RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
FANCA-219ENST00000566133 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
FANCA-219ENST00000566133 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
FANCA-219ENST00000566133 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
FANCA-219ENST00000566133 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
FANCA-219ENST00000566133 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
FANCA-219ENST00000566133 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
FANCA-219ENST00000566133 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
FANCA-219ENST00000566133 CUL7Q14999 1698 aa19.32■□□□□ 0.68
FANCA-219ENST00000566133 PTPRGP23470 1445 aa19.29■□□□□ 0.68
FANCA-219ENST00000566133 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
FANCA-219ENST00000566133 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
FANCA-219ENST00000566133 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
FANCA-219ENST00000566133 ADCY10Q96PN6 1610 aa19.21■□□□□ 0.67
FANCA-219ENST00000566133 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
FANCA-219ENST00000566133 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
FANCA-219ENST00000566133 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
FANCA-219ENST00000566133 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
FANCA-219ENST00000566133 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
FANCA-219ENST00000566133 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
FANCA-219ENST00000566133 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
FANCA-219ENST00000566133 ABCC2Q92887 1545 aa19.09■□□□□ 0.65
FANCA-219ENST00000566133 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
FANCA-219ENST00000566133 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
FANCA-219ENST00000566133 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
FANCA-219ENST00000566133 PLB1Q6P1J6 1458 aa19.05■□□□□ 0.64
FANCA-219ENST00000566133 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
FANCA-219ENST00000566133 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
FANCA-219ENST00000566133 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
FANCA-219ENST00000566133 KDM5BQ9UGL1 1544 aa18.97■□□□□ 0.63
FANCA-219ENST00000566133 P3H3Q8IVL6 736 aa18.97■□□□□ 0.63
FANCA-219ENST00000566133 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
FANCA-219ENST00000566133 KDM6BO15054 1643 aa18.96■□□□□ 0.63
FANCA-219ENST00000566133 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
FANCA-219ENST00000566133 KCNH8Q96L42 1107 aa18.95■□□□□ 0.62
FANCA-219ENST00000566133 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
FANCA-219ENST00000566133 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
FANCA-219ENST00000566133 GLI2P10070 1586 aa18.93■□□□□ 0.62
FANCA-219ENST00000566133 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
FANCA-219ENST00000566133 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
FANCA-219ENST00000566133 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
FANCA-219ENST00000566133 ZCCHC11Q5TAX3 1644 aaKnown RBP18.87■□□□□ 0.61
FANCA-219ENST00000566133 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
FANCA-219ENST00000566133 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
FANCA-219ENST00000566133 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
FANCA-219ENST00000566133 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
FANCA-219ENST00000566133 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
FANCA-219ENST00000566133 ABCA8O94911 1581 aa18.81■□□□□ 0.6
FANCA-219ENST00000566133 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
FANCA-219ENST00000566133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
FANCA-219ENST00000566133 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
FANCA-219ENST00000566133 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
FANCA-219ENST00000566133 EEA1Q15075 1411 aa18.75■□□□□ 0.59
FANCA-219ENST00000566133 ATP10BO94823 1461 aa18.75■□□□□ 0.59
FANCA-219ENST00000566133 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
FANCA-219ENST00000566133 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
FANCA-219ENST00000566133 ADGRL1O94910 1474 aa18.66■□□□□ 0.58
FANCA-219ENST00000566133 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
FANCA-219ENST00000566133 UBTFP17480 764 aaKnown RBP18.66■□□□□ 0.58
FANCA-219ENST00000566133 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
FANCA-219ENST00000566133 SAMD9Q5K651 1589 aa18.64■□□□□ 0.58
FANCA-219ENST00000566133 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
FANCA-219ENST00000566133 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
FANCA-219ENST00000566133 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
FANCA-219ENST00000566133 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
FANCA-219ENST00000566133 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
FANCA-219ENST00000566133 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.56
FANCA-219ENST00000566133 ARAP3Q8WWN8 1544 aa18.57■□□□□ 0.56
FANCA-219ENST00000566133 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
FANCA-219ENST00000566133 KIF21BO75037 1637 aa18.52■□□□□ 0.56
FANCA-219ENST00000566133 NEO1Q92859 1461 aa18.5■□□□□ 0.55
FANCA-219ENST00000566133 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
FANCA-219ENST00000566133 EFCAB5A4FU69 1503 aa18.48■□□□□ 0.55
FANCA-219ENST00000566133 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
FANCA-219ENST00000566133 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
FANCA-219ENST00000566133 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
FANCA-219ENST00000566133 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
FANCA-219ENST00000566133 FANCAO15360 1455 aa18.4■□□□□ 0.54
FANCA-219ENST00000566133 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
FANCA-219ENST00000566133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.4■□□□□ 0.54
FANCA-219ENST00000566133 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.54
FANCA-219ENST00000566133 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
FANCA-219ENST00000566133 PLCH2O75038 1416 aa18.36■□□□□ 0.53
FANCA-219ENST00000566133 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
FANCA-219ENST00000566133 HECW2Q9P2P5 1572 aa18.35■□□□□ 0.53
FANCA-219ENST00000566133 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.53
FANCA-219ENST00000566133 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
FANCA-219ENST00000566133 FRMPD1Q5SYB0 1578 aa18.32■□□□□ 0.52
FANCA-219ENST00000566133 PTPRMP28827 1452 aa18.32■□□□□ 0.52
FANCA-219ENST00000566133 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
FANCA-219ENST00000566133 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
FANCA-219ENST00000566133 MLECQ14165 292 aa18.31■□□□□ 0.52
FANCA-219ENST00000566133 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
FANCA-219ENST00000566133 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
FANCA-219ENST00000566133 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
FANCA-219ENST00000566133 HECW1Q76N89 1606 aa18.28■□□□□ 0.52
FANCA-219ENST00000566133 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
FANCA-219ENST00000566133 CFAP74Q9C0B2 1584 aa18.28■□□□□ 0.52
FANCA-219ENST00000566133 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
FANCA-219ENST00000566133 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms