RNA–Protein interactions for RNA: ENST00000561816.1

LINC01616-201, Transcript of long intergenic non-protein coding RNA 1616, humanhuman

BASIC

Gene LINC01616, Length 2,280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01616-201ENST00000561816 APLP2Q06481 763 aa11.52□□□□□ -0.57
LINC01616-201ENST00000561816 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
LINC01616-201ENST00000561816 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
LINC01616-201ENST00000561816 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
LINC01616-201ENST00000561816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01616-201ENST00000561816 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
LINC01616-201ENST00000561816 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01616-201ENST00000561816 CAPN15O75808 1086 aa11.46□□□□□ -0.58
LINC01616-201ENST00000561816 TRIM26Q12899 539 aaPredicted RBP11.46□□□□□ -0.58
LINC01616-201ENST00000561816 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
LINC01616-201ENST00000561816 STK25O00506 426 aa11.43□□□□□ -0.58
LINC01616-201ENST00000561816 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
LINC01616-201ENST00000561816 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
LINC01616-201ENST00000561816 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
LINC01616-201ENST00000561816 HRCP23327 699 aa11.37□□□□□ -0.59
LINC01616-201ENST00000561816 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
LINC01616-201ENST00000561816 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
LINC01616-201ENST00000561816 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
LINC01616-201ENST00000561816 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
LINC01616-201ENST00000561816 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
LINC01616-201ENST00000561816 NUBP1P53384 320 aa11.3□□□□□ -0.6
LINC01616-201ENST00000561816 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
LINC01616-201ENST00000561816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
LINC01616-201ENST00000561816 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
LINC01616-201ENST00000561816 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
LINC01616-201ENST00000561816 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
LINC01616-201ENST00000561816 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.61
LINC01616-201ENST00000561816 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
LINC01616-201ENST00000561816 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
LINC01616-201ENST00000561816 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
LINC01616-201ENST00000561816 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
LINC01616-201ENST00000561816 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
LINC01616-201ENST00000561816 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
LINC01616-201ENST00000561816 ARID3AQ99856 593 aa11.23□□□□□ -0.61
LINC01616-201ENST00000561816 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
LINC01616-201ENST00000561816 SEMA3EO15041 775 aa11.21□□□□□ -0.61
LINC01616-201ENST00000561816 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.62
LINC01616-201ENST00000561816 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
LINC01616-201ENST00000561816 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
LINC01616-201ENST00000561816 GSE1Q14687 1217 aa11.19□□□□□ -0.62
LINC01616-201ENST00000561816 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
LINC01616-201ENST00000561816 PLEKHG5O94827 1062 aa11.16□□□□□ -0.62
LINC01616-201ENST00000561816 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
LINC01616-201ENST00000561816 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
LINC01616-201ENST00000561816 PYGBP11216 843 aa11.11□□□□□ -0.63
LINC01616-201ENST00000561816 WDR70Q9NW82 654 aa11.11□□□□□ -0.63
LINC01616-201ENST00000561816 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
LINC01616-201ENST00000561816 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
LINC01616-201ENST00000561816 ZMYND10O75800 440 aa11.09□□□□□ -0.63
LINC01616-201ENST00000561816 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
LINC01616-201ENST00000561816 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
LINC01616-201ENST00000561816 DSG3P32926 999 aa11.05□□□□□ -0.64
LINC01616-201ENST00000561816 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
LINC01616-201ENST00000561816 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
LINC01616-201ENST00000561816 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
LINC01616-201ENST00000561816 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
LINC01616-201ENST00000561816 PPP1R37O75864 691 aa11.01□□□□□ -0.65
LINC01616-201ENST00000561816 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
LINC01616-201ENST00000561816 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
LINC01616-201ENST00000561816 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
LINC01616-201ENST00000561816 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
LINC01616-201ENST00000561816 RYDENQ9NUL5 291 aaKnown RBP10.98□□□□□ -0.65
LINC01616-201ENST00000561816 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
LINC01616-201ENST00000561816 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.66
LINC01616-201ENST00000561816 E2F4Q16254 413 aa10.95□□□□□ -0.66
LINC01616-201ENST00000561816 KDM4CQ9H3R0 1056 aa10.94□□□□□ -0.66
LINC01616-201ENST00000561816 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
LINC01616-201ENST00000561816 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
LINC01616-201ENST00000561816 APBB1O00213 710 aa10.91□□□□□ -0.66
LINC01616-201ENST00000561816 RBM26Q5T8P6 1007 aaKnown RBP10.91□□□□□ -0.66
LINC01616-201ENST00000561816 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
LINC01616-201ENST00000561816 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
LINC01616-201ENST00000561816 FAM117AQ9C073 453 aa10.86□□□□□ -0.67
LINC01616-201ENST00000561816 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
LINC01616-201ENST00000561816 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
LINC01616-201ENST00000561816 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
LINC01616-201ENST00000561816 ABCC9O60706 1549 aa10.83□□□□□ -0.68
LINC01616-201ENST00000561816 NACADO15069 1562 aa10.83□□□□□ -0.68
LINC01616-201ENST00000561816 AK7Q96M32 723 aa10.82□□□□□ -0.68
LINC01616-201ENST00000561816 PDE4DQ08499 809 aa10.81□□□□□ -0.68
LINC01616-201ENST00000561816 TRIM66O15016 1216 aa10.8□□□□□ -0.68
LINC01616-201ENST00000561816 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
LINC01616-201ENST00000561816 PLEKHG3A1L390 1219 aa10.79□□□□□ -0.68
LINC01616-201ENST00000561816 CLUAP1Q96AJ1 413 aa10.78□□□□□ -0.68
LINC01616-201ENST00000561816 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
LINC01616-201ENST00000561816 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
LINC01616-201ENST00000561816 GPIHBP1Q8IV16 184 aa10.75□□□□□ -0.69
LINC01616-201ENST00000561816 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
LINC01616-201ENST00000561816 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
LINC01616-201ENST00000561816 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
LINC01616-201ENST00000561816 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
LINC01616-201ENST00000561816 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
LINC01616-201ENST00000561816 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
LINC01616-201ENST00000561816 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
LINC01616-201ENST00000561816 CCDC9Q9Y3X0 531 aaKnown RBP10.71□□□□□ -0.69
LINC01616-201ENST00000561816 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
LINC01616-201ENST00000561816 LOC105371045A0A1W2PR82 267 aa10.7□□□□□ -0.7
LINC01616-201ENST00000561816 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
LINC01616-201ENST00000561816 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
LINC01616-201ENST00000561816 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms