RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 RUSC2Q8N2Y8 1516 aa32.15■■■□□ 2.74
CLN6-204ENST00000564752 AEBP2Q6ZN18 517 aaPredicted RBP32.13■■■□□ 2.73
CLN6-204ENST00000564752 KIAA0586Q9BVV6 1533 aa32.1■■■□□ 2.73
CLN6-204ENST00000564752 CUL7Q14999 1698 aa32.06■■■□□ 2.72
CLN6-204ENST00000564752 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
CLN6-204ENST00000564752 KIF13AQ9H1H9 1805 aa31.96■■■□□ 2.71
CLN6-204ENST00000564752 NPM1P06748 294 aaKnown RBP eCLIP31.95■■■□□ 2.71
CLN6-204ENST00000564752 FAM69CQ0P6D2 419 aa31.84■■■□□ 2.69
CLN6-204ENST00000564752 ADCY10Q96PN6 1610 aa31.83■■■□□ 2.69
CLN6-204ENST00000564752 ABCC10Q5T3U5 1492 aa31.82■■■□□ 2.68
CLN6-204ENST00000564752 PTPRGP23470 1445 aa31.82■■■□□ 2.68
CLN6-204ENST00000564752 MAPKBP1O60336 1514 aa31.8■■■□□ 2.68
CLN6-204ENST00000564752 CARMIL2Q6F5E8 1435 aa31.77■■■□□ 2.68
CLN6-204ENST00000564752 TNIKQ9UKE5 1360 aa31.76■■■□□ 2.67
CLN6-204ENST00000564752 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
CLN6-204ENST00000564752 RAPGEF2Q9Y4G8 1499 aa31.72■■■□□ 2.67
CLN6-204ENST00000564752 IQGAP2Q13576 1575 aa31.72■■■□□ 2.67
CLN6-204ENST00000564752 DIP2BQ9P265 1576 aa31.66■■■□□ 2.66
CLN6-204ENST00000564752 DISP1Q96F81 1524 aa31.63■■■□□ 2.65
CLN6-204ENST00000564752 ABCC2Q92887 1545 aa31.59■■■□□ 2.65
CLN6-204ENST00000564752 UGGT2Q9NYU1 1516 aa31.57■■■□□ 2.64
CLN6-204ENST00000564752 UHRF1BP1LA0JNW5 1464 aa31.56■■■□□ 2.64
CLN6-204ENST00000564752 UACAQ9BZF9 1416 aa31.56■■■□□ 2.64
CLN6-204ENST00000564752 TSPOAP1O95153 1857 aa31.54■■■□□ 2.64
CLN6-204ENST00000564752 ASXL2Q76L83 1435 aa31.49■■■□□ 2.63
CLN6-204ENST00000564752 PLB1Q6P1J6 1458 aa31.48■■■□□ 2.63
CLN6-204ENST00000564752 KDM6BO15054 1643 aa31.46■■■□□ 2.63
CLN6-204ENST00000564752 KIAA0556O60303 1618 aa31.43■■■□□ 2.62
CLN6-204ENST00000564752 PRXQ9BXM0 1461 aa31.43■■■□□ 2.62
CLN6-204ENST00000564752 KDM5BQ9UGL1 1544 aa31.41■■■□□ 2.62
CLN6-204ENST00000564752 GLI2P10070 1586 aa31.37■■■□□ 2.61
CLN6-204ENST00000564752 GOLGA3Q08378 1498 aa31.33■■■□□ 2.61
CLN6-204ENST00000564752 CTTNBP2Q8WZ74 1663 aa31.3■■■□□ 2.6
CLN6-204ENST00000564752 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
CLN6-204ENST00000564752 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
CLN6-204ENST00000564752 ZCCHC11Q5TAX3 1644 aaKnown RBP31.25■■■□□ 2.59
CLN6-204ENST00000564752 PPRC1Q5VV67 1664 aaKnown RBP31.22■■■□□ 2.59
CLN6-204ENST00000564752 KDM4FA0A1W2PPD8 638 aa31.19■■■□□ 2.58
CLN6-204ENST00000564752 WDR7Q9Y4E6 1490 aa31.17■■■□□ 2.58
CLN6-204ENST00000564752 ABCA8O94911 1581 aa31.17■■■□□ 2.58
CLN6-204ENST00000564752 MAP3K4Q9Y6R4 1608 aa31.14■■■□□ 2.58
CLN6-204ENST00000564752 P3H3Q8IVL6 736 aa31.12■■■□□ 2.57
CLN6-204ENST00000564752 COL17A1Q9UMD9 1497 aaPredicted RBP31.12■■■□□ 2.57
CLN6-204ENST00000564752 TEX14Q8IWB6 1497 aa31.11■■■□□ 2.57
CLN6-204ENST00000564752 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
CLN6-204ENST00000564752 KCNH8Q96L42 1107 aa31.09■■■□□ 2.57
CLN6-204ENST00000564752 EEA1Q15075 1411 aa31.07■■■□□ 2.56
CLN6-204ENST00000564752 CD109Q6YHK3 1445 aa31.02■■■□□ 2.56
CLN6-204ENST00000564752 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
CLN6-204ENST00000564752 ATP10BO94823 1461 aa30.97■■■□□ 2.55
CLN6-204ENST00000564752 MAGI3Q5TCQ9 1506 aa30.97■■■□□ 2.55
CLN6-204ENST00000564752 SAMD9Q5K651 1589 aa30.95■■■□□ 2.54
CLN6-204ENST00000564752 ADGRL1O94910 1474 aa30.93■■■□□ 2.54
CLN6-204ENST00000564752 CFAP43Q8NDM7 1665 aa30.9■■■□□ 2.54
CLN6-204ENST00000564752 RANGAP1P46060 587 aaPredicted RBP30.89■■■□□ 2.54
CLN6-204ENST00000564752 RAPGEF6Q8TEU7 1601 aa30.81■■■□□ 2.52
CLN6-204ENST00000564752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.8■■■□□ 2.52
CLN6-204ENST00000564752 HNRNPUL2Q1KMD3 747 aaKnown RBP30.8■■■□□ 2.52
CLN6-204ENST00000564752 FHOD3Q2V2M9 1422 aa30.8■■■□□ 2.52
CLN6-204ENST00000564752 NUP153P49790 1475 aaKnown RBP30.76■■■□□ 2.52
CLN6-204ENST00000564752 KIF21BO75037 1637 aa30.74■■■□□ 2.51
CLN6-204ENST00000564752 ARAP3Q8WWN8 1544 aa30.73■■■□□ 2.51
CLN6-204ENST00000564752 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
CLN6-204ENST00000564752 PHLDB1Q86UU1 1377 aa30.72■■■□□ 2.51
CLN6-204ENST00000564752 ABCA9Q8IUA7 1624 aa30.72■■■□□ 2.51
CLN6-204ENST00000564752 PLEKHD1A6NEE1 506 aa30.67■■■□□ 2.5
CLN6-204ENST00000564752 EFCAB5A4FU69 1503 aa30.67■■■□□ 2.5
CLN6-204ENST00000564752 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
CLN6-204ENST00000564752 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
CLN6-204ENST00000564752 EHMT2Q96KQ7 1210 aa30.61■■■□□ 2.49
CLN6-204ENST00000564752 NEO1Q92859 1461 aa30.61■■■□□ 2.49
CLN6-204ENST00000564752 RAPGEF3O95398 923 aa30.6■■■□□ 2.49
CLN6-204ENST00000564752 ILDR1Q86SU0 546 aaPredicted RBP30.59■■■□□ 2.49
CLN6-204ENST00000564752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.45■■■□□ 2.472e-6■■■■□ 19.9
CLN6-204ENST00000564752 FMN1Q68DA7 1419 aa30.45■■■□□ 2.46
CLN6-204ENST00000564752 ARHGAP35Q9NRY4 1499 aa30.44■■■□□ 2.46
CLN6-204ENST00000564752 AKNAQ7Z591 1439 aa30.44■■■□□ 2.46
CLN6-204ENST00000564752 CDK13Q14004 1512 aaKnown RBP30.43■■■□□ 2.46
CLN6-204ENST00000564752 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
CLN6-204ENST00000564752 FANCAO15360 1455 aa30.41■■■□□ 2.46
CLN6-204ENST00000564752 FRMPD1Q5SYB0 1578 aa30.41■■■□□ 2.46
CLN6-204ENST00000564752 DENND4BO75064 1496 aaPredicted RBP30.4■■■□□ 2.46
CLN6-204ENST00000564752 TTC37Q6PGP7 1564 aa30.36■■■□□ 2.45
CLN6-204ENST00000564752 CDK11AQ9UQ88 783 aaPredicted RBP30.35■■■□□ 2.45
CLN6-204ENST00000564752 ARID4BQ4LE39 1312 aaPredicted RBP30.33■■■□□ 2.45
CLN6-204ENST00000564752 PLCH2O75038 1416 aa30.32■■■□□ 2.44
CLN6-204ENST00000564752 HECW1Q76N89 1606 aa30.32■■■□□ 2.44
CLN6-204ENST00000564752 CFAP74Q9C0B2 1584 aa30.3■■■□□ 2.44
CLN6-204ENST00000564752 ADAMTSL3P82987 1691 aa30.28■■■□□ 2.44
CLN6-204ENST00000564752 RICTORQ6R327 1708 aa30.27■■■□□ 2.44
CLN6-204ENST00000564752 PTPRMP28827 1452 aa30.26■■■□□ 2.44
CLN6-204ENST00000564752 EFCAB2Q5VUJ9 269 aa30.24■■■□□ 2.43
CLN6-204ENST00000564752 SCAPERQ9BY12 1400 aa30.23■■■□□ 2.43
CLN6-204ENST00000564752 ARHGEF40Q8TER5 1519 aa30.23■■■□□ 2.43
CLN6-204ENST00000564752 BCORL1Q5H9F3 1711 aa30.21■■■□□ 2.43
CLN6-204ENST00000564752 ZMYM4Q5VZL5 1548 aa30.21■■■□□ 2.43
CLN6-204ENST00000564752 TROQ12816 1431 aaPredicted RBP30.21■■■□□ 2.43
CLN6-204ENST00000564752 MAGI2Q86UL8 1455 aa30.19■■■□□ 2.42
CLN6-204ENST00000564752 YEATS2Q9ULM3 1422 aa30.19■■■□□ 2.42
CLN6-204ENST00000564752 POGZQ7Z3K3 1410 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms