RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
CFDP1-203ENST00000564286 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
CFDP1-203ENST00000564286 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
CFDP1-203ENST00000564286 NUP160Q12769 1436 aa19.12■□□□□ 0.65
CFDP1-203ENST00000564286 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
CFDP1-203ENST00000564286 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
CFDP1-203ENST00000564286 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
CFDP1-203ENST00000564286 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
CFDP1-203ENST00000564286 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
CFDP1-203ENST00000564286 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
CFDP1-203ENST00000564286 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
CFDP1-203ENST00000564286 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
CFDP1-203ENST00000564286 SHROOM2Q13796 1616 aa19■□□□□ 0.63
CFDP1-203ENST00000564286 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
CFDP1-203ENST00000564286 FAM69CQ0P6D2 419 aa18.91■□□□□ 0.62
CFDP1-203ENST00000564286 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
CFDP1-203ENST00000564286 ABCC10Q5T3U5 1492 aa18.83■□□□□ 0.6
CFDP1-203ENST00000564286 KIF13AQ9H1H9 1805 aa18.81■□□□□ 0.6
CFDP1-203ENST00000564286 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
CFDP1-203ENST00000564286 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
CFDP1-203ENST00000564286 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
CFDP1-203ENST00000564286 MAPKBP1O60336 1514 aa18.78■□□□□ 0.6
CFDP1-203ENST00000564286 IGF1RP08069 1367 aa18.78■□□□□ 0.6
CFDP1-203ENST00000564286 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
CFDP1-203ENST00000564286 DIP2BQ9P265 1576 aa18.72■□□□□ 0.59
CFDP1-203ENST00000564286 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
CFDP1-203ENST00000564286 PTPRGP23470 1445 aa18.71■□□□□ 0.59
CFDP1-203ENST00000564286 CUL7Q14999 1698 aa18.69■□□□□ 0.58
CFDP1-203ENST00000564286 CARMIL2Q6F5E8 1435 aa18.68■□□□□ 0.58
CFDP1-203ENST00000564286 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
CFDP1-203ENST00000564286 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
CFDP1-203ENST00000564286 KDM6BO15054 1643 aa18.66■□□□□ 0.58
CFDP1-203ENST00000564286 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
CFDP1-203ENST00000564286 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
CFDP1-203ENST00000564286 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
CFDP1-203ENST00000564286 PLB1Q6P1J6 1458 aa18.58■□□□□ 0.56
CFDP1-203ENST00000564286 TSPOAP1O95153 1857 aa18.57■□□□□ 0.56
CFDP1-203ENST00000564286 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
CFDP1-203ENST00000564286 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
CFDP1-203ENST00000564286 IQGAP2Q13576 1575 aa18.54■□□□□ 0.56
CFDP1-203ENST00000564286 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
CFDP1-203ENST00000564286 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
CFDP1-203ENST00000564286 GLI2P10070 1586 aa18.49■□□□□ 0.55
CFDP1-203ENST00000564286 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CFDP1-203ENST00000564286 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
CFDP1-203ENST00000564286 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
CFDP1-203ENST00000564286 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
CFDP1-203ENST00000564286 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
CFDP1-203ENST00000564286 KDM5BQ9UGL1 1544 aa18.43■□□□□ 0.54
CFDP1-203ENST00000564286 UGGT2Q9NYU1 1516 aa18.41■□□□□ 0.54
CFDP1-203ENST00000564286 ADGRL1O94910 1474 aa18.39■□□□□ 0.53
CFDP1-203ENST00000564286 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
CFDP1-203ENST00000564286 PPRC1Q5VV67 1664 aaKnown RBP18.38■□□□□ 0.53
CFDP1-203ENST00000564286 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
CFDP1-203ENST00000564286 KIAA0556O60303 1618 aa18.35■□□□□ 0.53
CFDP1-203ENST00000564286 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
CFDP1-203ENST00000564286 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
CFDP1-203ENST00000564286 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
CFDP1-203ENST00000564286 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.53
CFDP1-203ENST00000564286 KCNA4P22459 653 aa18.32■□□□□ 0.52
CFDP1-203ENST00000564286 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
CFDP1-203ENST00000564286 GOLGA3Q08378 1498 aa18.32■□□□□ 0.52
CFDP1-203ENST00000564286 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
CFDP1-203ENST00000564286 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CFDP1-203ENST00000564286 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
CFDP1-203ENST00000564286 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
CFDP1-203ENST00000564286 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
CFDP1-203ENST00000564286 ABCA8O94911 1581 aa18.2■□□□□ 0.5
CFDP1-203ENST00000564286 CFAP43Q8NDM7 1665 aa18.18■□□□□ 0.5
CFDP1-203ENST00000564286 HECW2Q9P2P5 1572 aa18.17■□□□□ 0.5
CFDP1-203ENST00000564286 ARID3CA6NKF2 412 aa18.17■□□□□ 0.5
CFDP1-203ENST00000564286 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
CFDP1-203ENST00000564286 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
CFDP1-203ENST00000564286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
CFDP1-203ENST00000564286 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
CFDP1-203ENST00000564286 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
CFDP1-203ENST00000564286 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
CFDP1-203ENST00000564286 ATP10BO94823 1461 aa18.1■□□□□ 0.49
CFDP1-203ENST00000564286 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
CFDP1-203ENST00000564286 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
CFDP1-203ENST00000564286 KIF21BO75037 1637 aa18.04■□□□□ 0.48
CFDP1-203ENST00000564286 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
CFDP1-203ENST00000564286 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
CFDP1-203ENST00000564286 ABCA9Q8IUA7 1624 aa18.01■□□□□ 0.47
CFDP1-203ENST00000564286 NEO1Q92859 1461 aa18.01■□□□□ 0.47
CFDP1-203ENST00000564286 PLEKHD1A6NEE1 506 aa17.98■□□□□ 0.47
CFDP1-203ENST00000564286 PTPRMP28827 1452 aa17.97■□□□□ 0.47
CFDP1-203ENST00000564286 RAPGEF6Q8TEU7 1601 aa17.97■□□□□ 0.47
CFDP1-203ENST00000564286 FBXO41Q8TF61 875 aa17.96■□□□□ 0.47
CFDP1-203ENST00000564286 SAMD9Q5K651 1589 aa17.96■□□□□ 0.46
CFDP1-203ENST00000564286 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
CFDP1-203ENST00000564286 NUP153P49790 1475 aaKnown RBP17.92■□□□□ 0.46
CFDP1-203ENST00000564286 EEA1Q15075 1411 aa17.91■□□□□ 0.46
CFDP1-203ENST00000564286 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
CFDP1-203ENST00000564286 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
CFDP1-203ENST00000564286 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
CFDP1-203ENST00000564286 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
CFDP1-203ENST00000564286 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
CFDP1-203ENST00000564286 FANCAO15360 1455 aa17.86■□□□□ 0.45
CFDP1-203ENST00000564286 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms