RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.34
SCAMP2-204ENST00000563829 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
SCAMP2-204ENST00000563829 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
SCAMP2-204ENST00000563829 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-204ENST00000563829 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
SCAMP2-204ENST00000563829 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-204ENST00000563829 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
SCAMP2-204ENST00000563829 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
SCAMP2-204ENST00000563829 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
SCAMP2-204ENST00000563829 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-204ENST00000563829 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.33
SCAMP2-204ENST00000563829 CUX2O14529 1486 aa17.08■□□□□ 0.32
SCAMP2-204ENST00000563829 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
SCAMP2-204ENST00000563829 ARAP1Q96P48 1450 aa17.02■□□□□ 0.31
SCAMP2-204ENST00000563829 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
SCAMP2-204ENST00000563829 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
SCAMP2-204ENST00000563829 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
SCAMP2-204ENST00000563829 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
SCAMP2-204ENST00000563829 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-204ENST00000563829 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
SCAMP2-204ENST00000563829 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
SCAMP2-204ENST00000563829 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
SCAMP2-204ENST00000563829 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
SCAMP2-204ENST00000563829 UBE2Q2Q8WVN8 375 aa16.87■□□□□ 0.29
SCAMP2-204ENST00000563829 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
SCAMP2-204ENST00000563829 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
SCAMP2-204ENST00000563829 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.29
SCAMP2-204ENST00000563829 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
SCAMP2-204ENST00000563829 NEFMP07197 916 aa16.81■□□□□ 0.28
SCAMP2-204ENST00000563829 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
SCAMP2-204ENST00000563829 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
SCAMP2-204ENST00000563829 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
SCAMP2-204ENST00000563829 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
SCAMP2-204ENST00000563829 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
SCAMP2-204ENST00000563829 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
SCAMP2-204ENST00000563829 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
SCAMP2-204ENST00000563829 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
SCAMP2-204ENST00000563829 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
SCAMP2-204ENST00000563829 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
SCAMP2-204ENST00000563829 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
SCAMP2-204ENST00000563829 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
SCAMP2-204ENST00000563829 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.26
SCAMP2-204ENST00000563829 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
SCAMP2-204ENST00000563829 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
SCAMP2-204ENST00000563829 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
SCAMP2-204ENST00000563829 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
SCAMP2-204ENST00000563829 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
SCAMP2-204ENST00000563829 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
SCAMP2-204ENST00000563829 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
SCAMP2-204ENST00000563829 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
SCAMP2-204ENST00000563829 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCAMP2-204ENST00000563829 CNTLNQ9NXG0 1405 aa16.61■□□□□ 0.25
SCAMP2-204ENST00000563829 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCAMP2-204ENST00000563829 P3H3Q8IVL6 736 aa16.61■□□□□ 0.25
SCAMP2-204ENST00000563829 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
SCAMP2-204ENST00000563829 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
SCAMP2-204ENST00000563829 GSE1Q14687 1217 aa16.59■□□□□ 0.25
SCAMP2-204ENST00000563829 PDE4AP27815 886 aa16.57■□□□□ 0.24
SCAMP2-204ENST00000563829 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
SCAMP2-204ENST00000563829 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
SCAMP2-204ENST00000563829 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
SCAMP2-204ENST00000563829 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
SCAMP2-204ENST00000563829 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
SCAMP2-204ENST00000563829 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.24
SCAMP2-204ENST00000563829 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.23
SCAMP2-204ENST00000563829 MAP3K1Q13233 1512 aa16.52■□□□□ 0.23
SCAMP2-204ENST00000563829 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
SCAMP2-204ENST00000563829 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
SCAMP2-204ENST00000563829 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
SCAMP2-204ENST00000563829 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
SCAMP2-204ENST00000563829 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
SCAMP2-204ENST00000563829 NFKBIBQ15653 356 aa16.49■□□□□ 0.23
SCAMP2-204ENST00000563829 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
SCAMP2-204ENST00000563829 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
SCAMP2-204ENST00000563829 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
SCAMP2-204ENST00000563829 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
SCAMP2-204ENST00000563829 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
SCAMP2-204ENST00000563829 POLR3GLQ9BT43 218 aa16.48■□□□□ 0.23
SCAMP2-204ENST00000563829 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■■■□□ 17.7
SCAMP2-204ENST00000563829 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
SCAMP2-204ENST00000563829 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
SCAMP2-204ENST00000563829 DAXXQ9UER7 740 aaPredicted RBP16.43■□□□□ 0.22
SCAMP2-204ENST00000563829 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
SCAMP2-204ENST00000563829 NCOA1Q15788 1441 aa16.43■□□□□ 0.22
SCAMP2-204ENST00000563829 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
SCAMP2-204ENST00000563829 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
SCAMP2-204ENST00000563829 KIF7Q2M1P5 1343 aa16.42■□□□□ 0.22
SCAMP2-204ENST00000563829 DDRGK1Q96HY6 314 aa16.41■□□□□ 0.22
SCAMP2-204ENST00000563829 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
SCAMP2-204ENST00000563829 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
SCAMP2-204ENST00000563829 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
SCAMP2-204ENST00000563829 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SCAMP2-204ENST00000563829 FGD6Q6ZV73 1430 aa16.39■□□□□ 0.21
SCAMP2-204ENST00000563829 CUX1P39880 1505 aa16.39■□□□□ 0.21
SCAMP2-204ENST00000563829 FOXD1Q16676 465 aa16.39■□□□□ 0.21
SCAMP2-204ENST00000563829 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-204ENST00000563829 MS4A1P11836 297 aa16.38■□□□□ 0.21
SCAMP2-204ENST00000563829 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
SCAMP2-204ENST00000563829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCAMP2-204ENST00000563829 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms