RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ERCC6L2Q5T890 1561 aa14.42□□□□□ -0.1
UBR1-204ENST00000563239 RAPGEF2Q9Y4G8 1499 aa14.41□□□□□ -0.1
UBR1-204ENST00000563239 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
UBR1-204ENST00000563239 KIAA0586Q9BVV6 1533 aa14.4□□□□□ -0.1
UBR1-204ENST00000563239 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
UBR1-204ENST00000563239 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
UBR1-204ENST00000563239 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
UBR1-204ENST00000563239 EEA1Q15075 1411 aa14.35□□□□□ -0.11
UBR1-204ENST00000563239 PRG4Q92954 1404 aaPredicted RBP14.35□□□□□ -0.11
UBR1-204ENST00000563239 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
UBR1-204ENST00000563239 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
UBR1-204ENST00000563239 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
UBR1-204ENST00000563239 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
UBR1-204ENST00000563239 UGGT2Q9NYU1 1516 aa14.25□□□□□ -0.13
UBR1-204ENST00000563239 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
UBR1-204ENST00000563239 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
UBR1-204ENST00000563239 KIF21BO75037 1637 aa14.23□□□□□ -0.13
UBR1-204ENST00000563239 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
UBR1-204ENST00000563239 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
UBR1-204ENST00000563239 KIAA0556O60303 1618 aa14.18□□□□□ -0.14
UBR1-204ENST00000563239 PTPRGP23470 1445 aa14.17□□□□□ -0.14
UBR1-204ENST00000563239 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
UBR1-204ENST00000563239 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
UBR1-204ENST00000563239 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
UBR1-204ENST00000563239 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
UBR1-204ENST00000563239 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
UBR1-204ENST00000563239 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
UBR1-204ENST00000563239 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
UBR1-204ENST00000563239 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
UBR1-204ENST00000563239 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
UBR1-204ENST00000563239 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
UBR1-204ENST00000563239 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
UBR1-204ENST00000563239 PLB1Q6P1J6 1458 aa14.06□□□□□ -0.16
UBR1-204ENST00000563239 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
UBR1-204ENST00000563239 ABCA8O94911 1581 aa14.05□□□□□ -0.16
UBR1-204ENST00000563239 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
UBR1-204ENST00000563239 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBR1-204ENST00000563239 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.16
UBR1-204ENST00000563239 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
UBR1-204ENST00000563239 EFCAB5A4FU69 1503 aa14.01□□□□□ -0.17
UBR1-204ENST00000563239 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
UBR1-204ENST00000563239 ABCC10Q5T3U5 1492 aa13.98□□□□□ -0.17
UBR1-204ENST00000563239 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
UBR1-204ENST00000563239 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
UBR1-204ENST00000563239 KIF13AQ9H1H9 1805 aa13.97□□□□□ -0.17
UBR1-204ENST00000563239 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
UBR1-204ENST00000563239 ATP10BO94823 1461 aa13.94□□□□□ -0.18
UBR1-204ENST00000563239 RAPGEF6Q8TEU7 1601 aa13.94□□□□□ -0.18
UBR1-204ENST00000563239 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
UBR1-204ENST00000563239 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
UBR1-204ENST00000563239 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
UBR1-204ENST00000563239 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
UBR1-204ENST00000563239 EPRSP07814 1512 aaKnown RBP13.89□□□□□ -0.19
UBR1-204ENST00000563239 CLIP1P30622 1438 aa13.89□□□□□ -0.19
UBR1-204ENST00000563239 GLI2P10070 1586 aa13.88□□□□□ -0.19
UBR1-204ENST00000563239 WDR7Q9Y4E6 1490 aa13.88□□□□□ -0.19
UBR1-204ENST00000563239 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
UBR1-204ENST00000563239 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
UBR1-204ENST00000563239 CDK13Q14004 1512 aaKnown RBP13.82□□□□□ -0.2
UBR1-204ENST00000563239 KCNH8Q96L42 1107 aa13.82□□□□□ -0.2
UBR1-204ENST00000563239 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
UBR1-204ENST00000563239 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
UBR1-204ENST00000563239 CASKIN1Q8WXD9 1431 aa13.81□□□□□ -0.2
UBR1-204ENST00000563239 HECW1Q76N89 1606 aa13.8□□□□□ -0.2
UBR1-204ENST00000563239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
UBR1-204ENST00000563239 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
UBR1-204ENST00000563239 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
UBR1-204ENST00000563239 LRRIQ1Q96JM4 1722 aa13.79□□□□□ -0.2
UBR1-204ENST00000563239 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
UBR1-204ENST00000563239 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
UBR1-204ENST00000563239 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
UBR1-204ENST00000563239 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
UBR1-204ENST00000563239 ABCA9Q8IUA7 1624 aa13.75□□□□□ -0.21
UBR1-204ENST00000563239 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
UBR1-204ENST00000563239 CD109Q6YHK3 1445 aa13.75□□□□□ -0.21
UBR1-204ENST00000563239 MAGI3Q5TCQ9 1506 aa13.74□□□□□ -0.21
UBR1-204ENST00000563239 COL17A1Q9UMD9 1497 aaPredicted RBP13.72□□□□□ -0.21
UBR1-204ENST00000563239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBR1-204ENST00000563239 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.21
UBR1-204ENST00000563239 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
UBR1-204ENST00000563239 TEX14Q8IWB6 1497 aa13.71□□□□□ -0.21
UBR1-204ENST00000563239 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
UBR1-204ENST00000563239 KDM6BO15054 1643 aa13.69□□□□□ -0.22
UBR1-204ENST00000563239 TTC37Q6PGP7 1564 aa13.69□□□□□ -0.22
UBR1-204ENST00000563239 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
UBR1-204ENST00000563239 KIF14Q15058 1648 aa13.68□□□□□ -0.22
UBR1-204ENST00000563239 VPS8Q8N3P4 1428 aa13.66□□□□□ -0.22
UBR1-204ENST00000563239 NEO1Q92859 1461 aa13.63□□□□□ -0.23
UBR1-204ENST00000563239 ARAP3Q8WWN8 1544 aa13.63□□□□□ -0.23
UBR1-204ENST00000563239 PLCH2O75038 1416 aa13.63□□□□□ -0.23
UBR1-204ENST00000563239 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
UBR1-204ENST00000563239 FANCAO15360 1455 aa13.6□□□□□ -0.23
UBR1-204ENST00000563239 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
UBR1-204ENST00000563239 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
UBR1-204ENST00000563239 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
UBR1-204ENST00000563239 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
UBR1-204ENST00000563239 RAPGEF3O95398 923 aa13.56□□□□□ -0.24
UBR1-204ENST00000563239 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
UBR1-204ENST00000563239 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
UBR1-204ENST00000563239 CDC42BPBQ9Y5S2 1711 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms