RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
SNRPA1-213ENST00000560856 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
SNRPA1-213ENST00000560856 KIAA0586Q9BVV6 1533 aa25.78■■□□□ 1.72
SNRPA1-213ENST00000560856 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
SNRPA1-213ENST00000560856 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
SNRPA1-213ENST00000560856 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
SNRPA1-213ENST00000560856 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
SNRPA1-213ENST00000560856 EEA1Q15075 1411 aa25.65■■□□□ 1.7
SNRPA1-213ENST00000560856 IQGAP2Q13576 1575 aa25.58■■□□□ 1.69
SNRPA1-213ENST00000560856 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
SNRPA1-213ENST00000560856 UGGT2Q9NYU1 1516 aa25.49■■□□□ 1.67
SNRPA1-213ENST00000560856 DISP1Q96F81 1524 aa25.47■■□□□ 1.67
SNRPA1-213ENST00000560856 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
SNRPA1-213ENST00000560856 CTTNBP2Q8WZ74 1663 aa25.44■■□□□ 1.66
SNRPA1-213ENST00000560856 TNIKQ9UKE5 1360 aa25.42■■□□□ 1.66
SNRPA1-213ENST00000560856 PTPRGP23470 1445 aa25.4■■□□□ 1.66
SNRPA1-213ENST00000560856 KIF21BO75037 1637 aa25.37■■□□□ 1.65
SNRPA1-213ENST00000560856 KIAA0556O60303 1618 aa25.35■■□□□ 1.65
SNRPA1-213ENST00000560856 ADCY10Q96PN6 1610 aa25.31■■□□□ 1.64
SNRPA1-213ENST00000560856 TTBK1Q5TCY1 1321 aaPredicted RBP25.3■■□□□ 1.64
SNRPA1-213ENST00000560856 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
SNRPA1-213ENST00000560856 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
SNRPA1-213ENST00000560856 UACAQ9BZF9 1416 aa25.23■■□□□ 1.63
SNRPA1-213ENST00000560856 UHRF1BP1LA0JNW5 1464 aa25.22■■□□□ 1.63
SNRPA1-213ENST00000560856 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
SNRPA1-213ENST00000560856 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
SNRPA1-213ENST00000560856 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
SNRPA1-213ENST00000560856 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
SNRPA1-213ENST00000560856 ABCC2Q92887 1545 aa25.17■■□□□ 1.62
SNRPA1-213ENST00000560856 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
SNRPA1-213ENST00000560856 MAPKBP1O60336 1514 aa25.15■■□□□ 1.62
SNRPA1-213ENST00000560856 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
SNRPA1-213ENST00000560856 ABCA8O94911 1581 aa25.11■■□□□ 1.61
SNRPA1-213ENST00000560856 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
SNRPA1-213ENST00000560856 KDM5BQ9UGL1 1544 aa25.11■■□□□ 1.61
SNRPA1-213ENST00000560856 ABCC10Q5T3U5 1492 aa25.07■■□□□ 1.6
SNRPA1-213ENST00000560856 FHOD3Q2V2M9 1422 aa25.05■■□□□ 1.6
SNRPA1-213ENST00000560856 EFCAB5A4FU69 1503 aa25.04■■□□□ 1.6
SNRPA1-213ENST00000560856 KIF13AQ9H1H9 1805 aa25.02■■□□□ 1.6
SNRPA1-213ENST00000560856 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
SNRPA1-213ENST00000560856 FAM69CQ0P6D2 419 aa25■■□□□ 1.59
SNRPA1-213ENST00000560856 DIP2BQ9P265 1576 aa25■■□□□ 1.59
SNRPA1-213ENST00000560856 ZCCHC11Q5TAX3 1644 aaKnown RBP25■■□□□ 1.59
SNRPA1-213ENST00000560856 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
SNRPA1-213ENST00000560856 ATP10BO94823 1461 aa24.93■■□□□ 1.58
SNRPA1-213ENST00000560856 RAPGEF6Q8TEU7 1601 aa24.92■■□□□ 1.58
SNRPA1-213ENST00000560856 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.58
SNRPA1-213ENST00000560856 EPRSP07814 1512 aaKnown RBP24.88■■□□□ 1.57
SNRPA1-213ENST00000560856 ARID3CA6NKF2 412 aa24.88■■□□□ 1.57
SNRPA1-213ENST00000560856 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
SNRPA1-213ENST00000560856 GLI2P10070 1586 aa24.88■■□□□ 1.57
SNRPA1-213ENST00000560856 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
SNRPA1-213ENST00000560856 CLIP1P30622 1438 aa24.78■■□□□ 1.56
SNRPA1-213ENST00000560856 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
SNRPA1-213ENST00000560856 KCNH8Q96L42 1107 aa24.76■■□□□ 1.55
SNRPA1-213ENST00000560856 TSPOAP1O95153 1857 aa24.74■■□□□ 1.55
SNRPA1-213ENST00000560856 MAP3K4Q9Y6R4 1608 aa24.73■■□□□ 1.55
SNRPA1-213ENST00000560856 PPRC1Q5VV67 1664 aaKnown RBP24.72■■□□□ 1.55
SNRPA1-213ENST00000560856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
SNRPA1-213ENST00000560856 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
SNRPA1-213ENST00000560856 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
SNRPA1-213ENST00000560856 CEP162Q5TB80 1403 aa24.68■■□□□ 1.54
SNRPA1-213ENST00000560856 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
SNRPA1-213ENST00000560856 HECW1Q76N89 1606 aa24.67■■□□□ 1.54
SNRPA1-213ENST00000560856 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
SNRPA1-213ENST00000560856 CD109Q6YHK3 1445 aa24.66■■□□□ 1.54
SNRPA1-213ENST00000560856 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
SNRPA1-213ENST00000560856 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
SNRPA1-213ENST00000560856 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
SNRPA1-213ENST00000560856 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
SNRPA1-213ENST00000560856 ABCA9Q8IUA7 1624 aa24.61■■□□□ 1.53
SNRPA1-213ENST00000560856 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
SNRPA1-213ENST00000560856 LRRIQ1Q96JM4 1722 aa24.59■■□□□ 1.53
SNRPA1-213ENST00000560856 COL17A1Q9UMD9 1497 aaPredicted RBP24.58■■□□□ 1.52
SNRPA1-213ENST00000560856 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
SNRPA1-213ENST00000560856 KDM6BO15054 1643 aa24.56■■□□□ 1.52
SNRPA1-213ENST00000560856 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
SNRPA1-213ENST00000560856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.52■■□□□ 1.52
SNRPA1-213ENST00000560856 TROQ12816 1431 aaPredicted RBP24.51■■□□□ 1.51
SNRPA1-213ENST00000560856 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
SNRPA1-213ENST00000560856 TTC37Q6PGP7 1564 aa24.46■■□□□ 1.51
SNRPA1-213ENST00000560856 KIF14Q15058 1648 aa24.43■■□□□ 1.5
SNRPA1-213ENST00000560856 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
SNRPA1-213ENST00000560856 ARAP3Q8WWN8 1544 aa24.42■■□□□ 1.5
SNRPA1-213ENST00000560856 NEO1Q92859 1461 aa24.42■■□□□ 1.5
SNRPA1-213ENST00000560856 PLCH2O75038 1416 aa24.39■■□□□ 1.5
SNRPA1-213ENST00000560856 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
SNRPA1-213ENST00000560856 FANCAO15360 1455 aa24.35■■□□□ 1.49
SNRPA1-213ENST00000560856 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
SNRPA1-213ENST00000560856 RAPGEF3O95398 923 aa24.3■■□□□ 1.48
SNRPA1-213ENST00000560856 MYO5CQ9NQX4 1742 aa24.28■■□□□ 1.48
SNRPA1-213ENST00000560856 EFCAB2Q5VUJ9 269 aa24.28■■□□□ 1.48
SNRPA1-213ENST00000560856 CFAP74Q9C0B2 1584 aa24.27■■□□□ 1.48
SNRPA1-213ENST00000560856 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
SNRPA1-213ENST00000560856 FRMPD1Q5SYB0 1578 aa24.25■■□□□ 1.47
SNRPA1-213ENST00000560856 DENND4BO75064 1496 aaPredicted RBP24.25■■□□□ 1.47
SNRPA1-213ENST00000560856 CDC42BPBQ9Y5S2 1711 aa24.23■■□□□ 1.47
SNRPA1-213ENST00000560856 TIAM1Q13009 1591 aa24.22■■□□□ 1.47
SNRPA1-213ENST00000560856 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
SNRPA1-213ENST00000560856 EHBP1L1Q8N3D4 1523 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms