RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
CKLF-208ENST00000563092 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
CKLF-208ENST00000563092 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
CKLF-208ENST00000563092 ADAMTS12P58397 1594 aa15.33■□□□□ 0.05
CKLF-208ENST00000563092 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
CKLF-208ENST00000563092 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
CKLF-208ENST00000563092 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
CKLF-208ENST00000563092 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
CKLF-208ENST00000563092 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
CKLF-208ENST00000563092 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
CKLF-208ENST00000563092 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
CKLF-208ENST00000563092 ABCC10Q5T3U5 1492 aa15.17■□□□□ 0.02
CKLF-208ENST00000563092 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
CKLF-208ENST00000563092 MAPKBP1O60336 1514 aa15.16■□□□□ 0.02
CKLF-208ENST00000563092 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
CKLF-208ENST00000563092 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
CKLF-208ENST00000563092 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
CKLF-208ENST00000563092 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
CKLF-208ENST00000563092 KDM4FA0A1W2PPD8 638 aa15.04■□□□□ -0
CKLF-208ENST00000563092 KIAA0586Q9BVV6 1533 aa15.03■□□□□ -0
CKLF-208ENST00000563092 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
CKLF-208ENST00000563092 NPM1P06748 294 aaKnown RBP eCLIP15.03■□□□□ -0
CKLF-208ENST00000563092 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
CKLF-208ENST00000563092 KDM6BO15054 1643 aa15□□□□□ -0.01
CKLF-208ENST00000563092 IGF1RP08069 1367 aa14.99□□□□□ -0.01
CKLF-208ENST00000563092 CUL7Q14999 1698 aa14.93□□□□□ -0.02
CKLF-208ENST00000563092 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
CKLF-208ENST00000563092 PTPRGP23470 1445 aa14.92□□□□□ -0.02
CKLF-208ENST00000563092 GLI2P10070 1586 aa14.91□□□□□ -0.02
CKLF-208ENST00000563092 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
CKLF-208ENST00000563092 PPRC1Q5VV67 1664 aaKnown RBP14.89□□□□□ -0.03
CKLF-208ENST00000563092 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
CKLF-208ENST00000563092 TSPOAP1O95153 1857 aa14.88□□□□□ -0.03
CKLF-208ENST00000563092 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
CKLF-208ENST00000563092 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
CKLF-208ENST00000563092 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
CKLF-208ENST00000563092 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
CKLF-208ENST00000563092 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
CKLF-208ENST00000563092 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
CKLF-208ENST00000563092 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
CKLF-208ENST00000563092 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
CKLF-208ENST00000563092 COL17A1Q9UMD9 1497 aaPredicted RBP14.83□□□□□ -0.03
CKLF-208ENST00000563092 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
CKLF-208ENST00000563092 ADGRL1O94910 1474 aa14.82□□□□□ -0.04
CKLF-208ENST00000563092 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
CKLF-208ENST00000563092 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
CKLF-208ENST00000563092 DISP1Q96F81 1524 aa14.81□□□□□ -0.04
CKLF-208ENST00000563092 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
CKLF-208ENST00000563092 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
CKLF-208ENST00000563092 MAP3K4Q9Y6R4 1608 aa14.79□□□□□ -0.04
CKLF-208ENST00000563092 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
CKLF-208ENST00000563092 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
CKLF-208ENST00000563092 TEX14Q8IWB6 1497 aa14.75□□□□□ -0.05
CKLF-208ENST00000563092 HECW2Q9P2P5 1572 aa14.72□□□□□ -0.05
CKLF-208ENST00000563092 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
CKLF-208ENST00000563092 ZCCHC11Q5TAX3 1644 aaKnown RBP14.71□□□□□ -0.05
CKLF-208ENST00000563092 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
CKLF-208ENST00000563092 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
CKLF-208ENST00000563092 WDR7Q9Y4E6 1490 aa14.68□□□□□ -0.06
CKLF-208ENST00000563092 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
CKLF-208ENST00000563092 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
CKLF-208ENST00000563092 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
CKLF-208ENST00000563092 ABCA8O94911 1581 aa14.61□□□□□ -0.07
CKLF-208ENST00000563092 CD109Q6YHK3 1445 aa14.6□□□□□ -0.07
CKLF-208ENST00000563092 CFAP43Q8NDM7 1665 aa14.6□□□□□ -0.07
CKLF-208ENST00000563092 ARAP3Q8WWN8 1544 aa14.56□□□□□ -0.08
CKLF-208ENST00000563092 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
CKLF-208ENST00000563092 CTTNBP2Q8WZ74 1663 aa14.52□□□□□ -0.08
CKLF-208ENST00000563092 KIF21BO75037 1637 aa14.51□□□□□ -0.09
CKLF-208ENST00000563092 PRXQ9BXM0 1461 aa14.5□□□□□ -0.09
CKLF-208ENST00000563092 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
CKLF-208ENST00000563092 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
CKLF-208ENST00000563092 KCNH8Q96L42 1107 aa14.49□□□□□ -0.09
CKLF-208ENST00000563092 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
CKLF-208ENST00000563092 ATP10BO94823 1461 aa14.47□□□□□ -0.09
CKLF-208ENST00000563092 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
CKLF-208ENST00000563092 PTPRMP28827 1452 aa14.46□□□□□ -0.09
CKLF-208ENST00000563092 NEO1Q92859 1461 aa14.43□□□□□ -0.1
CKLF-208ENST00000563092 FRMPD1Q5SYB0 1578 aa14.41□□□□□ -0.1
CKLF-208ENST00000563092 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
CKLF-208ENST00000563092 RAPGEF3O95398 923 aa14.39□□□□□ -0.11
CKLF-208ENST00000563092 LMTK3Q96Q04 1460 aa14.38□□□□□ -0.11
CKLF-208ENST00000563092 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
CKLF-208ENST00000563092 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
CKLF-208ENST00000563092 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
CKLF-208ENST00000563092 SAMD9Q5K651 1589 aa14.38□□□□□ -0.11
CKLF-208ENST00000563092 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
CKLF-208ENST00000563092 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.11
CKLF-208ENST00000563092 ARHGEF40Q8TER5 1519 aa14.33□□□□□ -0.12
CKLF-208ENST00000563092 NUP153P49790 1475 aaKnown RBP14.32□□□□□ -0.12
CKLF-208ENST00000563092 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
CKLF-208ENST00000563092 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
CKLF-208ENST00000563092 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
CKLF-208ENST00000563092 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
CKLF-208ENST00000563092 RICTORQ6R327 1708 aa14.29□□□□□ -0.12
CKLF-208ENST00000563092 ZMYM4Q5VZL5 1548 aa14.29□□□□□ -0.12
CKLF-208ENST00000563092 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
CKLF-208ENST00000563092 AKNAQ7Z591 1439 aa14.27□□□□□ -0.12
CKLF-208ENST00000563092 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
CKLF-208ENST00000563092 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms