RNA–Protein interactions for RNA: ENST00000562431.1

LPCAT4-203, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 341 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-203ENST00000562431 KIF13AQ9H1H9 1805 aa19.61■□□□□ 0.73
LPCAT4-203ENST00000562431 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
LPCAT4-203ENST00000562431 CUL7Q14999 1698 aa19.57■□□□□ 0.72
LPCAT4-203ENST00000562431 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
LPCAT4-203ENST00000562431 EEA1Q15075 1411 aa19.57■□□□□ 0.72
LPCAT4-203ENST00000562431 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
LPCAT4-203ENST00000562431 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
LPCAT4-203ENST00000562431 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
LPCAT4-203ENST00000562431 RAPGEF2Q9Y4G8 1499 aa19.47■□□□□ 0.71
LPCAT4-203ENST00000562431 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
LPCAT4-203ENST00000562431 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
LPCAT4-203ENST00000562431 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
LPCAT4-203ENST00000562431 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
LPCAT4-203ENST00000562431 ADCY10Q96PN6 1610 aa19.4■□□□□ 0.7
LPCAT4-203ENST00000562431 JPH4Q96JJ6 628 aa19.38■□□□□ 0.69
LPCAT4-203ENST00000562431 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
LPCAT4-203ENST00000562431 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
LPCAT4-203ENST00000562431 KIF21BO75037 1637 aa19.32■□□□□ 0.68
LPCAT4-203ENST00000562431 FAM69CQ0P6D2 419 aa19.27■□□□□ 0.68
LPCAT4-203ENST00000562431 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
LPCAT4-203ENST00000562431 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
LPCAT4-203ENST00000562431 KDM6BO15054 1643 aa19.25■□□□□ 0.67
LPCAT4-203ENST00000562431 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
LPCAT4-203ENST00000562431 CTTNBP2Q8WZ74 1663 aa19.22■□□□□ 0.67
LPCAT4-203ENST00000562431 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
LPCAT4-203ENST00000562431 KDM4FA0A1W2PPD8 638 aa19.17■□□□□ 0.66
LPCAT4-203ENST00000562431 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
LPCAT4-203ENST00000562431 PPRC1Q5VV67 1664 aaKnown RBP19.16■□□□□ 0.66
LPCAT4-203ENST00000562431 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
LPCAT4-203ENST00000562431 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
LPCAT4-203ENST00000562431 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
LPCAT4-203ENST00000562431 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
LPCAT4-203ENST00000562431 PTPRGP23470 1445 aa19.09■□□□□ 0.65
LPCAT4-203ENST00000562431 GLI2P10070 1586 aa19.09■□□□□ 0.65
LPCAT4-203ENST00000562431 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
LPCAT4-203ENST00000562431 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
LPCAT4-203ENST00000562431 UHRF1BP1LA0JNW5 1464 aa19.06■□□□□ 0.64
LPCAT4-203ENST00000562431 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
LPCAT4-203ENST00000562431 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
LPCAT4-203ENST00000562431 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
LPCAT4-203ENST00000562431 KIAA0556O60303 1618 aa19.05■□□□□ 0.64
LPCAT4-203ENST00000562431 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
LPCAT4-203ENST00000562431 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
LPCAT4-203ENST00000562431 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
LPCAT4-203ENST00000562431 SAMD9Q5K651 1589 aa18.99■□□□□ 0.63
LPCAT4-203ENST00000562431 COL17A1Q9UMD9 1497 aaPredicted RBP18.99■□□□□ 0.63
LPCAT4-203ENST00000562431 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
LPCAT4-203ENST00000562431 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
LPCAT4-203ENST00000562431 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
LPCAT4-203ENST00000562431 EPRSP07814 1512 aaKnown RBP18.97■□□□□ 0.63
LPCAT4-203ENST00000562431 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
LPCAT4-203ENST00000562431 FHOD3Q2V2M9 1422 aa18.95■□□□□ 0.62
LPCAT4-203ENST00000562431 ZCCHC11Q5TAX3 1644 aaKnown RBP18.95■□□□□ 0.62
LPCAT4-203ENST00000562431 CLIP1P30622 1438 aa18.93■□□□□ 0.62
LPCAT4-203ENST00000562431 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
LPCAT4-203ENST00000562431 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
LPCAT4-203ENST00000562431 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
LPCAT4-203ENST00000562431 ILDR1Q86SU0 546 aaPredicted RBP18.84■□□□□ 0.61
LPCAT4-203ENST00000562431 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
LPCAT4-203ENST00000562431 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
LPCAT4-203ENST00000562431 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
LPCAT4-203ENST00000562431 ABCA8O94911 1581 aa18.82■□□□□ 0.6
LPCAT4-203ENST00000562431 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
LPCAT4-203ENST00000562431 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
LPCAT4-203ENST00000562431 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
LPCAT4-203ENST00000562431 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
LPCAT4-203ENST00000562431 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
LPCAT4-203ENST00000562431 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
LPCAT4-203ENST00000562431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
LPCAT4-203ENST00000562431 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
LPCAT4-203ENST00000562431 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
LPCAT4-203ENST00000562431 HECW1Q76N89 1606 aa18.7■□□□□ 0.58
LPCAT4-203ENST00000562431 PCF11O94913 1555 aaKnown RBP18.69■□□□□ 0.58
LPCAT4-203ENST00000562431 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
LPCAT4-203ENST00000562431 ATP10BO94823 1461 aa18.68■□□□□ 0.58
LPCAT4-203ENST00000562431 FYCO1Q9BQS8 1478 aa18.66■□□□□ 0.58
LPCAT4-203ENST00000562431 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
LPCAT4-203ENST00000562431 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
LPCAT4-203ENST00000562431 ARAP3Q8WWN8 1544 aa18.63■□□□□ 0.57
LPCAT4-203ENST00000562431 CCDC18Q5T9S5 1454 aa18.61■□□□□ 0.57
LPCAT4-203ENST00000562431 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
LPCAT4-203ENST00000562431 PLEKHD1A6NEE1 506 aa18.59■□□□□ 0.57
LPCAT4-203ENST00000562431 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
LPCAT4-203ENST00000562431 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
LPCAT4-203ENST00000562431 KCNH8Q96L42 1107 aa18.57■□□□□ 0.56
LPCAT4-203ENST00000562431 FRMPD1Q5SYB0 1578 aa18.55■□□□□ 0.56
LPCAT4-203ENST00000562431 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
LPCAT4-203ENST00000562431 APLP2Q06481 763 aa18.51■□□□□ 0.55
LPCAT4-203ENST00000562431 PTPRMP28827 1452 aa18.5■□□□□ 0.55
LPCAT4-203ENST00000562431 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
LPCAT4-203ENST00000562431 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
LPCAT4-203ENST00000562431 NEO1Q92859 1461 aa18.47■□□□□ 0.55
LPCAT4-203ENST00000562431 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
LPCAT4-203ENST00000562431 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
LPCAT4-203ENST00000562431 TIAM1Q13009 1591 aa18.46■□□□□ 0.55
LPCAT4-203ENST00000562431 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
LPCAT4-203ENST00000562431 KIF14Q15058 1648 aa18.43■□□□□ 0.54
LPCAT4-203ENST00000562431 ARHGEF40Q8TER5 1519 aa18.43■□□□□ 0.54
LPCAT4-203ENST00000562431 RICTORQ6R327 1708 aa18.42■□□□□ 0.54
LPCAT4-203ENST00000562431 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms