RNA–Protein interactions for RNA: ENST00000561233.1

LINS1-213, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-213ENST00000561233 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
LINS1-213ENST00000561233 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
LINS1-213ENST00000561233 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
LINS1-213ENST00000561233 GRIN2AQ12879 1464 aa12.17□□□□□ -0.46
LINS1-213ENST00000561233 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
LINS1-213ENST00000561233 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
LINS1-213ENST00000561233 KIF27Q86VH2 1401 aa12.15□□□□□ -0.46
LINS1-213ENST00000561233 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
LINS1-213ENST00000561233 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
LINS1-213ENST00000561233 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
LINS1-213ENST00000561233 NUP160Q12769 1436 aa12.1□□□□□ -0.47
LINS1-213ENST00000561233 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
LINS1-213ENST00000561233 IGF1RP08069 1367 aa12.07□□□□□ -0.48
LINS1-213ENST00000561233 CUL7Q14999 1698 aa12.07□□□□□ -0.48
LINS1-213ENST00000561233 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
LINS1-213ENST00000561233 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
LINS1-213ENST00000561233 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.48
LINS1-213ENST00000561233 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
LINS1-213ENST00000561233 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
LINS1-213ENST00000561233 SHROOM2Q13796 1616 aa12□□□□□ -0.49
LINS1-213ENST00000561233 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
LINS1-213ENST00000561233 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
LINS1-213ENST00000561233 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.49
LINS1-213ENST00000561233 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
LINS1-213ENST00000561233 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
LINS1-213ENST00000561233 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
LINS1-213ENST00000561233 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
LINS1-213ENST00000561233 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
LINS1-213ENST00000561233 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
LINS1-213ENST00000561233 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
LINS1-213ENST00000561233 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
LINS1-213ENST00000561233 EEA1Q15075 1411 aa11.86□□□□□ -0.51
LINS1-213ENST00000561233 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
LINS1-213ENST00000561233 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
LINS1-213ENST00000561233 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
LINS1-213ENST00000561233 TNIKQ9UKE5 1360 aa11.82□□□□□ -0.52
LINS1-213ENST00000561233 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
LINS1-213ENST00000561233 PTPRGP23470 1445 aa11.82□□□□□ -0.52
LINS1-213ENST00000561233 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
LINS1-213ENST00000561233 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
LINS1-213ENST00000561233 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINS1-213ENST00000561233 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
LINS1-213ENST00000561233 GOLGA3Q08378 1498 aa11.77□□□□□ -0.52
LINS1-213ENST00000561233 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
LINS1-213ENST00000561233 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
LINS1-213ENST00000561233 KIF21BO75037 1637 aa11.74□□□□□ -0.53
LINS1-213ENST00000561233 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
LINS1-213ENST00000561233 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
LINS1-213ENST00000561233 ABCC2Q92887 1545 aa11.73□□□□□ -0.53
LINS1-213ENST00000561233 UHRF1BP1LA0JNW5 1464 aa11.71□□□□□ -0.53
LINS1-213ENST00000561233 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
LINS1-213ENST00000561233 ABCC10Q5T3U5 1492 aa11.7□□□□□ -0.54
LINS1-213ENST00000561233 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
LINS1-213ENST00000561233 FAM69CQ0P6D2 419 aa11.69□□□□□ -0.54
LINS1-213ENST00000561233 DIP2BQ9P265 1576 aa11.68□□□□□ -0.54
LINS1-213ENST00000561233 UBTFP17480 764 aaKnown RBP11.68□□□□□ -0.54
LINS1-213ENST00000561233 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
LINS1-213ENST00000561233 SAMD9Q5K651 1589 aa11.67□□□□□ -0.54
LINS1-213ENST00000561233 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
LINS1-213ENST00000561233 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
LINS1-213ENST00000561233 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
LINS1-213ENST00000561233 ABCA8O94911 1581 aa11.65□□□□□ -0.54
LINS1-213ENST00000561233 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
LINS1-213ENST00000561233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINS1-213ENST00000561233 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
LINS1-213ENST00000561233 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
LINS1-213ENST00000561233 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
LINS1-213ENST00000561233 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
LINS1-213ENST00000561233 POTEHQ6S545 545 aa11.59□□□□□ -0.55
LINS1-213ENST00000561233 EPRSP07814 1512 aaKnown RBP11.59□□□□□ -0.55
LINS1-213ENST00000561233 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
LINS1-213ENST00000561233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
LINS1-213ENST00000561233 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
LINS1-213ENST00000561233 GLI2P10070 1586 aa11.58□□□□□ -0.56
LINS1-213ENST00000561233 KCNH8Q96L42 1107 aa11.55□□□□□ -0.56
LINS1-213ENST00000561233 ATP10BO94823 1461 aa11.55□□□□□ -0.56
LINS1-213ENST00000561233 NUP153P49790 1475 aaKnown RBP11.55□□□□□ -0.56
LINS1-213ENST00000561233 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
LINS1-213ENST00000561233 KDM6BO15054 1643 aa11.53□□□□□ -0.56
LINS1-213ENST00000561233 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
LINS1-213ENST00000561233 FMN1Q68DA7 1419 aa11.52□□□□□ -0.56
LINS1-213ENST00000561233 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.57
LINS1-213ENST00000561233 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
LINS1-213ENST00000561233 PPRC1Q5VV67 1664 aaKnown RBP11.51□□□□□ -0.57
LINS1-213ENST00000561233 CD109Q6YHK3 1445 aa11.5□□□□□ -0.57
LINS1-213ENST00000561233 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
LINS1-213ENST00000561233 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
LINS1-213ENST00000561233 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
LINS1-213ENST00000561233 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
LINS1-213ENST00000561233 CLIP1P30622 1438 aa11.47□□□□□ -0.57
LINS1-213ENST00000561233 PLEKHD1A6NEE1 506 aa11.46□□□□□ -0.57
LINS1-213ENST00000561233 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
LINS1-213ENST00000561233 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
LINS1-213ENST00000561233 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
LINS1-213ENST00000561233 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
LINS1-213ENST00000561233 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
LINS1-213ENST00000561233 CEP162Q5TB80 1403 aa11.41□□□□□ -0.58
LINS1-213ENST00000561233 CASKIN1Q8WXD9 1431 aa11.41□□□□□ -0.58
LINS1-213ENST00000561233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.59
LINS1-213ENST00000561233 CCDC18Q5T9S5 1454 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms