RNA–Protein interactions for RNA: ENST00000561246.1

EMC4-212, Transcript of ER membrane protein complex subunit 4, humanhuman

TSL 2

Gene EMC4, Length 2,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC4-212ENST00000561246 SNAPC4Q5SXM2 1469 aa13.35□□□□□ -0.27
EMC4-212ENST00000561246 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
EMC4-212ENST00000561246 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.27
EMC4-212ENST00000561246 APLP2Q06481 763 aa13.32□□□□□ -0.28
EMC4-212ENST00000561246 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
EMC4-212ENST00000561246 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
EMC4-212ENST00000561246 SYNJ2O15056 1496 aa13.28□□□□□ -0.28
EMC4-212ENST00000561246 GRIN2AQ12879 1464 aa13.27□□□□□ -0.28
EMC4-212ENST00000561246 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
EMC4-212ENST00000561246 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
EMC4-212ENST00000561246 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
EMC4-212ENST00000561246 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
EMC4-212ENST00000561246 FBLN2P98095 1184 aa13.23□□□□□ -0.29
EMC4-212ENST00000561246 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
EMC4-212ENST00000561246 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
EMC4-212ENST00000561246 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
EMC4-212ENST00000561246 FMN1Q68DA7 1419 aa13.21□□□□□ -0.3
EMC4-212ENST00000561246 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
EMC4-212ENST00000561246 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
EMC4-212ENST00000561246 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
EMC4-212ENST00000561246 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
EMC4-212ENST00000561246 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
EMC4-212ENST00000561246 NUP160Q12769 1436 aa13.15□□□□□ -0.3
EMC4-212ENST00000561246 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
EMC4-212ENST00000561246 CASKIN1Q8WXD9 1431 aa13.14□□□□□ -0.31
EMC4-212ENST00000561246 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
EMC4-212ENST00000561246 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
EMC4-212ENST00000561246 CHD1O14646 1710 aa13.13□□□□□ -0.31
EMC4-212ENST00000561246 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
EMC4-212ENST00000561246 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
EMC4-212ENST00000561246 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
EMC4-212ENST00000561246 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
EMC4-212ENST00000561246 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
EMC4-212ENST00000561246 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
EMC4-212ENST00000561246 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
EMC4-212ENST00000561246 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
EMC4-212ENST00000561246 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
EMC4-212ENST00000561246 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
EMC4-212ENST00000561246 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
EMC4-212ENST00000561246 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
EMC4-212ENST00000561246 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
EMC4-212ENST00000561246 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
EMC4-212ENST00000561246 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
EMC4-212ENST00000561246 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
EMC4-212ENST00000561246 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
EMC4-212ENST00000561246 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
EMC4-212ENST00000561246 HRCP23327 699 aa12.96□□□□□ -0.34
EMC4-212ENST00000561246 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.34
EMC4-212ENST00000561246 CLASP1Q7Z460 1538 aa12.96□□□□□ -0.34
EMC4-212ENST00000561246 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
EMC4-212ENST00000561246 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
EMC4-212ENST00000561246 NUP153P49790 1475 aaKnown RBP12.94□□□□□ -0.34
EMC4-212ENST00000561246 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
EMC4-212ENST00000561246 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
EMC4-212ENST00000561246 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
EMC4-212ENST00000561246 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
EMC4-212ENST00000561246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
EMC4-212ENST00000561246 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
EMC4-212ENST00000561246 PTPRGP23470 1445 aa12.92□□□□□ -0.34
EMC4-212ENST00000561246 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
EMC4-212ENST00000561246 ABCA8O94911 1581 aa12.91□□□□□ -0.34
EMC4-212ENST00000561246 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
EMC4-212ENST00000561246 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
EMC4-212ENST00000561246 MYOM3Q5VTT5 1437 aa12.87□□□□□ -0.35
EMC4-212ENST00000561246 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
EMC4-212ENST00000561246 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
EMC4-212ENST00000561246 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
EMC4-212ENST00000561246 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
EMC4-212ENST00000561246 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
EMC4-212ENST00000561246 ITGAEP38570 1179 aa12.84□□□□□ -0.35
EMC4-212ENST00000561246 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
EMC4-212ENST00000561246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
EMC4-212ENST00000561246 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
EMC4-212ENST00000561246 TROQ12816 1431 aaPredicted RBP12.83□□□□□ -0.36
EMC4-212ENST00000561246 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
EMC4-212ENST00000561246 ATP10BO94823 1461 aa12.81□□□□□ -0.36
EMC4-212ENST00000561246 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
EMC4-212ENST00000561246 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
EMC4-212ENST00000561246 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
EMC4-212ENST00000561246 KIF14Q15058 1648 aa12.8□□□□□ -0.36
EMC4-212ENST00000561246 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
EMC4-212ENST00000561246 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
EMC4-212ENST00000561246 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
EMC4-212ENST00000561246 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
EMC4-212ENST00000561246 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
EMC4-212ENST00000561246 SETD5Q9C0A6 1442 aa12.72□□□□□ -0.37
EMC4-212ENST00000561246 KDM5BQ9UGL1 1544 aa12.71□□□□□ -0.37
EMC4-212ENST00000561246 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.38
EMC4-212ENST00000561246 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.38
EMC4-212ENST00000561246 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
EMC4-212ENST00000561246 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
EMC4-212ENST00000561246 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
EMC4-212ENST00000561246 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
EMC4-212ENST00000561246 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
EMC4-212ENST00000561246 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
EMC4-212ENST00000561246 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
EMC4-212ENST00000561246 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
EMC4-212ENST00000561246 DAPK1P53355 1430 aa12.65□□□□□ -0.38
EMC4-212ENST00000561246 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
EMC4-212ENST00000561246 PREX2Q70Z35 1606 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms