RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 IGF1RP08069 1367 aa11.99□□□□□ -0.49
MAP1LC3B-205ENST00000564638 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
MAP1LC3B-205ENST00000564638 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
MAP1LC3B-205ENST00000564638 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
MAP1LC3B-205ENST00000564638 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
MAP1LC3B-205ENST00000564638 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
MAP1LC3B-205ENST00000564638 ERCC6L2Q5T890 1561 aa11.94□□□□□ -0.5
MAP1LC3B-205ENST00000564638 EEA1Q15075 1411 aa11.94□□□□□ -0.5
MAP1LC3B-205ENST00000564638 KIF13AQ9H1H9 1805 aa11.93□□□□□ -0.5
MAP1LC3B-205ENST00000564638 NUP160Q12769 1436 aa11.91□□□□□ -0.5
MAP1LC3B-205ENST00000564638 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
MAP1LC3B-205ENST00000564638 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
MAP1LC3B-205ENST00000564638 PRXQ9BXM0 1461 aa11.84□□□□□ -0.51
MAP1LC3B-205ENST00000564638 KIAA0586Q9BVV6 1533 aa11.83□□□□□ -0.52
MAP1LC3B-205ENST00000564638 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
MAP1LC3B-205ENST00000564638 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
MAP1LC3B-205ENST00000564638 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
MAP1LC3B-205ENST00000564638 IQGAP2Q13576 1575 aa11.81□□□□□ -0.52
MAP1LC3B-205ENST00000564638 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
MAP1LC3B-205ENST00000564638 KIF21BO75037 1637 aa11.79□□□□□ -0.52
MAP1LC3B-205ENST00000564638 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
MAP1LC3B-205ENST00000564638 GOLGA3Q08378 1498 aa11.78□□□□□ -0.52
MAP1LC3B-205ENST00000564638 TTBK1Q5TCY1 1321 aaPredicted RBP11.74□□□□□ -0.53
MAP1LC3B-205ENST00000564638 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
MAP1LC3B-205ENST00000564638 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
MAP1LC3B-205ENST00000564638 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
MAP1LC3B-205ENST00000564638 HECW2Q9P2P5 1572 aa11.73□□□□□ -0.53
MAP1LC3B-205ENST00000564638 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
MAP1LC3B-205ENST00000564638 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
MAP1LC3B-205ENST00000564638 FAM69CQ0P6D2 419 aa11.72□□□□□ -0.53
MAP1LC3B-205ENST00000564638 UGGT2Q9NYU1 1516 aa11.71□□□□□ -0.53
MAP1LC3B-205ENST00000564638 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
MAP1LC3B-205ENST00000564638 KDM6BO15054 1643 aa11.7□□□□□ -0.54
MAP1LC3B-205ENST00000564638 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
MAP1LC3B-205ENST00000564638 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
MAP1LC3B-205ENST00000564638 DISP1Q96F81 1524 aa11.69□□□□□ -0.54
MAP1LC3B-205ENST00000564638 PCGF6Q9BYE7 350 aa11.68□□□□□ -0.54
MAP1LC3B-205ENST00000564638 PLPPR3Q6T4P5 718 aa11.67□□□□□ -0.54
MAP1LC3B-205ENST00000564638 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
MAP1LC3B-205ENST00000564638 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
MAP1LC3B-205ENST00000564638 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
MAP1LC3B-205ENST00000564638 PTPRGP23470 1445 aa11.66□□□□□ -0.54
MAP1LC3B-205ENST00000564638 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
MAP1LC3B-205ENST00000564638 MAPKBP1O60336 1514 aa11.65□□□□□ -0.55
MAP1LC3B-205ENST00000564638 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
MAP1LC3B-205ENST00000564638 ADCY10Q96PN6 1610 aa11.6□□□□□ -0.55
MAP1LC3B-205ENST00000564638 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
MAP1LC3B-205ENST00000564638 TSPOAP1O95153 1857 aa11.59□□□□□ -0.55
MAP1LC3B-205ENST00000564638 EFCAB5A4FU69 1503 aa11.59□□□□□ -0.55
MAP1LC3B-205ENST00000564638 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
MAP1LC3B-205ENST00000564638 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
MAP1LC3B-205ENST00000564638 UACAQ9BZF9 1416 aa11.58□□□□□ -0.56
MAP1LC3B-205ENST00000564638 CLIP1P30622 1438 aa11.57□□□□□ -0.56
MAP1LC3B-205ENST00000564638 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
MAP1LC3B-205ENST00000564638 PPRC1Q5VV67 1664 aaKnown RBP11.56□□□□□ -0.56
MAP1LC3B-205ENST00000564638 ILDR2Q71H61 639 aa11.56□□□□□ -0.56
MAP1LC3B-205ENST00000564638 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
MAP1LC3B-205ENST00000564638 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
MAP1LC3B-205ENST00000564638 UHRF1BP1LA0JNW5 1464 aa11.54□□□□□ -0.56
MAP1LC3B-205ENST00000564638 ABCA8O94911 1581 aa11.54□□□□□ -0.56
MAP1LC3B-205ENST00000564638 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
MAP1LC3B-205ENST00000564638 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
MAP1LC3B-205ENST00000564638 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
MAP1LC3B-205ENST00000564638 HRCP23327 699 aa11.52□□□□□ -0.57
MAP1LC3B-205ENST00000564638 ZCCHC11Q5TAX3 1644 aaKnown RBP11.52□□□□□ -0.57
MAP1LC3B-205ENST00000564638 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
MAP1LC3B-205ENST00000564638 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
MAP1LC3B-205ENST00000564638 KDM5BQ9UGL1 1544 aa11.49□□□□□ -0.57
MAP1LC3B-205ENST00000564638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
MAP1LC3B-205ENST00000564638 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
MAP1LC3B-205ENST00000564638 FMN1Q68DA7 1419 aa11.48□□□□□ -0.57
MAP1LC3B-205ENST00000564638 SOCS7O14512 581 aa11.47□□□□□ -0.57
MAP1LC3B-205ENST00000564638 ASXL2Q76L83 1435 aa11.46□□□□□ -0.57
MAP1LC3B-205ENST00000564638 HECW1Q76N89 1606 aa11.46□□□□□ -0.58
MAP1LC3B-205ENST00000564638 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
MAP1LC3B-205ENST00000564638 ATP10BO94823 1461 aa11.44□□□□□ -0.58
MAP1LC3B-205ENST00000564638 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
MAP1LC3B-205ENST00000564638 CDK13Q14004 1512 aaKnown RBP11.43□□□□□ -0.58
MAP1LC3B-205ENST00000564638 GLI2P10070 1586 aa11.42□□□□□ -0.58
MAP1LC3B-205ENST00000564638 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
MAP1LC3B-205ENST00000564638 WDR7Q9Y4E6 1490 aa11.42□□□□□ -0.58
MAP1LC3B-205ENST00000564638 KCNH8Q96L42 1107 aa11.41□□□□□ -0.58
MAP1LC3B-205ENST00000564638 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
MAP1LC3B-205ENST00000564638 CASKIN1Q8WXD9 1431 aa11.39□□□□□ -0.59
MAP1LC3B-205ENST00000564638 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
MAP1LC3B-205ENST00000564638 APLP2Q06481 763 aa11.38□□□□□ -0.59
MAP1LC3B-205ENST00000564638 FYCO1Q9BQS8 1478 aa11.38□□□□□ -0.59
MAP1LC3B-205ENST00000564638 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
MAP1LC3B-205ENST00000564638 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
MAP1LC3B-205ENST00000564638 CCDC18Q5T9S5 1454 aa11.35□□□□□ -0.59
MAP1LC3B-205ENST00000564638 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
MAP1LC3B-205ENST00000564638 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
MAP1LC3B-205ENST00000564638 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
MAP1LC3B-205ENST00000564638 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
MAP1LC3B-205ENST00000564638 FOXD1Q16676 465 aa11.31□□□□□ -0.6
MAP1LC3B-205ENST00000564638 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
MAP1LC3B-205ENST00000564638 ABCA9Q8IUA7 1624 aa11.31□□□□□ -0.6
MAP1LC3B-205ENST00000564638 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
MAP1LC3B-205ENST00000564638 KIF14Q15058 1648 aa11.3□□□□□ -0.6
MAP1LC3B-205ENST00000564638 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms