RNA–Protein interactions for RNA: ENST00000561603.5

RPAP1-202, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 5 BASIC

Gene RPAP1, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-202ENST00000561603 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
RPAP1-202ENST00000561603 NESP48681 1621 aa12.87□□□□□ -0.35
RPAP1-202ENST00000561603 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
RPAP1-202ENST00000561603 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
RPAP1-202ENST00000561603 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
RPAP1-202ENST00000561603 FOXD1Q16676 465 aa12.84□□□□□ -0.35
RPAP1-202ENST00000561603 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
RPAP1-202ENST00000561603 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
RPAP1-202ENST00000561603 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
RPAP1-202ENST00000561603 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
RPAP1-202ENST00000561603 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
RPAP1-202ENST00000561603 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
RPAP1-202ENST00000561603 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
RPAP1-202ENST00000561603 MLECQ14165 292 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
RPAP1-202ENST00000561603 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
RPAP1-202ENST00000561603 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
RPAP1-202ENST00000561603 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
RPAP1-202ENST00000561603 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 NEFLP07196 543 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 CUX1P39880 1505 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 CFTRP13569 1480 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
RPAP1-202ENST00000561603 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.37
RPAP1-202ENST00000561603 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
RPAP1-202ENST00000561603 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.38
RPAP1-202ENST00000561603 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
RPAP1-202ENST00000561603 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.382e-8■■■■□ 25.1
RPAP1-202ENST00000561603 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
RPAP1-202ENST00000561603 KIF21BO75037 1637 aa12.7□□□□□ -0.38
RPAP1-202ENST00000561603 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
RPAP1-202ENST00000561603 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
RPAP1-202ENST00000561603 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
RPAP1-202ENST00000561603 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 MIER1Q8N108 512 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
RPAP1-202ENST00000561603 IGF1RP08069 1367 aa12.65□□□□□ -0.38
RPAP1-202ENST00000561603 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.39
RPAP1-202ENST00000561603 ANP32CO43423 234 aa12.64□□□□□ -0.39
RPAP1-202ENST00000561603 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
RPAP1-202ENST00000561603 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
RPAP1-202ENST00000561603 HNRNPMP52272 730 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPAP1-202ENST00000561603 GGT6Q6P531 493 aa12.62□□□□□ -0.39
RPAP1-202ENST00000561603 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
RPAP1-202ENST00000561603 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
RPAP1-202ENST00000561603 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.39
RPAP1-202ENST00000561603 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
RPAP1-202ENST00000561603 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
RPAP1-202ENST00000561603 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
RPAP1-202ENST00000561603 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
RPAP1-202ENST00000561603 ERICH3Q5RHP9 1530 aa12.55□□□□□ -0.4
RPAP1-202ENST00000561603 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
RPAP1-202ENST00000561603 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
RPAP1-202ENST00000561603 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPAP1-202ENST00000561603 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
RPAP1-202ENST00000561603 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
RPAP1-202ENST00000561603 MYT1Q01538 1121 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
RPAP1-202ENST00000561603 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
RPAP1-202ENST00000561603 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
RPAP1-202ENST00000561603 PKD2Q13563 968 aa12.47□□□□□ -0.41
RPAP1-202ENST00000561603 SOX12O15370 315 aa12.46□□□□□ -0.41
RPAP1-202ENST00000561603 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.41
RPAP1-202ENST00000561603 PPP1R15AO75807 674 aaPredicted RBP12.46□□□□□ -0.42
RPAP1-202ENST00000561603 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
RPAP1-202ENST00000561603 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 STK26Q9P289 416 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
RPAP1-202ENST00000561603 PPM1GO15355 546 aaPredicted RBP12.43□□□□□ -0.42
RPAP1-202ENST00000561603 KIF3BO15066 747 aa12.43□□□□□ -0.42
RPAP1-202ENST00000561603 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
RPAP1-202ENST00000561603 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
RPAP1-202ENST00000561603 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
RPAP1-202ENST00000561603 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPAP1-202ENST00000561603 A0A0G2JS52 829 aa12.4□□□□□ -0.42
RPAP1-202ENST00000561603 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
RPAP1-202ENST00000561603 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
RPAP1-202ENST00000561603 FKBP8Q14318 412 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
RPAP1-202ENST00000561603 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 PTPRGP23470 1445 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
RPAP1-202ENST00000561603 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 NUP155O75694 1391 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 LRRC9Q6ZRR7 1453 aa12.36□□□□□ -0.43
RPAP1-202ENST00000561603 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
RPAP1-202ENST00000561603 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
RPAP1-202ENST00000561603 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
RPAP1-202ENST00000561603 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms