RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 CFAP43Q8NDM7 1665 aa24.93■■□□□ 1.58
CCNF-204ENST00000564333 PCF11O94913 1555 aaKnown RBP24.92■■□□□ 1.58
CCNF-204ENST00000564333 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
CCNF-204ENST00000564333 RRBP1Q9P2E9 1410 aaKnown RBP24.9■■□□□ 1.58
CCNF-204ENST00000564333 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.58
CCNF-204ENST00000564333 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
CCNF-204ENST00000564333 MRC2Q9UBG0 1479 aa24.86■■□□□ 1.57
CCNF-204ENST00000564333 FHOD3Q2V2M9 1422 aa24.82■■□□□ 1.56
CCNF-204ENST00000564333 FYCO1Q9BQS8 1478 aa24.8■■□□□ 1.56
CCNF-204ENST00000564333 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
CCNF-204ENST00000564333 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
CCNF-204ENST00000564333 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.562e-7■■■□□ 18.9
CCNF-204ENST00000564333 CCNB3Q8WWL7 1395 aa24.76■■□□□ 1.55
CCNF-204ENST00000564333 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
CCNF-204ENST00000564333 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
CCNF-204ENST00000564333 WDR62O43379 1518 aa24.73■■□□□ 1.55
CCNF-204ENST00000564333 ADAMTS12P58397 1594 aa24.72■■□□□ 1.55
CCNF-204ENST00000564333 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
CCNF-204ENST00000564333 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
CCNF-204ENST00000564333 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
CCNF-204ENST00000564333 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
CCNF-204ENST00000564333 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
CCNF-204ENST00000564333 LRRIQ1Q96JM4 1722 aa24.61■■□□□ 1.53
CCNF-204ENST00000564333 PHLDB1Q86UU1 1377 aa24.61■■□□□ 1.53
CCNF-204ENST00000564333 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
CCNF-204ENST00000564333 DHX57Q6P158 1386 aaKnown RBP24.59■■□□□ 1.53
CCNF-204ENST00000564333 IQGAP2Q13576 1575 aa24.58■■□□□ 1.53
CCNF-204ENST00000564333 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
CCNF-204ENST00000564333 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
CCNF-204ENST00000564333 CLSPNQ9HAW4 1339 aa24.55■■□□□ 1.52
CCNF-204ENST00000564333 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
CCNF-204ENST00000564333 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
CCNF-204ENST00000564333 ITGAEP38570 1179 aa24.49■■□□□ 1.51
CCNF-204ENST00000564333 HECW1Q76N89 1606 aa24.45■■□□□ 1.5
CCNF-204ENST00000564333 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
CCNF-204ENST00000564333 ZNF316A6NFI3 1004 aaPredicted RBP24.43■■□□□ 1.5
CCNF-204ENST00000564333 SUPT6HQ7KZ85 1726 aaKnown RBP24.43■■□□□ 1.5
CCNF-204ENST00000564333 DIEXFQ68CQ4 756 aaKnown RBP24.43■■□□□ 1.5
CCNF-204ENST00000564333 UGGT2Q9NYU1 1516 aa24.43■■□□□ 1.5
CCNF-204ENST00000564333 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
CCNF-204ENST00000564333 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
CCNF-204ENST00000564333 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
CCNF-204ENST00000564333 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
CCNF-204ENST00000564333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
CCNF-204ENST00000564333 FGD6Q6ZV73 1430 aa24.39■■□□□ 1.49
CCNF-204ENST00000564333 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
CCNF-204ENST00000564333 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
CCNF-204ENST00000564333 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
CCNF-204ENST00000564333 KIAA0556O60303 1618 aa24.34■■□□□ 1.49
CCNF-204ENST00000564333 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
CCNF-204ENST00000564333 KIAA0586Q9BVV6 1533 aa24.34■■□□□ 1.49
CCNF-204ENST00000564333 MAGI3Q5TCQ9 1506 aa24.33■■□□□ 1.48
CCNF-204ENST00000564333 MAPKBP1O60336 1514 aa24.32■■□□□ 1.48
CCNF-204ENST00000564333 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
CCNF-204ENST00000564333 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
CCNF-204ENST00000564333 MYOM3Q5VTT5 1437 aa24.3■■□□□ 1.48
CCNF-204ENST00000564333 EPRSP07814 1512 aaKnown RBP24.29■■□□□ 1.48
CCNF-204ENST00000564333 DISP1Q96F81 1524 aa24.27■■□□□ 1.48
CCNF-204ENST00000564333 PTPN23Q9H3S7 1636 aa24.25■■□□□ 1.47
CCNF-204ENST00000564333 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
CCNF-204ENST00000564333 CDK13Q14004 1512 aaKnown RBP24.24■■□□□ 1.47
CCNF-204ENST00000564333 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
CCNF-204ENST00000564333 CENPBP07199 599 aaPredicted RBP24.22■■□□□ 1.47
CCNF-204ENST00000564333 ACIN1Q9UKV3 1341 aaKnown RBP24.21■■□□□ 1.47
CCNF-204ENST00000564333 RAPGEF6Q8TEU7 1601 aa24.19■■□□□ 1.46
CCNF-204ENST00000564333 TCOF1Q13428 1488 aaKnown RBP24.16■■□□□ 1.46
CCNF-204ENST00000564333 PTPRKQ15262 1439 aa24.14■■□□□ 1.46
CCNF-204ENST00000564333 HFM1A2PYH4 1435 aa24.14■■□□□ 1.45
CCNF-204ENST00000564333 NUP153P49790 1475 aaKnown RBP24.11■■□□□ 1.45
CCNF-204ENST00000564333 NUP160Q12769 1436 aa24.11■■□□□ 1.45
CCNF-204ENST00000564333 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
CCNF-204ENST00000564333 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.45
CCNF-204ENST00000564333 MIA2Q96PC5 1412 aa24.05■■□□□ 1.44
CCNF-204ENST00000564333 NAIPQ13075 1403 aa24.05■■□□□ 1.44
CCNF-204ENST00000564333 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
CCNF-204ENST00000564333 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
CCNF-204ENST00000564333 FBLN2P98095 1184 aa24.01■■□□□ 1.43
CCNF-204ENST00000564333 NEUROD1Q13562 356 aa24■■□□□ 1.43
CCNF-204ENST00000564333 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
CCNF-204ENST00000564333 AKNAQ7Z591 1439 aa23.99■■□□□ 1.43
CCNF-204ENST00000564333 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
CCNF-204ENST00000564333 ADCY10Q96PN6 1610 aa23.96■■□□□ 1.43
CCNF-204ENST00000564333 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
CCNF-204ENST00000564333 ITSN2Q9NZM3 1697 aa23.94■■□□□ 1.42
CCNF-204ENST00000564333 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
CCNF-204ENST00000564333 MIER1Q8N108 512 aa23.93■■□□□ 1.42
CCNF-204ENST00000564333 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
CCNF-204ENST00000564333 JPH4Q96JJ6 628 aa23.9■■□□□ 1.42
CCNF-204ENST00000564333 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
CCNF-204ENST00000564333 CHD1O14646 1710 aa23.9■■□□□ 1.42
CCNF-204ENST00000564333 ABCA8O94911 1581 aa23.9■■□□□ 1.42
CCNF-204ENST00000564333 TIMELESSQ9UNS1 1208 aa23.9■■□□□ 1.42
CCNF-204ENST00000564333 KDM6BO15054 1643 aa23.88■■□□□ 1.41
CCNF-204ENST00000564333 KIF14Q15058 1648 aa23.87■■□□□ 1.41
CCNF-204ENST00000564333 DAPK1P53355 1430 aa23.86■■□□□ 1.41
CCNF-204ENST00000564333 PRG4Q92954 1404 aaPredicted RBP23.86■■□□□ 1.41
CCNF-204ENST00000564333 RRP7BPQ9NSQ0 103 aa23.84■■□□□ 1.41
CCNF-204ENST00000564333 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
CCNF-204ENST00000564333 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
CCNF-204ENST00000564333 CAMSAP2Q08AD1 1489 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms