RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 RUSC2Q8N2Y8 1516 aa38.04■■■■□ 3.68
RPUSD1-206ENST00000565503 MAPKBP1O60336 1514 aa37.84■■■■□ 3.65
RPUSD1-206ENST00000565503 ABCC10Q5T3U5 1492 aa37.84■■■■□ 3.65
RPUSD1-206ENST00000565503 NPM1P06748 294 aaKnown RBP eCLIP37.8■■■■□ 3.64
RPUSD1-206ENST00000565503 KIAA0586Q9BVV6 1533 aa37.79■■■■□ 3.64
RPUSD1-206ENST00000565503 ADCY10Q96PN6 1610 aa37.79■■■■□ 3.64
RPUSD1-206ENST00000565503 CUL7Q14999 1698 aa37.79■■■■□ 3.64
RPUSD1-206ENST00000565503 FAM69CQ0P6D2 419 aa37.75■■■■□ 3.63
RPUSD1-206ENST00000565503 IGF1RP08069 1367 aa37.74■■■■□ 3.63
RPUSD1-206ENST00000565503 DIP2BQ9P265 1576 aa37.74■■■■□ 3.63
RPUSD1-206ENST00000565503 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
RPUSD1-206ENST00000565503 TSPOAP1O95153 1857 aa37.51■■■■□ 3.6
RPUSD1-206ENST00000565503 KDM6BO15054 1643 aa37.5■■■■□ 3.59
RPUSD1-206ENST00000565503 PTPRGP23470 1445 aa37.48■■■■□ 3.59
RPUSD1-206ENST00000565503 CARMIL1Q5VZK9 1371 aa37.48■■■■□ 3.59
RPUSD1-206ENST00000565503 CARMIL2Q6F5E8 1435 aa37.43■■■■□ 3.58
RPUSD1-206ENST00000565503 TNIKQ9UKE5 1360 aa37.41■■■■□ 3.58
RPUSD1-206ENST00000565503 IQGAP2Q13576 1575 aa37.38■■■■□ 3.58
RPUSD1-206ENST00000565503 ABCC2Q92887 1545 aa37.38■■■■□ 3.57
RPUSD1-206ENST00000565503 UHRF1BP1LA0JNW5 1464 aa37.28■■■■□ 3.56
RPUSD1-206ENST00000565503 PLB1Q6P1J6 1458 aa37.28■■■■□ 3.56
RPUSD1-206ENST00000565503 GLI2P10070 1586 aa37.27■■■■□ 3.56
RPUSD1-206ENST00000565503 TTBK1Q5TCY1 1321 aaPredicted RBP37.27■■■■□ 3.56
RPUSD1-206ENST00000565503 ASXL2Q76L83 1435 aa37.26■■■■□ 3.55
RPUSD1-206ENST00000565503 KDM4FA0A1W2PPD8 638 aa37.23■■■■□ 3.55
RPUSD1-206ENST00000565503 PPRC1Q5VV67 1664 aaKnown RBP37.21■■■■□ 3.55
RPUSD1-206ENST00000565503 DISP1Q96F81 1524 aa37.21■■■■□ 3.55
RPUSD1-206ENST00000565503 UACAQ9BZF9 1416 aa37.2■■■■□ 3.55
RPUSD1-206ENST00000565503 UGGT2Q9NYU1 1516 aa37.14■■■■□ 3.54
RPUSD1-206ENST00000565503 RAPGEF2Q9Y4G8 1499 aa37.13■■■■□ 3.53
RPUSD1-206ENST00000565503 KDM5BQ9UGL1 1544 aa37.1■■■■□ 3.53
RPUSD1-206ENST00000565503 KIAA0556O60303 1618 aa37.05■■■■□ 3.52
RPUSD1-206ENST00000565503 MAP3K4Q9Y6R4 1608 aa37.05■■■■□ 3.52
RPUSD1-206ENST00000565503 EPRSP07814 1512 aaKnown RBP37.05■■■■□ 3.52
RPUSD1-206ENST00000565503 ZCCHC11Q5TAX3 1644 aaKnown RBP37.03■■■■□ 3.52
RPUSD1-206ENST00000565503 TEX14Q8IWB6 1497 aa36.96■■■■□ 3.51
RPUSD1-206ENST00000565503 CTTNBP2Q8WZ74 1663 aa36.93■■■■□ 3.5
RPUSD1-206ENST00000565503 COL17A1Q9UMD9 1497 aaPredicted RBP36.91■■■■□ 3.5
RPUSD1-206ENST00000565503 ADGRL1O94910 1474 aa36.88■■■■□ 3.5
RPUSD1-206ENST00000565503 WDR7Q9Y4E6 1490 aa36.85■■■■□ 3.49
RPUSD1-206ENST00000565503 GOLGA3Q08378 1498 aa36.81■■■■□ 3.48
RPUSD1-206ENST00000565503 ABCA8O94911 1581 aa36.74■■■■□ 3.47
RPUSD1-206ENST00000565503 CFAP43Q8NDM7 1665 aa36.74■■■■□ 3.47
RPUSD1-206ENST00000565503 MAGI3Q5TCQ9 1506 aa36.68■■■■□ 3.46
RPUSD1-206ENST00000565503 CD109Q6YHK3 1445 aa36.65■■■■□ 3.46
RPUSD1-206ENST00000565503 PRXQ9BXM0 1461 aa36.64■■■■□ 3.46
RPUSD1-206ENST00000565503 KCNH8Q96L42 1107 aa36.56■■■■□ 3.44
RPUSD1-206ENST00000565503 HECW2Q9P2P5 1572 aa36.53■■■■□ 3.44
RPUSD1-206ENST00000565503 ILDR1Q86SU0 546 aaPredicted RBP36.48■■■■□ 3.43
RPUSD1-206ENST00000565503 FAM9AQ8IZU1 332 aaPredicted RBP36.45■■■■□ 3.43
RPUSD1-206ENST00000565503 ARAP3Q8WWN8 1544 aa36.42■■■■□ 3.42
RPUSD1-206ENST00000565503 ATP10BO94823 1461 aa36.38■■■■□ 3.41
RPUSD1-206ENST00000565503 KIF21BO75037 1637 aa36.38■■■■□ 3.41
RPUSD1-206ENST00000565503 ABCA9Q8IUA7 1624 aa36.36■■■■□ 3.41
RPUSD1-206ENST00000565503 SAMD9Q5K651 1589 aa36.33■■■■□ 3.41
RPUSD1-206ENST00000565503 PHLDB1Q86UU1 1377 aa36.32■■■■□ 3.4
RPUSD1-206ENST00000565503 P3H3Q8IVL6 736 aa36.3■■■■□ 3.4
RPUSD1-206ENST00000565503 ARID3CA6NKF2 412 aa36.28■■■■□ 3.4
RPUSD1-206ENST00000565503 RAPGEF6Q8TEU7 1601 aa36.27■■■■□ 3.4
RPUSD1-206ENST00000565503 CSRNP3Q8WYN3 585 aa36.21■■■■□ 3.39
RPUSD1-206ENST00000565503 NEO1Q92859 1461 aa36.19■■■■□ 3.38
RPUSD1-206ENST00000565503 ADAMTSL3P82987 1691 aa36.14■■■■□ 3.38
RPUSD1-206ENST00000565503 NUP153P49790 1475 aaKnown RBP36.1■■■■□ 3.37
RPUSD1-206ENST00000565503 RAPGEF3O95398 923 aa36.08■■■■□ 3.37
RPUSD1-206ENST00000565503 FRMPD1Q5SYB0 1578 aa36.07■■■■□ 3.37
RPUSD1-206ENST00000565503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.07■■■■□ 3.36
RPUSD1-206ENST00000565503 HNRNPUL2Q1KMD3 747 aaKnown RBP36.07■■■■□ 3.36
RPUSD1-206ENST00000565503 EEA1Q15075 1411 aa36.07■■■■□ 3.36
RPUSD1-206ENST00000565503 PTPRMP28827 1452 aa36.06■■■■□ 3.36
RPUSD1-206ENST00000565503 BCORL1Q5H9F3 1711 aa36.03■■■■□ 3.36
RPUSD1-206ENST00000565503 FHOD3Q2V2M9 1422 aa35.99■■■■□ 3.35
RPUSD1-206ENST00000565503 RICTORQ6R327 1708 aa35.94■■■■□ 3.34
RPUSD1-206ENST00000565503 CFAP74Q9C0B2 1584 aa35.93■■■■□ 3.34
RPUSD1-206ENST00000565503 ARHGEF40Q8TER5 1519 aa35.93■■■■□ 3.34
RPUSD1-206ENST00000565503 MADDQ8WXG6 1647 aa35.93■■■■□ 3.34
RPUSD1-206ENST00000565503 PLEKHD1A6NEE1 506 aa35.92■■■■□ 3.34
RPUSD1-206ENST00000565503 EFCAB5A4FU69 1503 aa35.9■■■■□ 3.34
RPUSD1-206ENST00000565503 DENND4BO75064 1496 aaPredicted RBP35.9■■■■□ 3.34
RPUSD1-206ENST00000565503 ARID4BQ4LE39 1312 aaPredicted RBP35.89■■■■□ 3.34
RPUSD1-206ENST00000565503 RANGAP1P46060 587 aaPredicted RBP35.89■■■■□ 3.34
RPUSD1-206ENST00000565503 AKNAQ7Z591 1439 aa35.87■■■■□ 3.33
RPUSD1-206ENST00000565503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.86■■■■□ 3.33
RPUSD1-206ENST00000565503 FANCAO15360 1455 aa35.86■■■■□ 3.33
RPUSD1-206ENST00000565503 PCF11O94913 1555 aaKnown RBP35.83■■■■□ 3.33
RPUSD1-206ENST00000565503 TTC37Q6PGP7 1564 aa35.81■■■■□ 3.32
RPUSD1-206ENST00000565503 ZMYM4Q5VZL5 1548 aa35.8■■■■□ 3.32
RPUSD1-206ENST00000565503 RIMS1Q86UR5 1692 aaKnown RBP35.8■■■■□ 3.32
RPUSD1-206ENST00000565503 FBXO41Q8TF61 875 aa35.79■■■■□ 3.32
RPUSD1-206ENST00000565503 LMTK3Q96Q04 1460 aa35.76■■■■□ 3.32
RPUSD1-206ENST00000565503 POGZQ7Z3K3 1410 aa35.73■■■■□ 3.31
RPUSD1-206ENST00000565503 ZFYVE16Q7Z3T8 1539 aa35.72■■■■□ 3.31
RPUSD1-206ENST00000565503 MAGI2Q86UL8 1455 aa35.71■■■■□ 3.31
RPUSD1-206ENST00000565503 CDK13Q14004 1512 aaKnown RBP35.69■■■■□ 3.3
RPUSD1-206ENST00000565503 SIGLEC1Q9BZZ2 1709 aa35.66■■■■□ 3.3
RPUSD1-206ENST00000565503 YEATS2Q9ULM3 1422 aa35.64■■■■□ 3.3
RPUSD1-206ENST00000565503 HECW1Q76N89 1606 aa35.64■■■■□ 3.3
RPUSD1-206ENST00000565503 PLCH2O75038 1416 aa35.62■■■■□ 3.29
RPUSD1-206ENST00000565503 FER1L4A9Z1Z3 1794 aa35.58■■■■□ 3.29
RPUSD1-206ENST00000565503 SCAPERQ9BY12 1400 aa35.57■■■■□ 3.29
RPUSD1-206ENST00000565503 MYO5CQ9NQX4 1742 aa35.57■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms