RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 NUP160Q12769 1436 aa17.23■□□□□ 0.35
VAC14-204ENST00000563662 MSH5O43196 834 aa17.23■□□□□ 0.35
VAC14-204ENST00000563662 IGF1RP08069 1367 aa17.22■□□□□ 0.35
VAC14-204ENST00000563662 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
VAC14-204ENST00000563662 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
VAC14-204ENST00000563662 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
VAC14-204ENST00000563662 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
VAC14-204ENST00000563662 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
VAC14-204ENST00000563662 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
VAC14-204ENST00000563662 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
VAC14-204ENST00000563662 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
VAC14-204ENST00000563662 CUL7Q14999 1698 aa17.01■□□□□ 0.31
VAC14-204ENST00000563662 SHROOM2Q13796 1616 aa17■□□□□ 0.31
VAC14-204ENST00000563662 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
VAC14-204ENST00000563662 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.3
VAC14-204ENST00000563662 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
VAC14-204ENST00000563662 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
VAC14-204ENST00000563662 PTPRGP23470 1445 aa16.92■□□□□ 0.3
VAC14-204ENST00000563662 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
VAC14-204ENST00000563662 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
VAC14-204ENST00000563662 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
VAC14-204ENST00000563662 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
VAC14-204ENST00000563662 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.28
VAC14-204ENST00000563662 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
VAC14-204ENST00000563662 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
VAC14-204ENST00000563662 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
VAC14-204ENST00000563662 EEA1Q15075 1411 aa16.79■□□□□ 0.28
VAC14-204ENST00000563662 UACAQ9BZF9 1416 aa16.76■□□□□ 0.27
VAC14-204ENST00000563662 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
VAC14-204ENST00000563662 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
VAC14-204ENST00000563662 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
VAC14-204ENST00000563662 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
VAC14-204ENST00000563662 DISP1Q96F81 1524 aa16.74■□□□□ 0.27
VAC14-204ENST00000563662 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
VAC14-204ENST00000563662 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
VAC14-204ENST00000563662 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
VAC14-204ENST00000563662 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
VAC14-204ENST00000563662 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
VAC14-204ENST00000563662 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
VAC14-204ENST00000563662 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
VAC14-204ENST00000563662 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
VAC14-204ENST00000563662 P3H3Q8IVL6 736 aa16.61■□□□□ 0.25
VAC14-204ENST00000563662 KCNA4P22459 653 aa16.59■□□□□ 0.25
VAC14-204ENST00000563662 DIP2BQ9P265 1576 aa16.57■□□□□ 0.24
VAC14-204ENST00000563662 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
VAC14-204ENST00000563662 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
VAC14-204ENST00000563662 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
VAC14-204ENST00000563662 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
VAC14-204ENST00000563662 GLI2P10070 1586 aa16.52■□□□□ 0.24
VAC14-204ENST00000563662 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
VAC14-204ENST00000563662 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
VAC14-204ENST00000563662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
VAC14-204ENST00000563662 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
VAC14-204ENST00000563662 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
VAC14-204ENST00000563662 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
VAC14-204ENST00000563662 ABCA8O94911 1581 aa16.48■□□□□ 0.23
VAC14-204ENST00000563662 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
VAC14-204ENST00000563662 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
VAC14-204ENST00000563662 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
VAC14-204ENST00000563662 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
VAC14-204ENST00000563662 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
VAC14-204ENST00000563662 ATP10BO94823 1461 aa16.44■□□□□ 0.22
VAC14-204ENST00000563662 KIF21BO75037 1637 aa16.44■□□□□ 0.22
VAC14-204ENST00000563662 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
VAC14-204ENST00000563662 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
VAC14-204ENST00000563662 KDM6BO15054 1643 aa16.41■□□□□ 0.22
VAC14-204ENST00000563662 SAMD9Q5K651 1589 aa16.41■□□□□ 0.22
VAC14-204ENST00000563662 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
VAC14-204ENST00000563662 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
VAC14-204ENST00000563662 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
VAC14-204ENST00000563662 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
VAC14-204ENST00000563662 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
VAC14-204ENST00000563662 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
VAC14-204ENST00000563662 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
VAC14-204ENST00000563662 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
VAC14-204ENST00000563662 RAPGEF6Q8TEU7 1601 aa16.33■□□□□ 0.2
VAC14-204ENST00000563662 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.2
VAC14-204ENST00000563662 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
VAC14-204ENST00000563662 NUP153P49790 1475 aaKnown RBP16.32■□□□□ 0.2
VAC14-204ENST00000563662 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
VAC14-204ENST00000563662 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
VAC14-204ENST00000563662 CFAP43Q8NDM7 1665 aa16.27■□□□□ 0.19
VAC14-204ENST00000563662 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
VAC14-204ENST00000563662 PPRC1Q5VV67 1664 aaKnown RBP16.25■□□□□ 0.19
VAC14-204ENST00000563662 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
VAC14-204ENST00000563662 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
VAC14-204ENST00000563662 NEO1Q92859 1461 aa16.23■□□□□ 0.19
VAC14-204ENST00000563662 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
VAC14-204ENST00000563662 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
VAC14-204ENST00000563662 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
VAC14-204ENST00000563662 CLIP1P30622 1438 aa16.17■□□□□ 0.18
VAC14-204ENST00000563662 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
VAC14-204ENST00000563662 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
VAC14-204ENST00000563662 PLCH2O75038 1416 aa16.15■□□□□ 0.18
VAC14-204ENST00000563662 CASKIN1Q8WXD9 1431 aa16.15■□□□□ 0.18
VAC14-204ENST00000563662 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
VAC14-204ENST00000563662 FANCAO15360 1455 aa16.14■□□□□ 0.17
VAC14-204ENST00000563662 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
VAC14-204ENST00000563662 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
VAC14-204ENST00000563662 TROQ12816 1431 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms