RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 SNAPC4Q5SXM2 1469 aa22.99■■□□□ 1.27
NIP7-206ENST00000565034 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
NIP7-206ENST00000565034 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
NIP7-206ENST00000565034 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
NIP7-206ENST00000565034 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
NIP7-206ENST00000565034 SAMD9Q5K651 1589 aa22.88■■□□□ 1.25
NIP7-206ENST00000565034 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
NIP7-206ENST00000565034 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
NIP7-206ENST00000565034 APLP2Q06481 763 aa22.8■■□□□ 1.24
NIP7-206ENST00000565034 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
NIP7-206ENST00000565034 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
NIP7-206ENST00000565034 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
NIP7-206ENST00000565034 MAP3K1Q13233 1512 aa22.75■■□□□ 1.23
NIP7-206ENST00000565034 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
NIP7-206ENST00000565034 CEP170Q5SW79 1584 aa22.74■■□□□ 1.23
NIP7-206ENST00000565034 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
NIP7-206ENST00000565034 NUP160Q12769 1436 aa22.73■■□□□ 1.23
NIP7-206ENST00000565034 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
NIP7-206ENST00000565034 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
NIP7-206ENST00000565034 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
NIP7-206ENST00000565034 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
NIP7-206ENST00000565034 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
NIP7-206ENST00000565034 CHD1O14646 1710 aa22.67■■□□□ 1.22
NIP7-206ENST00000565034 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
NIP7-206ENST00000565034 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
NIP7-206ENST00000565034 KIAA0556O60303 1618 aa22.64■■□□□ 1.21
NIP7-206ENST00000565034 FBLN2P98095 1184 aa22.62■■□□□ 1.21
NIP7-206ENST00000565034 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
NIP7-206ENST00000565034 HECW1Q76N89 1606 aa22.54■■□□□ 1.2
NIP7-206ENST00000565034 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
NIP7-206ENST00000565034 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
NIP7-206ENST00000565034 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
NIP7-206ENST00000565034 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
NIP7-206ENST00000565034 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
NIP7-206ENST00000565034 KANK4Q5T7N3 995 aaPredicted RBP22.49■■□□□ 1.19
NIP7-206ENST00000565034 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
NIP7-206ENST00000565034 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
NIP7-206ENST00000565034 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
NIP7-206ENST00000565034 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
NIP7-206ENST00000565034 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
NIP7-206ENST00000565034 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.17
NIP7-206ENST00000565034 RRBP1Q9P2E9 1410 aaKnown RBP22.39■■□□□ 1.17
NIP7-206ENST00000565034 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
NIP7-206ENST00000565034 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
NIP7-206ENST00000565034 SUPT6HQ7KZ85 1726 aaKnown RBP22.33■■□□□ 1.17
NIP7-206ENST00000565034 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.17
NIP7-206ENST00000565034 ABCA8O94911 1581 aa22.31■■□□□ 1.16
NIP7-206ENST00000565034 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
NIP7-206ENST00000565034 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
NIP7-206ENST00000565034 CDK13Q14004 1512 aaKnown RBP22.28■■□□□ 1.16
NIP7-206ENST00000565034 HRCP23327 699 aa22.26■■□□□ 1.15
NIP7-206ENST00000565034 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
NIP7-206ENST00000565034 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
NIP7-206ENST00000565034 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
NIP7-206ENST00000565034 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
NIP7-206ENST00000565034 PTPRGP23470 1445 aa22.23■■□□□ 1.15
NIP7-206ENST00000565034 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
NIP7-206ENST00000565034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
NIP7-206ENST00000565034 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
NIP7-206ENST00000565034 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
NIP7-206ENST00000565034 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
NIP7-206ENST00000565034 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
NIP7-206ENST00000565034 ADCY10Q96PN6 1610 aa22.15■■□□□ 1.14
NIP7-206ENST00000565034 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
NIP7-206ENST00000565034 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
NIP7-206ENST00000565034 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
NIP7-206ENST00000565034 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
NIP7-206ENST00000565034 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
NIP7-206ENST00000565034 ATP10BO94823 1461 aa22.09■■□□□ 1.13
NIP7-206ENST00000565034 MIA2Q96PC5 1412 aa22.07■■□□□ 1.12
NIP7-206ENST00000565034 PTPN23Q9H3S7 1636 aa22.07■■□□□ 1.12
NIP7-206ENST00000565034 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
NIP7-206ENST00000565034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
NIP7-206ENST00000565034 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
NIP7-206ENST00000565034 UHRF1BP1LA0JNW5 1464 aa22.07■■□□□ 1.12
NIP7-206ENST00000565034 TCOF1Q13428 1488 aaKnown RBP22.06■■□□□ 1.12
NIP7-206ENST00000565034 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
NIP7-206ENST00000565034 KIF14Q15058 1648 aa22.03■■□□□ 1.12
NIP7-206ENST00000565034 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
NIP7-206ENST00000565034 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
NIP7-206ENST00000565034 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
NIP7-206ENST00000565034 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
NIP7-206ENST00000565034 KDM5BQ9UGL1 1544 aa21.95■■□□□ 1.1
NIP7-206ENST00000565034 ITGAEP38570 1179 aa21.93■■□□□ 1.1
NIP7-206ENST00000565034 ABCC10Q5T3U5 1492 aa21.93■■□□□ 1.1
NIP7-206ENST00000565034 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
NIP7-206ENST00000565034 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
NIP7-206ENST00000565034 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
NIP7-206ENST00000565034 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
NIP7-206ENST00000565034 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
NIP7-206ENST00000565034 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
NIP7-206ENST00000565034 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.09
NIP7-206ENST00000565034 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
NIP7-206ENST00000565034 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
NIP7-206ENST00000565034 HFM1A2PYH4 1435 aa21.82■■□□□ 1.08
NIP7-206ENST00000565034 PTPRKQ15262 1439 aa21.82■■□□□ 1.08
NIP7-206ENST00000565034 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
NIP7-206ENST00000565034 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
NIP7-206ENST00000565034 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
NIP7-206ENST00000565034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms