RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
SNX29-202ENST00000563308 GRIN2AQ12879 1464 aa18.39■□□□□ 0.54
SNX29-202ENST00000563308 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
SNX29-202ENST00000563308 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
SNX29-202ENST00000563308 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
SNX29-202ENST00000563308 NUP160Q12769 1436 aa18.32■□□□□ 0.52
SNX29-202ENST00000563308 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
SNX29-202ENST00000563308 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
SNX29-202ENST00000563308 CUX1P39880 1505 aa18.23■□□□□ 0.51
SNX29-202ENST00000563308 ADCY10Q96PN6 1610 aa18.22■□□□□ 0.51
SNX29-202ENST00000563308 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
SNX29-202ENST00000563308 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
SNX29-202ENST00000563308 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
SNX29-202ENST00000563308 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
SNX29-202ENST00000563308 SPATA31D1Q6ZQQ2 1576 aa18.15■□□□□ 0.5
SNX29-202ENST00000563308 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
SNX29-202ENST00000563308 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
SNX29-202ENST00000563308 PPRC1Q5VV67 1664 aaKnown RBP18.09■□□□□ 0.49
SNX29-202ENST00000563308 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
SNX29-202ENST00000563308 GLI2P10070 1586 aa18.07■□□□□ 0.48
SNX29-202ENST00000563308 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
SNX29-202ENST00000563308 ASXL2Q76L83 1435 aa18.02■□□□□ 0.48
SNX29-202ENST00000563308 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
SNX29-202ENST00000563308 PCF11O94913 1555 aaKnown RBP17.98■□□□□ 0.47
SNX29-202ENST00000563308 PTPRMP28827 1452 aa17.96■□□□□ 0.47
SNX29-202ENST00000563308 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
SNX29-202ENST00000563308 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
SNX29-202ENST00000563308 ABCC2Q92887 1545 aa17.94■□□□□ 0.46
SNX29-202ENST00000563308 PTPRGP23470 1445 aa17.94■□□□□ 0.46
SNX29-202ENST00000563308 BIVM-ERCC5R4GMW8 1640 aa17.94■□□□□ 0.46
SNX29-202ENST00000563308 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
SNX29-202ENST00000563308 MAP3K4Q9Y6R4 1608 aa17.91■□□□□ 0.46
SNX29-202ENST00000563308 KIF21BO75037 1637 aa17.9■□□□□ 0.46
SNX29-202ENST00000563308 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
SNX29-202ENST00000563308 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
SNX29-202ENST00000563308 CUL7Q14999 1698 aa17.86■□□□□ 0.45
SNX29-202ENST00000563308 HSPA2P54652 639 aa17.85■□□□□ 0.45
SNX29-202ENST00000563308 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
SNX29-202ENST00000563308 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
SNX29-202ENST00000563308 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
SNX29-202ENST00000563308 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
SNX29-202ENST00000563308 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
SNX29-202ENST00000563308 UHRF1BP1LA0JNW5 1464 aa17.74■□□□□ 0.43
SNX29-202ENST00000563308 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
SNX29-202ENST00000563308 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
SNX29-202ENST00000563308 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
SNX29-202ENST00000563308 MADDQ8WXG6 1647 aa17.69■□□□□ 0.42
SNX29-202ENST00000563308 MAGI3Q5TCQ9 1506 aa17.68■□□□□ 0.42
SNX29-202ENST00000563308 BCORL1Q5H9F3 1711 aa17.66■□□□□ 0.42
SNX29-202ENST00000563308 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
SNX29-202ENST00000563308 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.42
SNX29-202ENST00000563308 WDR7Q9Y4E6 1490 aa17.64■□□□□ 0.41
SNX29-202ENST00000563308 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
SNX29-202ENST00000563308 ZCCHC11Q5TAX3 1644 aaKnown RBP17.64■□□□□ 0.41
SNX29-202ENST00000563308 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.41
SNX29-202ENST00000563308 IGF1RP08069 1367 aa17.64■□□□□ 0.41
SNX29-202ENST00000563308 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
SNX29-202ENST00000563308 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
SNX29-202ENST00000563308 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
SNX29-202ENST00000563308 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
SNX29-202ENST00000563308 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
SNX29-202ENST00000563308 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
SNX29-202ENST00000563308 IQSEC2Q5JU85 1478 aa17.5■□□□□ 0.39
SNX29-202ENST00000563308 RAPGEF3O95398 923 aa17.5■□□□□ 0.39
SNX29-202ENST00000563308 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
SNX29-202ENST00000563308 UBAP1LF5GYI3 381 aa17.47■□□□□ 0.39
SNX29-202ENST00000563308 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
SNX29-202ENST00000563308 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
SNX29-202ENST00000563308 FANCAO15360 1455 aa17.41■□□□□ 0.38
SNX29-202ENST00000563308 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
SNX29-202ENST00000563308 PTPRTO14522 1441 aa17.4■□□□□ 0.38
SNX29-202ENST00000563308 MLECQ14165 292 aa17.4■□□□□ 0.38
SNX29-202ENST00000563308 STRCQ7RTU9 1775 aa17.38■□□□□ 0.37
SNX29-202ENST00000563308 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
SNX29-202ENST00000563308 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
SNX29-202ENST00000563308 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
SNX29-202ENST00000563308 FER1L4A9Z1Z3 1794 aa17.34■□□□□ 0.37
SNX29-202ENST00000563308 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
SNX29-202ENST00000563308 LTBP4Q8N2S1 1624 aa17.33■□□□□ 0.37
SNX29-202ENST00000563308 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.37
SNX29-202ENST00000563308 NEO1Q92859 1461 aa17.33■□□□□ 0.37
SNX29-202ENST00000563308 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
SNX29-202ENST00000563308 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
SNX29-202ENST00000563308 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
SNX29-202ENST00000563308 KIAA0556O60303 1618 aa17.27■□□□□ 0.36
SNX29-202ENST00000563308 HSPA1LP34931 641 aa17.26■□□□□ 0.35
SNX29-202ENST00000563308 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
SNX29-202ENST00000563308 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
SNX29-202ENST00000563308 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
SNX29-202ENST00000563308 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
SNX29-202ENST00000563308 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
SNX29-202ENST00000563308 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
SNX29-202ENST00000563308 ABCA9Q8IUA7 1624 aa17.22■□□□□ 0.35
SNX29-202ENST00000563308 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
SNX29-202ENST00000563308 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
SNX29-202ENST00000563308 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
SNX29-202ENST00000563308 ZFYVE16Q7Z3T8 1539 aa17.19■□□□□ 0.34
SNX29-202ENST00000563308 TOM1O60784 492 aa17.18■□□□□ 0.34
SNX29-202ENST00000563308 ABCA8O94911 1581 aa17.16■□□□□ 0.34
SNX29-202ENST00000563308 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms