RNA–Protein interactions for RNA: ENST00000561603.5

RPAP1-202, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 5 BASIC

Gene RPAP1, Length 3,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-202ENST00000561603 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
RPAP1-202ENST00000561603 NESP48681 1621 aa12.87□□□□□ -0.35
RPAP1-202ENST00000561603 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
RPAP1-202ENST00000561603 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
RPAP1-202ENST00000561603 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
RPAP1-202ENST00000561603 FOXD1Q16676 465 aa12.84□□□□□ -0.35
RPAP1-202ENST00000561603 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
RPAP1-202ENST00000561603 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
RPAP1-202ENST00000561603 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
RPAP1-202ENST00000561603 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
RPAP1-202ENST00000561603 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
RPAP1-202ENST00000561603 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
RPAP1-202ENST00000561603 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
RPAP1-202ENST00000561603 MLECQ14165 292 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
RPAP1-202ENST00000561603 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
RPAP1-202ENST00000561603 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
RPAP1-202ENST00000561603 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 NEFLP07196 543 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 CUX1P39880 1505 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 CFTRP13569 1480 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.37
RPAP1-202ENST00000561603 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
RPAP1-202ENST00000561603 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.38
RPAP1-202ENST00000561603 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
RPAP1-202ENST00000561603 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.382e-8■■■■□ 25.1
RPAP1-202ENST00000561603 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
RPAP1-202ENST00000561603 KIF21BO75037 1637 aa12.7□□□□□ -0.38
RPAP1-202ENST00000561603 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
RPAP1-202ENST00000561603 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
RPAP1-202ENST00000561603 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
RPAP1-202ENST00000561603 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 MIER1Q8N108 512 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 IGF1RP08069 1367 aa12.65□□□□□ -0.38
RPAP1-202ENST00000561603 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.39
RPAP1-202ENST00000561603 ANP32CO43423 234 aa12.64□□□□□ -0.39
RPAP1-202ENST00000561603 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
RPAP1-202ENST00000561603 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
RPAP1-202ENST00000561603 HNRNPMP52272 730 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPAP1-202ENST00000561603 GGT6Q6P531 493 aa12.62□□□□□ -0.39
RPAP1-202ENST00000561603 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
RPAP1-202ENST00000561603 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
RPAP1-202ENST00000561603 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.39
RPAP1-202ENST00000561603 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
RPAP1-202ENST00000561603 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
RPAP1-202ENST00000561603 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
RPAP1-202ENST00000561603 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
RPAP1-202ENST00000561603 ERICH3Q5RHP9 1530 aa12.55□□□□□ -0.4
RPAP1-202ENST00000561603 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
RPAP1-202ENST00000561603 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
RPAP1-202ENST00000561603 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPAP1-202ENST00000561603 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
RPAP1-202ENST00000561603 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
RPAP1-202ENST00000561603 MYT1Q01538 1121 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
RPAP1-202ENST00000561603 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
RPAP1-202ENST00000561603 PKD2Q13563 968 aa12.47□□□□□ -0.41
RPAP1-202ENST00000561603 SOX12O15370 315 aa12.46□□□□□ -0.41
RPAP1-202ENST00000561603 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.41
RPAP1-202ENST00000561603 PPP1R15AO75807 674 aaPredicted RBP12.46□□□□□ -0.42
RPAP1-202ENST00000561603 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
RPAP1-202ENST00000561603 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 STK26Q9P289 416 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 PPM1GO15355 546 aaPredicted RBP12.43□□□□□ -0.42
RPAP1-202ENST00000561603 KIF3BO15066 747 aa12.43□□□□□ -0.42
RPAP1-202ENST00000561603 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
RPAP1-202ENST00000561603 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
RPAP1-202ENST00000561603 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPAP1-202ENST00000561603 A0A0G2JS52 829 aa12.4□□□□□ -0.42
RPAP1-202ENST00000561603 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
RPAP1-202ENST00000561603 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 FKBP8Q14318 412 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
RPAP1-202ENST00000561603 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 PTPRGP23470 1445 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 NUP155O75694 1391 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
RPAP1-202ENST00000561603 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
RPAP1-202ENST00000561603 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
RPAP1-202ENST00000561603 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms