RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
LPCAT4-202ENST00000562404 PRG4Q92954 1404 aaPredicted RBP19.07■□□□□ 0.64
LPCAT4-202ENST00000562404 KIAA0586Q9BVV6 1533 aa19.03■□□□□ 0.64
LPCAT4-202ENST00000562404 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
LPCAT4-202ENST00000562404 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
LPCAT4-202ENST00000562404 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
LPCAT4-202ENST00000562404 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
LPCAT4-202ENST00000562404 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
LPCAT4-202ENST00000562404 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
LPCAT4-202ENST00000562404 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
LPCAT4-202ENST00000562404 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
LPCAT4-202ENST00000562404 UGGT2Q9NYU1 1516 aa18.81■□□□□ 0.6
LPCAT4-202ENST00000562404 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
LPCAT4-202ENST00000562404 PTPRGP23470 1445 aa18.78■□□□□ 0.6
LPCAT4-202ENST00000562404 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
LPCAT4-202ENST00000562404 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
LPCAT4-202ENST00000562404 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
LPCAT4-202ENST00000562404 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
LPCAT4-202ENST00000562404 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
LPCAT4-202ENST00000562404 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
LPCAT4-202ENST00000562404 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
LPCAT4-202ENST00000562404 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
LPCAT4-202ENST00000562404 NPM1P06748 294 aaKnown RBP eCLIP18.68■□□□□ 0.58
LPCAT4-202ENST00000562404 EEA1Q15075 1411 aa18.67■□□□□ 0.58
LPCAT4-202ENST00000562404 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
LPCAT4-202ENST00000562404 ABCC2Q92887 1545 aa18.67■□□□□ 0.58
LPCAT4-202ENST00000562404 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
LPCAT4-202ENST00000562404 UHRF1BP1LA0JNW5 1464 aa18.66■□□□□ 0.58
LPCAT4-202ENST00000562404 FAM69CQ0P6D2 419 aa18.62■□□□□ 0.57
LPCAT4-202ENST00000562404 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
LPCAT4-202ENST00000562404 PLB1Q6P1J6 1458 aa18.61■□□□□ 0.57
LPCAT4-202ENST00000562404 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
LPCAT4-202ENST00000562404 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
LPCAT4-202ENST00000562404 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
LPCAT4-202ENST00000562404 KIF21BO75037 1637 aa18.59■□□□□ 0.57
LPCAT4-202ENST00000562404 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
LPCAT4-202ENST00000562404 ABCA8O94911 1581 aa18.58■□□□□ 0.56
LPCAT4-202ENST00000562404 SAMD9Q5K651 1589 aa18.58■□□□□ 0.56
LPCAT4-202ENST00000562404 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
LPCAT4-202ENST00000562404 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
LPCAT4-202ENST00000562404 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
LPCAT4-202ENST00000562404 GLI2P10070 1586 aa18.5■□□□□ 0.55
LPCAT4-202ENST00000562404 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
LPCAT4-202ENST00000562404 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
LPCAT4-202ENST00000562404 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
LPCAT4-202ENST00000562404 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
LPCAT4-202ENST00000562404 WDR7Q9Y4E6 1490 aa18.44■□□□□ 0.54
LPCAT4-202ENST00000562404 RAPGEF6Q8TEU7 1601 aa18.43■□□□□ 0.54
LPCAT4-202ENST00000562404 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
LPCAT4-202ENST00000562404 ATP10BO94823 1461 aa18.41■□□□□ 0.54
LPCAT4-202ENST00000562404 KDM6BO15054 1643 aa18.41■□□□□ 0.54
LPCAT4-202ENST00000562404 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.53
LPCAT4-202ENST00000562404 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
LPCAT4-202ENST00000562404 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
LPCAT4-202ENST00000562404 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
LPCAT4-202ENST00000562404 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
LPCAT4-202ENST00000562404 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.53
LPCAT4-202ENST00000562404 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.53
LPCAT4-202ENST00000562404 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
LPCAT4-202ENST00000562404 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.51
LPCAT4-202ENST00000562404 TEX14Q8IWB6 1497 aa18.26■□□□□ 0.51
LPCAT4-202ENST00000562404 ABCA9Q8IUA7 1624 aa18.26■□□□□ 0.51
LPCAT4-202ENST00000562404 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
LPCAT4-202ENST00000562404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
LPCAT4-202ENST00000562404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
LPCAT4-202ENST00000562404 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
LPCAT4-202ENST00000562404 FMN1Q68DA7 1419 aa18.18■□□□□ 0.5
LPCAT4-202ENST00000562404 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
LPCAT4-202ENST00000562404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.5
LPCAT4-202ENST00000562404 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
LPCAT4-202ENST00000562404 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
LPCAT4-202ENST00000562404 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
LPCAT4-202ENST00000562404 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
LPCAT4-202ENST00000562404 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
LPCAT4-202ENST00000562404 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
LPCAT4-202ENST00000562404 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
LPCAT4-202ENST00000562404 CLIP1P30622 1438 aa18.09■□□□□ 0.49
LPCAT4-202ENST00000562404 KIF14Q15058 1648 aa18.09■□□□□ 0.49
LPCAT4-202ENST00000562404 NEO1Q92859 1461 aa18.07■□□□□ 0.48
LPCAT4-202ENST00000562404 FRMPD1Q5SYB0 1578 aa18.07■□□□□ 0.48
LPCAT4-202ENST00000562404 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
LPCAT4-202ENST00000562404 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
LPCAT4-202ENST00000562404 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
LPCAT4-202ENST00000562404 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
LPCAT4-202ENST00000562404 FANCAO15360 1455 aa18.02■□□□□ 0.48
LPCAT4-202ENST00000562404 ADGRL1O94910 1474 aa18.02■□□□□ 0.48
LPCAT4-202ENST00000562404 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.48
LPCAT4-202ENST00000562404 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
LPCAT4-202ENST00000562404 AKNAQ7Z591 1439 aa18.01■□□□□ 0.47
LPCAT4-202ENST00000562404 FYCO1Q9BQS8 1478 aa18.01■□□□□ 0.47
LPCAT4-202ENST00000562404 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
LPCAT4-202ENST00000562404 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
LPCAT4-202ENST00000562404 PLCH2O75038 1416 aa17.98■□□□□ 0.47
LPCAT4-202ENST00000562404 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
LPCAT4-202ENST00000562404 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
LPCAT4-202ENST00000562404 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
LPCAT4-202ENST00000562404 CDC42BPBQ9Y5S2 1711 aa17.97■□□□□ 0.47
LPCAT4-202ENST00000562404 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
LPCAT4-202ENST00000562404 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
LPCAT4-202ENST00000562404 SIGLEC1Q9BZZ2 1709 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms