RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TARBP1Q13395 1621 aaKnown RBP19.99■□□□□ 0.79
LINC00563-201ENST00000566370 CFAP43Q8NDM7 1665 aa19.99■□□□□ 0.79
LINC00563-201ENST00000566370 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
LINC00563-201ENST00000566370 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
LINC00563-201ENST00000566370 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
LINC00563-201ENST00000566370 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
LINC00563-201ENST00000566370 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
LINC00563-201ENST00000566370 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
LINC00563-201ENST00000566370 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
LINC00563-201ENST00000566370 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
LINC00563-201ENST00000566370 CCNB3Q8WWL7 1395 aa19.91■□□□□ 0.78
LINC00563-201ENST00000566370 CASKIN1Q8WXD9 1431 aa19.91■□□□□ 0.78
LINC00563-201ENST00000566370 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
LINC00563-201ENST00000566370 CLSPNQ9HAW4 1339 aa19.9■□□□□ 0.78
LINC00563-201ENST00000566370 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
LINC00563-201ENST00000566370 WDR62O43379 1518 aa19.88■□□□□ 0.77
LINC00563-201ENST00000566370 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
LINC00563-201ENST00000566370 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
LINC00563-201ENST00000566370 FHOD3Q2V2M9 1422 aa19.87■□□□□ 0.77
LINC00563-201ENST00000566370 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
LINC00563-201ENST00000566370 THOC2Q8NI27 1593 aaKnown RBP19.85■□□□□ 0.77
LINC00563-201ENST00000566370 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
LINC00563-201ENST00000566370 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
LINC00563-201ENST00000566370 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
LINC00563-201ENST00000566370 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
LINC00563-201ENST00000566370 IQGAP2Q13576 1575 aa19.77■□□□□ 0.76
LINC00563-201ENST00000566370 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
LINC00563-201ENST00000566370 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
LINC00563-201ENST00000566370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
LINC00563-201ENST00000566370 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
LINC00563-201ENST00000566370 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
LINC00563-201ENST00000566370 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
LINC00563-201ENST00000566370 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
LINC00563-201ENST00000566370 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
LINC00563-201ENST00000566370 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
LINC00563-201ENST00000566370 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
LINC00563-201ENST00000566370 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
LINC00563-201ENST00000566370 UGGT2Q9NYU1 1516 aa19.64■□□□□ 0.74
LINC00563-201ENST00000566370 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
LINC00563-201ENST00000566370 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
LINC00563-201ENST00000566370 ITGAEP38570 1179 aa19.63■□□□□ 0.73
LINC00563-201ENST00000566370 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
LINC00563-201ENST00000566370 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
LINC00563-201ENST00000566370 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
LINC00563-201ENST00000566370 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
LINC00563-201ENST00000566370 GRIN2AQ12879 1464 aa19.59■□□□□ 0.73
LINC00563-201ENST00000566370 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
LINC00563-201ENST00000566370 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
LINC00563-201ENST00000566370 LRRIQ1Q96JM4 1722 aa19.58■□□□□ 0.72
LINC00563-201ENST00000566370 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
LINC00563-201ENST00000566370 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
LINC00563-201ENST00000566370 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
LINC00563-201ENST00000566370 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
LINC00563-201ENST00000566370 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
LINC00563-201ENST00000566370 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
LINC00563-201ENST00000566370 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
LINC00563-201ENST00000566370 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
LINC00563-201ENST00000566370 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
LINC00563-201ENST00000566370 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
LINC00563-201ENST00000566370 RAPGEF6Q8TEU7 1601 aa19.45■□□□□ 0.7
LINC00563-201ENST00000566370 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
LINC00563-201ENST00000566370 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
LINC00563-201ENST00000566370 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
LINC00563-201ENST00000566370 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
LINC00563-201ENST00000566370 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
LINC00563-201ENST00000566370 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
LINC00563-201ENST00000566370 HFM1A2PYH4 1435 aa19.4■□□□□ 0.7
LINC00563-201ENST00000566370 MAPKBP1O60336 1514 aa19.4■□□□□ 0.7
LINC00563-201ENST00000566370 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
LINC00563-201ENST00000566370 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
LINC00563-201ENST00000566370 NUP160Q12769 1436 aa19.38■□□□□ 0.69
LINC00563-201ENST00000566370 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
LINC00563-201ENST00000566370 MAGI3Q5TCQ9 1506 aa19.37■□□□□ 0.69
LINC00563-201ENST00000566370 AKNAQ7Z591 1439 aa19.35■□□□□ 0.69
LINC00563-201ENST00000566370 FBLN2P98095 1184 aa19.34■□□□□ 0.69
LINC00563-201ENST00000566370 GCC2Q8IWJ2 1684 aa19.33■□□□□ 0.68
LINC00563-201ENST00000566370 UACAQ9BZF9 1416 aa19.33■□□□□ 0.68
LINC00563-201ENST00000566370 NUP153P49790 1475 aaKnown RBP19.32■□□□□ 0.68
LINC00563-201ENST00000566370 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
LINC00563-201ENST00000566370 NAIPQ13075 1403 aa19.28■□□□□ 0.68
LINC00563-201ENST00000566370 JPH4Q96JJ6 628 aa19.26■□□□□ 0.67
LINC00563-201ENST00000566370 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
LINC00563-201ENST00000566370 ADCY10Q96PN6 1610 aa19.26■□□□□ 0.67
LINC00563-201ENST00000566370 PTPRKQ15262 1439 aa19.24■□□□□ 0.67
LINC00563-201ENST00000566370 DNMT1P26358 1616 aaKnown RBP19.21■□□□□ 0.67
LINC00563-201ENST00000566370 ROCK1Q13464 1354 aa19.21■□□□□ 0.67
LINC00563-201ENST00000566370 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
LINC00563-201ENST00000566370 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
LINC00563-201ENST00000566370 ABCA8O94911 1581 aa19.19■□□□□ 0.66
LINC00563-201ENST00000566370 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
LINC00563-201ENST00000566370 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
LINC00563-201ENST00000566370 DAPK1P53355 1430 aa19.17■□□□□ 0.66
LINC00563-201ENST00000566370 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
LINC00563-201ENST00000566370 KIF14Q15058 1648 aa19.17■□□□□ 0.66
LINC00563-201ENST00000566370 CHD1O14646 1710 aa19.15■□□□□ 0.66
LINC00563-201ENST00000566370 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
LINC00563-201ENST00000566370 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
LINC00563-201ENST00000566370 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
LINC00563-201ENST00000566370 MIER1Q8N108 512 aa19.12■□□□□ 0.65
LINC00563-201ENST00000566370 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms