RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
SMG1-205ENST00000561947 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
SMG1-205ENST00000561947 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
SMG1-205ENST00000561947 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
SMG1-205ENST00000561947 PCF11O94913 1555 aaKnown RBP14.82□□□□□ -0.04
SMG1-205ENST00000561947 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
SMG1-205ENST00000561947 WDR62O43379 1518 aa14.81□□□□□ -0.04
SMG1-205ENST00000561947 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
SMG1-205ENST00000561947 FHOD3Q2V2M9 1422 aa14.79□□□□□ -0.04
SMG1-205ENST00000561947 SAMD9Q5K651 1589 aa14.77□□□□□ -0.04
SMG1-205ENST00000561947 AQRO60306 1485 aaKnown RBP eCLIP14.77□□□□□ -0.04
SMG1-205ENST00000561947 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.05
SMG1-205ENST00000561947 P3H3Q8IVL6 736 aa14.77□□□□□ -0.05
SMG1-205ENST00000561947 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
SMG1-205ENST00000561947 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
SMG1-205ENST00000561947 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
SMG1-205ENST00000561947 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
SMG1-205ENST00000561947 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
SMG1-205ENST00000561947 FMN1Q68DA7 1419 aa14.73□□□□□ -0.05
SMG1-205ENST00000561947 GRIN2BQ13224 1484 aa14.73□□□□□ -0.05
SMG1-205ENST00000561947 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
SMG1-205ENST00000561947 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
SMG1-205ENST00000561947 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
SMG1-205ENST00000561947 ZNF608Q9ULD9 1512 aaPredicted RBP14.69□□□□□ -0.06
SMG1-205ENST00000561947 IQGAP2Q13576 1575 aa14.67□□□□□ -0.06
SMG1-205ENST00000561947 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
SMG1-205ENST00000561947 ATP1B4Q9UN42 357 aaPredicted RBP14.66□□□□□ -0.06
SMG1-205ENST00000561947 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
SMG1-205ENST00000561947 LRRIQ1Q96JM4 1722 aa14.64□□□□□ -0.07
SMG1-205ENST00000561947 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
SMG1-205ENST00000561947 UGGT2Q9NYU1 1516 aa14.59□□□□□ -0.07
SMG1-205ENST00000561947 CLSPNQ9HAW4 1339 aa14.59□□□□□ -0.07
SMG1-205ENST00000561947 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
SMG1-205ENST00000561947 MAGI1Q96QZ7 1491 aaPredicted RBP14.56□□□□□ -0.08
SMG1-205ENST00000561947 HECW1Q76N89 1606 aa14.56□□□□□ -0.08
SMG1-205ENST00000561947 ITGAEP38570 1179 aa14.56□□□□□ -0.08
SMG1-205ENST00000561947 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
SMG1-205ENST00000561947 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
SMG1-205ENST00000561947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMG1-205ENST00000561947 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
SMG1-205ENST00000561947 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
SMG1-205ENST00000561947 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
SMG1-205ENST00000561947 FAM50AQ14320 339 aaKnown RBP14.53□□□□□ -0.08
SMG1-205ENST00000561947 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
SMG1-205ENST00000561947 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.09
SMG1-205ENST00000561947 RAB3GAP2Q9H2M9 1393 aa14.51□□□□□ -0.09
SMG1-205ENST00000561947 SYNJ2O15056 1496 aa14.51□□□□□ -0.09
SMG1-205ENST00000561947 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
SMG1-205ENST00000561947 NCOA2Q15596 1464 aa14.51□□□□□ -0.09
SMG1-205ENST00000561947 DISP1Q96F81 1524 aa14.5□□□□□ -0.09
SMG1-205ENST00000561947 MAGI3Q5TCQ9 1506 aa14.49□□□□□ -0.09
SMG1-205ENST00000561947 EPRSP07814 1512 aaKnown RBP14.49□□□□□ -0.09
SMG1-205ENST00000561947 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
SMG1-205ENST00000561947 ARHGEF11O15085 1522 aa14.48□□□□□ -0.09
SMG1-205ENST00000561947 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
SMG1-205ENST00000561947 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
SMG1-205ENST00000561947 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
SMG1-205ENST00000561947 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
SMG1-205ENST00000561947 CDK13Q14004 1512 aaKnown RBP14.45□□□□□ -0.1
SMG1-205ENST00000561947 NUP160Q12769 1436 aa14.43□□□□□ -0.1
SMG1-205ENST00000561947 MAPKBP1O60336 1514 aa14.43□□□□□ -0.1
SMG1-205ENST00000561947 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
SMG1-205ENST00000561947 PTPN23Q9H3S7 1636 aa14.42□□□□□ -0.1
SMG1-205ENST00000561947 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
SMG1-205ENST00000561947 TCOF1Q13428 1488 aaKnown RBP14.39□□□□□ -0.11
SMG1-205ENST00000561947 FBLN2P98095 1184 aa14.38□□□□□ -0.11
SMG1-205ENST00000561947 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
SMG1-205ENST00000561947 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
SMG1-205ENST00000561947 CARMIL2Q6F5E8 1435 aa14.35□□□□□ -0.11
SMG1-205ENST00000561947 MIA2Q96PC5 1412 aa14.35□□□□□ -0.11
SMG1-205ENST00000561947 ARID3CA6NKF2 412 aa14.34□□□□□ -0.11
SMG1-205ENST00000561947 JPH4Q96JJ6 628 aa14.33□□□□□ -0.12
SMG1-205ENST00000561947 NAIPQ13075 1403 aa14.32□□□□□ -0.12
SMG1-205ENST00000561947 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
SMG1-205ENST00000561947 GCC2Q8IWJ2 1684 aa14.31□□□□□ -0.12
SMG1-205ENST00000561947 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
SMG1-205ENST00000561947 CHD1O14646 1710 aa14.29□□□□□ -0.12
SMG1-205ENST00000561947 AKNAQ7Z591 1439 aa14.28□□□□□ -0.12
SMG1-205ENST00000561947 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
SMG1-205ENST00000561947 ADCY10Q96PN6 1610 aa14.28□□□□□ -0.12
SMG1-205ENST00000561947 TROQ12816 1431 aaPredicted RBP14.28□□□□□ -0.12
SMG1-205ENST00000561947 ABCA8O94911 1581 aa14.28□□□□□ -0.12
SMG1-205ENST00000561947 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
SMG1-205ENST00000561947 PRG4Q92954 1404 aaPredicted RBP14.25□□□□□ -0.13
SMG1-205ENST00000561947 DNMT1P26358 1616 aaKnown RBP14.24□□□□□ -0.13
SMG1-205ENST00000561947 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
SMG1-205ENST00000561947 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
SMG1-205ENST00000561947 KIF14Q15058 1648 aa14.23□□□□□ -0.13
SMG1-205ENST00000561947 DAPK1P53355 1430 aa14.21□□□□□ -0.13
SMG1-205ENST00000561947 NEUROD1Q13562 356 aa14.21□□□□□ -0.13
SMG1-205ENST00000561947 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
SMG1-205ENST00000561947 CHIC2Q9UKJ5 165 aa14.21□□□□□ -0.13
SMG1-205ENST00000561947 SHROOM2Q13796 1616 aa14.21□□□□□ -0.14
SMG1-205ENST00000561947 KDM6BO15054 1643 aa14.2□□□□□ -0.14
SMG1-205ENST00000561947 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
SMG1-205ENST00000561947 ABCC5O15440 1437 aa14.19□□□□□ -0.14
SMG1-205ENST00000561947 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
SMG1-205ENST00000561947 ATP10BO94823 1461 aa14.19□□□□□ -0.14
SMG1-205ENST00000561947 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
SMG1-205ENST00000561947 PTPRGP23470 1445 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms