00000566581 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
LPCAT4-206ENST00000566581 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
LPCAT4-206ENST00000566581 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
LPCAT4-206ENST00000566581 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
LPCAT4-206ENST00000566581 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
LPCAT4-206ENST00000566581 ABCC2Q92887 1545 aa21.14■□□□□ 0.98
LPCAT4-206ENST00000566581 ABCC10Q5T3U5 1492 aa21.14■□□□□ 0.98
LPCAT4-206ENST00000566581 DIP2BQ9P265 1576 aa21.09■□□□□ 0.97
LPCAT4-206ENST00000566581 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
LPCAT4-206ENST00000566581 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
LPCAT4-206ENST00000566581 KDM5BQ9UGL1 1544 aa21.07■□□□□ 0.96
LPCAT4-206ENST00000566581 KIF21BO75037 1637 aa21.07■□□□□ 0.96
LPCAT4-206ENST00000566581 PLB1Q6P1J6 1458 aa21.03■□□□□ 0.96
LPCAT4-206ENST00000566581 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
LPCAT4-206ENST00000566581 ABCA8O94911 1581 aa21.01■□□□□ 0.95
LPCAT4-206ENST00000566581 SAMD9Q5K651 1589 aa21.01■□□□□ 0.95
LPCAT4-206ENST00000566581 ZCCHC11Q5TAX3 1644 aaKnown RBP21■□□□□ 0.95
LPCAT4-206ENST00000566581 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
LPCAT4-206ENST00000566581 GLI2P10070 1586 aa20.97■□□□□ 0.95
LPCAT4-206ENST00000566581 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
LPCAT4-206ENST00000566581 EPRSP07814 1512 aaKnown RBP20.9■□□□□ 0.94
LPCAT4-206ENST00000566581 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
LPCAT4-206ENST00000566581 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
LPCAT4-206ENST00000566581 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
LPCAT4-206ENST00000566581 MAP3K4Q9Y6R4 1608 aa20.86■□□□□ 0.93
LPCAT4-206ENST00000566581 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
LPCAT4-206ENST00000566581 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
LPCAT4-206ENST00000566581 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
LPCAT4-206ENST00000566581 ATP10BO94823 1461 aa20.83■□□□□ 0.93
LPCAT4-206ENST00000566581 FHOD3Q2V2M9 1422 aa20.81■□□□□ 0.92
LPCAT4-206ENST00000566581 KDM6BO15054 1643 aa20.81■□□□□ 0.92
LPCAT4-206ENST00000566581 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
LPCAT4-206ENST00000566581 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
LPCAT4-206ENST00000566581 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
LPCAT4-206ENST00000566581 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
LPCAT4-206ENST00000566581 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
LPCAT4-206ENST00000566581 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
LPCAT4-206ENST00000566581 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
LPCAT4-206ENST00000566581 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
LPCAT4-206ENST00000566581 MAGI3Q5TCQ9 1506 aa20.71■□□□□ 0.91
LPCAT4-206ENST00000566581 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
LPCAT4-206ENST00000566581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
LPCAT4-206ENST00000566581 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
LPCAT4-206ENST00000566581 ABCA9Q8IUA7 1624 aa20.67■□□□□ 0.9
LPCAT4-206ENST00000566581 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
LPCAT4-206ENST00000566581 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
LPCAT4-206ENST00000566581 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
LPCAT4-206ENST00000566581 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.88
LPCAT4-206ENST00000566581 CDK13Q14004 1512 aaKnown RBP20.56■□□□□ 0.88
LPCAT4-206ENST00000566581 ARAP3Q8WWN8 1544 aa20.55■□□□□ 0.88
LPCAT4-206ENST00000566581 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
LPCAT4-206ENST00000566581 NEO1Q92859 1461 aa20.52■□□□□ 0.88
LPCAT4-206ENST00000566581 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
LPCAT4-206ENST00000566581 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.88
LPCAT4-206ENST00000566581 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
LPCAT4-206ENST00000566581 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
LPCAT4-206ENST00000566581 CLIP1P30622 1438 aa20.51■□□□□ 0.87
LPCAT4-206ENST00000566581 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
LPCAT4-206ENST00000566581 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
LPCAT4-206ENST00000566581 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
LPCAT4-206ENST00000566581 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
LPCAT4-206ENST00000566581 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
LPCAT4-206ENST00000566581 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
LPCAT4-206ENST00000566581 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
LPCAT4-206ENST00000566581 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
LPCAT4-206ENST00000566581 FANCAO15360 1455 aa20.41■□□□□ 0.86
LPCAT4-206ENST00000566581 PLCH2O75038 1416 aa20.4■□□□□ 0.86
LPCAT4-206ENST00000566581 AKNAQ7Z591 1439 aa20.4■□□□□ 0.86
LPCAT4-206ENST00000566581 MYO5CQ9NQX4 1742 aa20.4■□□□□ 0.86
LPCAT4-206ENST00000566581 KIF14Q15058 1648 aa20.39■□□□□ 0.86
LPCAT4-206ENST00000566581 RAPGEF3O95398 923 aa20.38■□□□□ 0.85
LPCAT4-206ENST00000566581 RICTORQ6R327 1708 aa20.37■□□□□ 0.85
LPCAT4-206ENST00000566581 FRMPD1Q5SYB0 1578 aa20.36■□□□□ 0.85
LPCAT4-206ENST00000566581 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
LPCAT4-206ENST00000566581 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
LPCAT4-206ENST00000566581 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
LPCAT4-206ENST00000566581 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
LPCAT4-206ENST00000566581 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
LPCAT4-206ENST00000566581 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
LPCAT4-206ENST00000566581 SCAPERQ9BY12 1400 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms