RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RUSC2Q8N2Y8 1516 aa31.94■■■□□ 2.7
SYNGR3-203ENST00000563869 ABCC10Q5T3U5 1492 aa31.83■■■□□ 2.69
SYNGR3-203ENST00000563869 MAPKBP1O60336 1514 aa31.81■■■□□ 2.68
SYNGR3-203ENST00000563869 NPM1P06748 294 aaKnown RBP eCLIP31.8■■■□□ 2.68
SYNGR3-203ENST00000563869 FAM69CQ0P6D2 419 aa31.78■■■□□ 2.68
SYNGR3-203ENST00000563869 ADCY10Q96PN6 1610 aa31.75■■■□□ 2.67
SYNGR3-203ENST00000563869 DIP2BQ9P265 1576 aa31.75■■■□□ 2.67
SYNGR3-203ENST00000563869 KIAA0586Q9BVV6 1533 aa31.72■■■□□ 2.67
SYNGR3-203ENST00000563869 KIF27Q86VH2 1401 aa31.68■■■□□ 2.66
SYNGR3-203ENST00000563869 CUL7Q14999 1698 aa31.67■■■□□ 2.66
SYNGR3-203ENST00000563869 IGF1RP08069 1367 aa31.66■■■□□ 2.66
SYNGR3-203ENST00000563869 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
SYNGR3-203ENST00000563869 KDM6BO15054 1643 aa31.58■■■□□ 2.65
SYNGR3-203ENST00000563869 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
SYNGR3-203ENST00000563869 EEA1Q15075 1411 aa31.51■■■□□ 2.64
SYNGR3-203ENST00000563869 PTPRGP23470 1445 aa31.49■■■□□ 2.63
SYNGR3-203ENST00000563869 CARMIL1Q5VZK9 1371 aa31.43■■■□□ 2.62
SYNGR3-203ENST00000563869 CARMIL2Q6F5E8 1435 aa31.41■■■□□ 2.62
SYNGR3-203ENST00000563869 KDM4FA0A1W2PPD8 638 aa31.41■■■□□ 2.62
SYNGR3-203ENST00000563869 TNIKQ9UKE5 1360 aa31.41■■■□□ 2.62
SYNGR3-203ENST00000563869 ABCC2Q92887 1545 aa31.39■■■□□ 2.62
SYNGR3-203ENST00000563869 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
SYNGR3-203ENST00000563869 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
SYNGR3-203ENST00000563869 GLI2P10070 1586 aa31.33■■■□□ 2.61
SYNGR3-203ENST00000563869 PLB1Q6P1J6 1458 aa31.33■■■□□ 2.61
SYNGR3-203ENST00000563869 ASXL2Q76L83 1435 aa31.31■■■□□ 2.6
SYNGR3-203ENST00000563869 PPRC1Q5VV67 1664 aaKnown RBP31.3■■■□□ 2.6
SYNGR3-203ENST00000563869 UHRF1BP1LA0JNW5 1464 aa31.3■■■□□ 2.6
SYNGR3-203ENST00000563869 UACAQ9BZF9 1416 aa31.24■■■□□ 2.59
SYNGR3-203ENST00000563869 DISP1Q96F81 1524 aa31.24■■■□□ 2.59
SYNGR3-203ENST00000563869 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
SYNGR3-203ENST00000563869 KDM5BQ9UGL1 1544 aa31.17■■■□□ 2.58
SYNGR3-203ENST00000563869 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
SYNGR3-203ENST00000563869 UGGT2Q9NYU1 1516 aa31.15■■■□□ 2.58
SYNGR3-203ENST00000563869 MAP3K4Q9Y6R4 1608 aa31.14■■■□□ 2.58
SYNGR3-203ENST00000563869 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
SYNGR3-203ENST00000563869 ZCCHC11Q5TAX3 1644 aaKnown RBP31.1■■■□□ 2.57
SYNGR3-203ENST00000563869 PRXQ9BXM0 1461 aa31.1■■■□□ 2.57
SYNGR3-203ENST00000563869 KIAA0556O60303 1618 aa31.09■■■□□ 2.57
SYNGR3-203ENST00000563869 ADGRL1O94910 1474 aa31.08■■■□□ 2.57
SYNGR3-203ENST00000563869 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
SYNGR3-203ENST00000563869 TEX14Q8IWB6 1497 aa31.07■■■□□ 2.56
SYNGR3-203ENST00000563869 KIF21BO75037 1637 aa31.06■■■□□ 2.56
SYNGR3-203ENST00000563869 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
SYNGR3-203ENST00000563869 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.54
SYNGR3-203ENST00000563869 CTTNBP2Q8WZ74 1663 aa30.94■■■□□ 2.54
SYNGR3-203ENST00000563869 ILDR1Q86SU0 546 aaPredicted RBP30.87■■■□□ 2.53
SYNGR3-203ENST00000563869 GOLGA3Q08378 1498 aa30.87■■■□□ 2.53
SYNGR3-203ENST00000563869 CFAP43Q8NDM7 1665 aa30.85■■■□□ 2.53
SYNGR3-203ENST00000563869 ABCA8O94911 1581 aa30.83■■■□□ 2.53
SYNGR3-203ENST00000563869 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
SYNGR3-203ENST00000563869 CD109Q6YHK3 1445 aa30.81■■■□□ 2.52
SYNGR3-203ENST00000563869 HECW2Q9P2P5 1572 aa30.8■■■□□ 2.52
SYNGR3-203ENST00000563869 KCNH8Q96L42 1107 aa30.73■■■□□ 2.51
SYNGR3-203ENST00000563869 UBTFP17480 764 aaKnown RBP30.66■■■□□ 2.5
SYNGR3-203ENST00000563869 ARAP3Q8WWN8 1544 aa30.6■■■□□ 2.49
SYNGR3-203ENST00000563869 ATP10BO94823 1461 aa30.56■■■□□ 2.48
SYNGR3-203ENST00000563869 EFCAB5A4FU69 1503 aa30.53■■■□□ 2.48
SYNGR3-203ENST00000563869 ABCA9Q8IUA7 1624 aa30.53■■■□□ 2.48
SYNGR3-203ENST00000563869 PHLDB1Q86UU1 1377 aa30.49■■■□□ 2.47
SYNGR3-203ENST00000563869 ARID3CA6NKF2 412 aa30.48■■■□□ 2.47
SYNGR3-203ENST00000563869 P3H3Q8IVL6 736 aa30.48■■■□□ 2.47
SYNGR3-203ENST00000563869 SAMD9Q5K651 1589 aa30.46■■■□□ 2.47
SYNGR3-203ENST00000563869 RAPGEF6Q8TEU7 1601 aa30.43■■■□□ 2.46
SYNGR3-203ENST00000563869 ADAMTSL3P82987 1691 aa30.41■■■□□ 2.46
SYNGR3-203ENST00000563869 NEO1Q92859 1461 aa30.39■■■□□ 2.46
SYNGR3-203ENST00000563869 EHMT2Q96KQ7 1210 aa30.38■■■□□ 2.45
SYNGR3-203ENST00000563869 PTPRMP28827 1452 aa30.36■■■□□ 2.45
SYNGR3-203ENST00000563869 RAPGEF3O95398 923 aa30.35■■■□□ 2.45
SYNGR3-203ENST00000563869 FRMPD1Q5SYB0 1578 aa30.32■■■□□ 2.44
SYNGR3-203ENST00000563869 BCORL1Q5H9F3 1711 aa30.3■■■□□ 2.44
SYNGR3-203ENST00000563869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.3■■■□□ 2.44
SYNGR3-203ENST00000563869 HNRNPUL2Q1KMD3 747 aaKnown RBP30.3■■■□□ 2.44
SYNGR3-203ENST00000563869 NUP153P49790 1475 aaKnown RBP30.28■■■□□ 2.44
SYNGR3-203ENST00000563869 CLIP1P30622 1438 aa30.26■■■□□ 2.43
SYNGR3-203ENST00000563869 FMN1Q68DA7 1419 aa30.23■■■□□ 2.43
SYNGR3-203ENST00000563869 MADDQ8WXG6 1647 aa30.23■■■□□ 2.43
SYNGR3-203ENST00000563869 ARHGAP35Q9NRY4 1499 aa30.23■■■□□ 2.43
SYNGR3-203ENST00000563869 FBXO41Q8TF61 875 aa30.22■■■□□ 2.43
SYNGR3-203ENST00000563869 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
SYNGR3-203ENST00000563869 CEP162Q5TB80 1403 aa30.21■■■□□ 2.43
SYNGR3-203ENST00000563869 RANGAP1P46060 587 aaPredicted RBP30.2■■■□□ 2.43
SYNGR3-203ENST00000563869 ARID4BQ4LE39 1312 aaPredicted RBP30.19■■■□□ 2.42
SYNGR3-203ENST00000563869 RICTORQ6R327 1708 aa30.19■■■□□ 2.42
SYNGR3-203ENST00000563869 ARHGEF40Q8TER5 1519 aa30.18■■■□□ 2.42
SYNGR3-203ENST00000563869 FHOD3Q2V2M9 1422 aa30.18■■■□□ 2.42
SYNGR3-203ENST00000563869 PCF11O94913 1555 aaKnown RBP30.16■■■□□ 2.42
SYNGR3-203ENST00000563869 DENND4BO75064 1496 aaPredicted RBP30.16■■■□□ 2.42
SYNGR3-203ENST00000563869 CFAP74Q9C0B2 1584 aa30.15■■■□□ 2.42
SYNGR3-203ENST00000563869 PLEKHD1A6NEE1 506 aa30.15■■■□□ 2.42
SYNGR3-203ENST00000563869 AKNAQ7Z591 1439 aa30.13■■■□□ 2.41
SYNGR3-203ENST00000563869 RIMS1Q86UR5 1692 aaKnown RBP30.12■■■□□ 2.41
SYNGR3-203ENST00000563869 LMTK3Q96Q04 1460 aa30.12■■■□□ 2.41
SYNGR3-203ENST00000563869 FANCAO15360 1455 aa30.11■■■□□ 2.41
SYNGR3-203ENST00000563869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.11■■■□□ 2.41
SYNGR3-203ENST00000563869 ZMYM4Q5VZL5 1548 aa30.06■■■□□ 2.4
SYNGR3-203ENST00000563869 TTC37Q6PGP7 1564 aa30.05■■■□□ 2.4
SYNGR3-203ENST00000563869 POGZQ7Z3K3 1410 aa30.02■■■□□ 2.4
SYNGR3-203ENST00000563869 HECW1Q76N89 1606 aa30.01■■■□□ 2.39
SYNGR3-203ENST00000563869 ZFYVE16Q7Z3T8 1539 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms