RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
FANCA-211ENST00000563510 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
FANCA-211ENST00000563510 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
FANCA-211ENST00000563510 NUP160Q12769 1436 aa19.25■□□□□ 0.67
FANCA-211ENST00000563510 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
FANCA-211ENST00000563510 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
FANCA-211ENST00000563510 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
FANCA-211ENST00000563510 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
FANCA-211ENST00000563510 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
FANCA-211ENST00000563510 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
FANCA-211ENST00000563510 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
FANCA-211ENST00000563510 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
FANCA-211ENST00000563510 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
FANCA-211ENST00000563510 CUL7Q14999 1698 aa19.01■□□□□ 0.63
FANCA-211ENST00000563510 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
FANCA-211ENST00000563510 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
FANCA-211ENST00000563510 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
FANCA-211ENST00000563510 DIP2BQ9P265 1576 aa18.92■□□□□ 0.62
FANCA-211ENST00000563510 ABCC10Q5T3U5 1492 aa18.91■□□□□ 0.62
FANCA-211ENST00000563510 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
FANCA-211ENST00000563510 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
FANCA-211ENST00000563510 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
FANCA-211ENST00000563510 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
FANCA-211ENST00000563510 TSPOAP1O95153 1857 aa18.84■□□□□ 0.61
FANCA-211ENST00000563510 FAM69CQ0P6D2 419 aa18.82■□□□□ 0.6
FANCA-211ENST00000563510 KDM6BO15054 1643 aa18.82■□□□□ 0.6
FANCA-211ENST00000563510 IGF1RP08069 1367 aa18.81■□□□□ 0.6
FANCA-211ENST00000563510 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
FANCA-211ENST00000563510 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
FANCA-211ENST00000563510 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
FANCA-211ENST00000563510 MSH5O43196 834 aa18.74■□□□□ 0.59
FANCA-211ENST00000563510 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
FANCA-211ENST00000563510 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
FANCA-211ENST00000563510 PTPRGP23470 1445 aa18.72■□□□□ 0.59
FANCA-211ENST00000563510 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
FANCA-211ENST00000563510 ABCC2Q92887 1545 aa18.7■□□□□ 0.58
FANCA-211ENST00000563510 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
FANCA-211ENST00000563510 GLI2P10070 1586 aa18.67■□□□□ 0.58
FANCA-211ENST00000563510 PPRC1Q5VV67 1664 aaKnown RBP18.66■□□□□ 0.58
FANCA-211ENST00000563510 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
FANCA-211ENST00000563510 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
FANCA-211ENST00000563510 ASXL2Q76L83 1435 aa18.62■□□□□ 0.57
FANCA-211ENST00000563510 CTTNBP2Q8WZ74 1663 aa18.62■□□□□ 0.57
FANCA-211ENST00000563510 DISP1Q96F81 1524 aa18.61■□□□□ 0.57
FANCA-211ENST00000563510 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
FANCA-211ENST00000563510 UACAQ9BZF9 1416 aa18.6■□□□□ 0.57
FANCA-211ENST00000563510 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
FANCA-211ENST00000563510 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
FANCA-211ENST00000563510 MAP3K4Q9Y6R4 1608 aa18.6■□□□□ 0.57
FANCA-211ENST00000563510 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
FANCA-211ENST00000563510 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.57
FANCA-211ENST00000563510 KDM5BQ9UGL1 1544 aa18.57■□□□□ 0.56
FANCA-211ENST00000563510 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
FANCA-211ENST00000563510 TEX14Q8IWB6 1497 aa18.52■□□□□ 0.56
FANCA-211ENST00000563510 KDM4FA0A1W2PPD8 638 aa18.52■□□□□ 0.56
FANCA-211ENST00000563510 CFAP43Q8NDM7 1665 aa18.47■□□□□ 0.55
FANCA-211ENST00000563510 ADGRL1O94910 1474 aa18.46■□□□□ 0.54
FANCA-211ENST00000563510 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
FANCA-211ENST00000563510 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
FANCA-211ENST00000563510 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
FANCA-211ENST00000563510 ABCA8O94911 1581 aa18.41■□□□□ 0.54
FANCA-211ENST00000563510 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.54
FANCA-211ENST00000563510 MAGI3Q5TCQ9 1506 aa18.35■□□□□ 0.53
FANCA-211ENST00000563510 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
FANCA-211ENST00000563510 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
FANCA-211ENST00000563510 HECW2Q9P2P5 1572 aa18.29■□□□□ 0.52
FANCA-211ENST00000563510 ZBTB22O15209 634 aa18.27■□□□□ 0.52
FANCA-211ENST00000563510 KIF21BO75037 1637 aa18.27■□□□□ 0.51
FANCA-211ENST00000563510 FAM9AQ8IZU1 332 aaPredicted RBP18.26■□□□□ 0.51
FANCA-211ENST00000563510 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
FANCA-211ENST00000563510 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
FANCA-211ENST00000563510 KCNH8Q96L42 1107 aa18.22■□□□□ 0.51
FANCA-211ENST00000563510 RAPGEF6Q8TEU7 1601 aa18.22■□□□□ 0.51
FANCA-211ENST00000563510 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
FANCA-211ENST00000563510 ATP10BO94823 1461 aa18.18■□□□□ 0.5
FANCA-211ENST00000563510 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
FANCA-211ENST00000563510 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
FANCA-211ENST00000563510 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
FANCA-211ENST00000563510 NEO1Q92859 1461 aa18.13■□□□□ 0.49
FANCA-211ENST00000563510 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
FANCA-211ENST00000563510 CFAP74Q9C0B2 1584 aa18.1■□□□□ 0.49
FANCA-211ENST00000563510 P3H3Q8IVL6 736 aa18.1■□□□□ 0.49
FANCA-211ENST00000563510 EEA1Q15075 1411 aa18.09■□□□□ 0.49
FANCA-211ENST00000563510 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
FANCA-211ENST00000563510 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.49
FANCA-211ENST00000563510 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.48
FANCA-211ENST00000563510 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
FANCA-211ENST00000563510 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
FANCA-211ENST00000563510 ARHGEF40Q8TER5 1519 aa18.04■□□□□ 0.48
FANCA-211ENST00000563510 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
FANCA-211ENST00000563510 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
FANCA-211ENST00000563510 PTPRMP28827 1452 aa18.02■□□□□ 0.48
FANCA-211ENST00000563510 MADDQ8WXG6 1647 aa18.02■□□□□ 0.48
FANCA-211ENST00000563510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
FANCA-211ENST00000563510 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
FANCA-211ENST00000563510 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
FANCA-211ENST00000563510 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
FANCA-211ENST00000563510 RIMS1Q86UR5 1692 aaKnown RBP17.98■□□□□ 0.47
FANCA-211ENST00000563510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
FANCA-211ENST00000563510 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms