RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SIN3A-204ENST00000562776 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
SIN3A-204ENST00000562776 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
SIN3A-204ENST00000562776 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
SIN3A-204ENST00000562776 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
SIN3A-204ENST00000562776 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
SIN3A-204ENST00000562776 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
SIN3A-204ENST00000562776 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
SIN3A-204ENST00000562776 KIF13AQ9H1H9 1805 aa18.59■□□□□ 0.57
SIN3A-204ENST00000562776 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
SIN3A-204ENST00000562776 FAM69CQ0P6D2 419 aa18.56■□□□□ 0.56
SIN3A-204ENST00000562776 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
SIN3A-204ENST00000562776 PTPRGP23470 1445 aa18.54■□□□□ 0.56
SIN3A-204ENST00000562776 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
SIN3A-204ENST00000562776 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
SIN3A-204ENST00000562776 DIP2BQ9P265 1576 aa18.49■□□□□ 0.55
SIN3A-204ENST00000562776 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
SIN3A-204ENST00000562776 PRXQ9BXM0 1461 aa18.46■□□□□ 0.54
SIN3A-204ENST00000562776 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
SIN3A-204ENST00000562776 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
SIN3A-204ENST00000562776 DISP1Q96F81 1524 aa18.44■□□□□ 0.54
SIN3A-204ENST00000562776 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
SIN3A-204ENST00000562776 EEA1Q15075 1411 aa18.41■□□□□ 0.54
SIN3A-204ENST00000562776 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
SIN3A-204ENST00000562776 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
SIN3A-204ENST00000562776 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
SIN3A-204ENST00000562776 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
SIN3A-204ENST00000562776 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
SIN3A-204ENST00000562776 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
SIN3A-204ENST00000562776 GLI2P10070 1586 aa18.35■□□□□ 0.53
SIN3A-204ENST00000562776 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
SIN3A-204ENST00000562776 KDM5BQ9UGL1 1544 aa18.34■□□□□ 0.53
SIN3A-204ENST00000562776 KDM6BO15054 1643 aa18.31■□□□□ 0.52
SIN3A-204ENST00000562776 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
SIN3A-204ENST00000562776 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
SIN3A-204ENST00000562776 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
SIN3A-204ENST00000562776 FAM9AQ8IZU1 332 aaPredicted RBP18.26■□□□□ 0.51
SIN3A-204ENST00000562776 EPRSP07814 1512 aaKnown RBP18.26■□□□□ 0.51
SIN3A-204ENST00000562776 KIF21BO75037 1637 aa18.23■□□□□ 0.51
SIN3A-204ENST00000562776 PPRC1Q5VV67 1664 aaKnown RBP18.23■□□□□ 0.51
SIN3A-204ENST00000562776 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
SIN3A-204ENST00000562776 ZCCHC11Q5TAX3 1644 aaKnown RBP18.22■□□□□ 0.51
SIN3A-204ENST00000562776 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
SIN3A-204ENST00000562776 ABCA8O94911 1581 aa18.18■□□□□ 0.5
SIN3A-204ENST00000562776 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
SIN3A-204ENST00000562776 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
SIN3A-204ENST00000562776 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
SIN3A-204ENST00000562776 SAMD9Q5K651 1589 aa18.15■□□□□ 0.5
SIN3A-204ENST00000562776 MAGI3Q5TCQ9 1506 aa18.1■□□□□ 0.49
SIN3A-204ENST00000562776 CD109Q6YHK3 1445 aa18.08■□□□□ 0.49
SIN3A-204ENST00000562776 P3H3Q8IVL6 736 aa18.07■□□□□ 0.48
SIN3A-204ENST00000562776 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
SIN3A-204ENST00000562776 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
SIN3A-204ENST00000562776 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
SIN3A-204ENST00000562776 ATP10BO94823 1461 aa18.05■□□□□ 0.48
SIN3A-204ENST00000562776 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
SIN3A-204ENST00000562776 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
SIN3A-204ENST00000562776 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
SIN3A-204ENST00000562776 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
SIN3A-204ENST00000562776 ADGRL1O94910 1474 aa18■□□□□ 0.47
SIN3A-204ENST00000562776 RAPGEF6Q8TEU7 1601 aa17.99■□□□□ 0.47
SIN3A-204ENST00000562776 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
SIN3A-204ENST00000562776 ARAP3Q8WWN8 1544 aa17.97■□□□□ 0.47
SIN3A-204ENST00000562776 ABCA9Q8IUA7 1624 aa17.94■□□□□ 0.46
SIN3A-204ENST00000562776 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
SIN3A-204ENST00000562776 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
SIN3A-204ENST00000562776 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
SIN3A-204ENST00000562776 NEO1Q92859 1461 aa17.88■□□□□ 0.45
SIN3A-204ENST00000562776 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
SIN3A-204ENST00000562776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
SIN3A-204ENST00000562776 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
SIN3A-204ENST00000562776 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
SIN3A-204ENST00000562776 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
SIN3A-204ENST00000562776 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
SIN3A-204ENST00000562776 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
SIN3A-204ENST00000562776 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
SIN3A-204ENST00000562776 CLIP1P30622 1438 aa17.77■□□□□ 0.44
SIN3A-204ENST00000562776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.74■□□□□ 0.438e-8■■■□□ 18.8
SIN3A-204ENST00000562776 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
SIN3A-204ENST00000562776 AKNAQ7Z591 1439 aa17.73■□□□□ 0.43
SIN3A-204ENST00000562776 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
SIN3A-204ENST00000562776 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
SIN3A-204ENST00000562776 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
SIN3A-204ENST00000562776 FANCAO15360 1455 aa17.72■□□□□ 0.43
SIN3A-204ENST00000562776 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-204ENST00000562776 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
SIN3A-204ENST00000562776 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.42
SIN3A-204ENST00000562776 PLCH2O75038 1416 aa17.69■□□□□ 0.42
SIN3A-204ENST00000562776 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
SIN3A-204ENST00000562776 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
SIN3A-204ENST00000562776 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
SIN3A-204ENST00000562776 PTPRMP28827 1452 aa17.68■□□□□ 0.42
SIN3A-204ENST00000562776 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
SIN3A-204ENST00000562776 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
SIN3A-204ENST00000562776 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
SIN3A-204ENST00000562776 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
SIN3A-204ENST00000562776 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
SIN3A-204ENST00000562776 MAGI2Q86UL8 1455 aa17.65■□□□□ 0.42
SIN3A-204ENST00000562776 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
SIN3A-204ENST00000562776 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms