RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
IDH3A-220ENST00000560667 CUL7Q14999 1698 aa11.77□□□□□ -0.53
IDH3A-220ENST00000560667 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
IDH3A-220ENST00000560667 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
IDH3A-220ENST00000560667 ADAMTS12P58397 1594 aa11.74□□□□□ -0.53
IDH3A-220ENST00000560667 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
IDH3A-220ENST00000560667 GRIN2AQ12879 1464 aa11.71□□□□□ -0.54
IDH3A-220ENST00000560667 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
IDH3A-220ENST00000560667 MAGI1Q96QZ7 1491 aaPredicted RBP11.69□□□□□ -0.54
IDH3A-220ENST00000560667 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
IDH3A-220ENST00000560667 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
IDH3A-220ENST00000560667 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
IDH3A-220ENST00000560667 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
IDH3A-220ENST00000560667 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
IDH3A-220ENST00000560667 ARHGEF11O15085 1522 aa11.68□□□□□ -0.54
IDH3A-220ENST00000560667 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
IDH3A-220ENST00000560667 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
IDH3A-220ENST00000560667 CYB5RLQ6IPT4 315 aa11.66□□□□□ -0.54
IDH3A-220ENST00000560667 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
IDH3A-220ENST00000560667 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
IDH3A-220ENST00000560667 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.54
IDH3A-220ENST00000560667 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
IDH3A-220ENST00000560667 KIAA0586Q9BVV6 1533 aa11.63□□□□□ -0.55
IDH3A-220ENST00000560667 NUP160Q12769 1436 aa11.61□□□□□ -0.55
IDH3A-220ENST00000560667 IQGAP2Q13576 1575 aa11.6□□□□□ -0.55
IDH3A-220ENST00000560667 CHD1O14646 1710 aa11.6□□□□□ -0.55
IDH3A-220ENST00000560667 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
IDH3A-220ENST00000560667 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
IDH3A-220ENST00000560667 APLP2Q06481 763 aa11.57□□□□□ -0.56
IDH3A-220ENST00000560667 SAMD9Q5K651 1589 aa11.57□□□□□ -0.56
IDH3A-220ENST00000560667 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
IDH3A-220ENST00000560667 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
IDH3A-220ENST00000560667 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
IDH3A-220ENST00000560667 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
IDH3A-220ENST00000560667 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
IDH3A-220ENST00000560667 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
IDH3A-220ENST00000560667 KIAA0556O60303 1618 aa11.5□□□□□ -0.57
IDH3A-220ENST00000560667 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
IDH3A-220ENST00000560667 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
IDH3A-220ENST00000560667 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
IDH3A-220ENST00000560667 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
IDH3A-220ENST00000560667 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
IDH3A-220ENST00000560667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
IDH3A-220ENST00000560667 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
IDH3A-220ENST00000560667 CARMIL2Q6F5E8 1435 aa11.45□□□□□ -0.58
IDH3A-220ENST00000560667 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
IDH3A-220ENST00000560667 CDK13Q14004 1512 aaKnown RBP11.44□□□□□ -0.58
IDH3A-220ENST00000560667 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
IDH3A-220ENST00000560667 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
IDH3A-220ENST00000560667 PTPRGP23470 1445 aa11.44□□□□□ -0.58
IDH3A-220ENST00000560667 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
IDH3A-220ENST00000560667 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
IDH3A-220ENST00000560667 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
IDH3A-220ENST00000560667 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
IDH3A-220ENST00000560667 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
IDH3A-220ENST00000560667 ITGAEP38570 1179 aa11.41□□□□□ -0.58
IDH3A-220ENST00000560667 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
IDH3A-220ENST00000560667 MAP3K1Q13233 1512 aa11.38□□□□□ -0.59
IDH3A-220ENST00000560667 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
IDH3A-220ENST00000560667 ATP10BO94823 1461 aa11.37□□□□□ -0.59
IDH3A-220ENST00000560667 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
IDH3A-220ENST00000560667 ABCA8O94911 1581 aa11.35□□□□□ -0.59
IDH3A-220ENST00000560667 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
IDH3A-220ENST00000560667 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
IDH3A-220ENST00000560667 UACAQ9BZF9 1416 aa11.34□□□□□ -0.59
IDH3A-220ENST00000560667 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
IDH3A-220ENST00000560667 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
IDH3A-220ENST00000560667 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
IDH3A-220ENST00000560667 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
IDH3A-220ENST00000560667 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
IDH3A-220ENST00000560667 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
IDH3A-220ENST00000560667 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
IDH3A-220ENST00000560667 CDK11AQ9UQ88 783 aaPredicted RBP11.29□□□□□ -0.6
IDH3A-220ENST00000560667 ZNF777Q9ULD5 760 aaPredicted RBP11.27□□□□□ -0.61
IDH3A-220ENST00000560667 AEBP2Q6ZN18 517 aaPredicted RBP11.26□□□□□ -0.61
IDH3A-220ENST00000560667 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
IDH3A-220ENST00000560667 KIF14Q15058 1648 aa11.26□□□□□ -0.61
IDH3A-220ENST00000560667 PTPRKQ15262 1439 aa11.25□□□□□ -0.61
IDH3A-220ENST00000560667 FGD6Q6ZV73 1430 aa11.25□□□□□ -0.61
IDH3A-220ENST00000560667 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
IDH3A-220ENST00000560667 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
IDH3A-220ENST00000560667 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
IDH3A-220ENST00000560667 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
IDH3A-220ENST00000560667 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
IDH3A-220ENST00000560667 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
IDH3A-220ENST00000560667 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
IDH3A-220ENST00000560667 KDM5BQ9UGL1 1544 aa11.21□□□□□ -0.61
IDH3A-220ENST00000560667 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
IDH3A-220ENST00000560667 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
IDH3A-220ENST00000560667 HRCP23327 699 aa11.2□□□□□ -0.62
IDH3A-220ENST00000560667 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
IDH3A-220ENST00000560667 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
IDH3A-220ENST00000560667 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
IDH3A-220ENST00000560667 HNRNPMP52272 730 aaKnown RBP eCLIP11.19□□□□□ -0.62
IDH3A-220ENST00000560667 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
IDH3A-220ENST00000560667 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
IDH3A-220ENST00000560667 PTPN23Q9H3S7 1636 aa11.17□□□□□ -0.62
IDH3A-220ENST00000560667 ASXL2Q76L83 1435 aa11.16□□□□□ -0.62
IDH3A-220ENST00000560667 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
IDH3A-220ENST00000560667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms