RNA–Protein interactions for RNA: ENST00000561223.1

C15orf54-201, Transcript of chromosome 15 open reading frame 54 (putative), humanhuman

TSL 1 (best)

Gene C15orf54, Length 953 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf54-201ENST00000561223 KIF21BO75037 1637 aa8.91□□□□□ -0.98
C15orf54-201ENST00000561223 REM2Q8IYK8 340 aaPredicted RBP8.91□□□□□ -0.98
C15orf54-201ENST00000561223 AKT1S1Q96B36 256 aa8.91□□□□□ -0.98
C15orf54-201ENST00000561223 SOGA1O94964 1423 aa8.9□□□□□ -0.98
C15orf54-201ENST00000561223 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
C15orf54-201ENST00000561223 NESP48681 1621 aa8.87□□□□□ -0.99
C15orf54-201ENST00000561223 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
C15orf54-201ENST00000561223 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
C15orf54-201ENST00000561223 CEP164Q9UPV0 1460 aa8.85□□□□□ -0.99
C15orf54-201ENST00000561223 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
C15orf54-201ENST00000561223 SYNJ1O43426 1573 aa8.85□□□□□ -0.99
C15orf54-201ENST00000561223 NCAPD3P42695 1498 aa8.84□□□□□ -0.99
C15orf54-201ENST00000561223 CENPBP07199 599 aaPredicted RBP8.84□□□□□ -0.99
C15orf54-201ENST00000561223 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
C15orf54-201ENST00000561223 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
C15orf54-201ENST00000561223 NEUROD1Q13562 356 aa8.8□□□□□ -1
C15orf54-201ENST00000561223 PIP4P2Q8N4L2 257 aa8.8□□□□□ -1
C15orf54-201ENST00000561223 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
C15orf54-201ENST00000561223 BIVM-ERCC5R4GMW8 1640 aa8.79□□□□□ -1
C15orf54-201ENST00000561223 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
C15orf54-201ENST00000561223 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
C15orf54-201ENST00000561223 FBLN2P98095 1184 aa8.78□□□□□ -1
C15orf54-201ENST00000561223 CYB5RLQ6IPT4 315 aa8.77□□□□□ -1.01
C15orf54-201ENST00000561223 CLIP1P30622 1438 aa8.77□□□□□ -1.01
C15orf54-201ENST00000561223 VPS8Q8N3P4 1428 aa8.77□□□□□ -1.01
C15orf54-201ENST00000561223 TOP2BQ02880 1626 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
C15orf54-201ENST00000561223 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
C15orf54-201ENST00000561223 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
C15orf54-201ENST00000561223 GTF3C3Q9Y5Q9 886 aa8.74□□□□□ -1.01
C15orf54-201ENST00000561223 ERICH3Q5RHP9 1530 aa8.73□□□□□ -1.01
C15orf54-201ENST00000561223 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
C15orf54-201ENST00000561223 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
C15orf54-201ENST00000561223 LAMC3Q9Y6N6 1575 aa8.7□□□□□ -1.02
C15orf54-201ENST00000561223 ZNF692Q9BU19 519 aaPredicted RBP8.68□□□□□ -1.02
C15orf54-201ENST00000561223 HMGXB3Q12766 1538 aa8.67□□□□□ -1.02
C15orf54-201ENST00000561223 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
C15orf54-201ENST00000561223 EVX2Q03828 476 aa8.66□□□□□ -1.02
C15orf54-201ENST00000561223 MYT1Q01538 1121 aa8.65□□□□□ -1.02
C15orf54-201ENST00000561223 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.03
C15orf54-201ENST00000561223 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.03
C15orf54-201ENST00000561223 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.03
C15orf54-201ENST00000561223 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.03
C15orf54-201ENST00000561223 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
C15orf54-201ENST00000561223 PRXQ9BXM0 1461 aa8.64□□□□□ -1.03
C15orf54-201ENST00000561223 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
C15orf54-201ENST00000561223 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
C15orf54-201ENST00000561223 CUX1P39880 1505 aa8.61□□□□□ -1.03
C15orf54-201ENST00000561223 ILDR1Q86SU0 546 aaPredicted RBP8.61□□□□□ -1.03
C15orf54-201ENST00000561223 MIER1Q8N108 512 aa8.61□□□□□ -1.03
C15orf54-201ENST00000561223 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
C15orf54-201ENST00000561223 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
C15orf54-201ENST00000561223 ARHGEF11O15085 1522 aa8.59□□□□□ -1.03
C15orf54-201ENST00000561223 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
C15orf54-201ENST00000561223 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
C15orf54-201ENST00000561223 SPDYE1Q8NFV5 336 aaPredicted RBP8.58□□□□□ -1.04
C15orf54-201ENST00000561223 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
C15orf54-201ENST00000561223 WDR62O43379 1518 aa8.58□□□□□ -1.04
C15orf54-201ENST00000561223 KIF27Q86VH2 1401 aa8.57□□□□□ -1.04
C15orf54-201ENST00000561223 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
C15orf54-201ENST00000561223 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
C15orf54-201ENST00000561223 CFAP43Q8NDM7 1665 aa8.54□□□□□ -1.04
C15orf54-201ENST00000561223 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
C15orf54-201ENST00000561223 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
C15orf54-201ENST00000561223 CFTRP13569 1480 aa8.53□□□□□ -1.04
C15orf54-201ENST00000561223 ARHGAP35Q9NRY4 1499 aa8.53□□□□□ -1.04
C15orf54-201ENST00000561223 HAX1O00165 279 aa8.53□□□□□ -1.04
C15orf54-201ENST00000561223 TIAM1Q13009 1591 aa8.52□□□□□ -1.04
C15orf54-201ENST00000561223 CCNB3Q8WWL7 1395 aa8.51□□□□□ -1.05
C15orf54-201ENST00000561223 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
C15orf54-201ENST00000561223 FANCD2Q9BXW9 1451 aa8.5□□□□□ -1.05
C15orf54-201ENST00000561223 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
C15orf54-201ENST00000561223 MAPKBP1O60336 1514 aa8.46□□□□□ -1.05
C15orf54-201ENST00000561223 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
C15orf54-201ENST00000561223 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
C15orf54-201ENST00000561223 SPDYE4A6NLX3 237 aa8.44□□□□□ -1.06
C15orf54-201ENST00000561223 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
C15orf54-201ENST00000561223 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
C15orf54-201ENST00000561223 LRRC9Q6ZRR7 1453 aa8.44□□□□□ -1.06
C15orf54-201ENST00000561223 PRR29P0C7W0 189 aa8.43□□□□□ -1.06
C15orf54-201ENST00000561223 FHAD1B1AJZ9 1412 aa8.43□□□□□ -1.06
C15orf54-201ENST00000561223 FGD5Q6ZNL6 1462 aa8.43□□□□□ -1.06
C15orf54-201ENST00000561223 IGF1RP08069 1367 aa8.42□□□□□ -1.06
C15orf54-201ENST00000561223 CUL7Q14999 1698 aa8.42□□□□□ -1.06
C15orf54-201ENST00000561223 EFCAB5A4FU69 1503 aa8.41□□□□□ -1.06
C15orf54-201ENST00000561223 CARMIL1Q5VZK9 1371 aa8.41□□□□□ -1.06
C15orf54-201ENST00000561223 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
C15orf54-201ENST00000561223 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
C15orf54-201ENST00000561223 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
C15orf54-201ENST00000561223 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
C15orf54-201ENST00000561223 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
C15orf54-201ENST00000561223 ZNF608Q9ULD9 1512 aaPredicted RBP8.39□□□□□ -1.07
C15orf54-201ENST00000561223 FYCO1Q9BQS8 1478 aa8.39□□□□□ -1.07
C15orf54-201ENST00000561223 CREBZFQ9NS37 354 aa8.39□□□□□ -1.07
C15orf54-201ENST00000561223 AQRO60306 1485 aaKnown RBP eCLIP8.38□□□□□ -1.07
C15orf54-201ENST00000561223 ITGAEP38570 1179 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms