RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
TPM1-224ENST00000560615 NPM1P06748 294 aaKnown RBP eCLIP32.1■■■□□ 2.73
TPM1-224ENST00000560615 KIAA0586Q9BVV6 1533 aa32.07■■■□□ 2.72
TPM1-224ENST00000560615 CUL7Q14999 1698 aa32.07■■■□□ 2.72
TPM1-224ENST00000560615 CARMIL1Q5VZK9 1371 aa31.99■■■□□ 2.71
TPM1-224ENST00000560615 AEBP2Q6ZN18 517 aaPredicted RBP31.91■■■□□ 2.7
TPM1-224ENST00000560615 FAM69CQ0P6D2 419 aa31.86■■■□□ 2.69
TPM1-224ENST00000560615 CARMIL2Q6F5E8 1435 aa31.85■■■□□ 2.69
TPM1-224ENST00000560615 PTPRGP23470 1445 aa31.82■■■□□ 2.68
TPM1-224ENST00000560615 MAPKBP1O60336 1514 aa31.81■■■□□ 2.68
TPM1-224ENST00000560615 ABCC10Q5T3U5 1492 aa31.81■■■□□ 2.68
TPM1-224ENST00000560615 TNIKQ9UKE5 1360 aa31.76■■■□□ 2.67
TPM1-224ENST00000560615 ADCY10Q96PN6 1610 aa31.75■■■□□ 2.67
TPM1-224ENST00000560615 TTBK1Q5TCY1 1321 aaPredicted RBP31.74■■■□□ 2.67
TPM1-224ENST00000560615 KIF13AQ9H1H9 1805 aa31.73■■■□□ 2.67
TPM1-224ENST00000560615 IQGAP2Q13576 1575 aa31.71■■■□□ 2.67
TPM1-224ENST00000560615 RAPGEF2Q9Y4G8 1499 aa31.7■■■□□ 2.66
TPM1-224ENST00000560615 DIP2BQ9P265 1576 aa31.64■■■□□ 2.65
TPM1-224ENST00000560615 ABCC2Q92887 1545 aa31.58■■■□□ 2.65
TPM1-224ENST00000560615 UACAQ9BZF9 1416 aa31.55■■■□□ 2.64
TPM1-224ENST00000560615 UHRF1BP1LA0JNW5 1464 aa31.53■■■□□ 2.64
TPM1-224ENST00000560615 DISP1Q96F81 1524 aa31.52■■■□□ 2.64
TPM1-224ENST00000560615 PLB1Q6P1J6 1458 aa31.52■■■□□ 2.64
TPM1-224ENST00000560615 UGGT2Q9NYU1 1516 aa31.51■■■□□ 2.63
TPM1-224ENST00000560615 ASXL2Q76L83 1435 aa31.47■■■□□ 2.63
TPM1-224ENST00000560615 KDM6BO15054 1643 aa31.42■■■□□ 2.62
TPM1-224ENST00000560615 KIAA0556O60303 1618 aa31.39■■■□□ 2.62
TPM1-224ENST00000560615 FAM9AQ8IZU1 332 aaPredicted RBP31.39■■■□□ 2.62
TPM1-224ENST00000560615 GOLGA3Q08378 1498 aa31.39■■■□□ 2.62
TPM1-224ENST00000560615 KDM5BQ9UGL1 1544 aa31.37■■■□□ 2.61
TPM1-224ENST00000560615 GLI2P10070 1586 aa31.35■■■□□ 2.61
TPM1-224ENST00000560615 TSPOAP1O95153 1857 aa31.33■■■□□ 2.61
TPM1-224ENST00000560615 PRXQ9BXM0 1461 aa31.32■■■□□ 2.6
TPM1-224ENST00000560615 CTTNBP2Q8WZ74 1663 aa31.29■■■□□ 2.6
TPM1-224ENST00000560615 EPRSP07814 1512 aaKnown RBP31.26■■■□□ 2.59
TPM1-224ENST00000560615 TEX14Q8IWB6 1497 aa31.21■■■□□ 2.59
TPM1-224ENST00000560615 ZCCHC11Q5TAX3 1644 aaKnown RBP31.21■■■□□ 2.59
TPM1-224ENST00000560615 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
TPM1-224ENST00000560615 WDR7Q9Y4E6 1490 aa31.17■■■□□ 2.58
TPM1-224ENST00000560615 MAP3K4Q9Y6R4 1608 aa31.11■■■□□ 2.57
TPM1-224ENST00000560615 PPRC1Q5VV67 1664 aaKnown RBP31.1■■■□□ 2.57
TPM1-224ENST00000560615 ABCA8O94911 1581 aa31.1■■■□□ 2.57
TPM1-224ENST00000560615 KDM4FA0A1W2PPD8 638 aa31.09■■■□□ 2.57
TPM1-224ENST00000560615 EEA1Q15075 1411 aa31.08■■■□□ 2.57
TPM1-224ENST00000560615 KCNH8Q96L42 1107 aa31.08■■■□□ 2.57
TPM1-224ENST00000560615 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
TPM1-224ENST00000560615 CD109Q6YHK3 1445 aa31.03■■■□□ 2.56
TPM1-224ENST00000560615 COL17A1Q9UMD9 1497 aaPredicted RBP30.97■■■□□ 2.55
TPM1-224ENST00000560615 MAGI3Q5TCQ9 1506 aa30.97■■■□□ 2.55
TPM1-224ENST00000560615 ARID3CA6NKF2 412 aa30.92■■■□□ 2.54
TPM1-224ENST00000560615 CFAP43Q8NDM7 1665 aa30.92■■■□□ 2.54
TPM1-224ENST00000560615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.9■■■□□ 2.54
TPM1-224ENST00000560615 HNRNPUL2Q1KMD3 747 aaKnown RBP30.9■■■□□ 2.54
TPM1-224ENST00000560615 ATP10BO94823 1461 aa30.89■■■□□ 2.54
TPM1-224ENST00000560615 SAMD9Q5K651 1589 aa30.87■■■□□ 2.53
TPM1-224ENST00000560615 ADGRL1O94910 1474 aa30.85■■■□□ 2.53
TPM1-224ENST00000560615 RANGAP1P46060 587 aaPredicted RBP30.85■■■□□ 2.53
TPM1-224ENST00000560615 PHLDB1Q86UU1 1377 aa30.8■■■□□ 2.52
TPM1-224ENST00000560615 RAPGEF6Q8TEU7 1601 aa30.79■■■□□ 2.52
TPM1-224ENST00000560615 PLEKHD1A6NEE1 506 aa30.72■■■□□ 2.51
TPM1-224ENST00000560615 ARAP3Q8WWN8 1544 aa30.72■■■□□ 2.51
TPM1-224ENST00000560615 FHOD3Q2V2M9 1422 aa30.72■■■□□ 2.51
TPM1-224ENST00000560615 KIF21BO75037 1637 aa30.69■■■□□ 2.5
TPM1-224ENST00000560615 ABCA9Q8IUA7 1624 aa30.69■■■□□ 2.5
TPM1-224ENST00000560615 EFCAB5A4FU69 1503 aa30.68■■■□□ 2.5
TPM1-224ENST00000560615 NUP153P49790 1475 aaKnown RBP30.67■■■□□ 2.5
TPM1-224ENST00000560615 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
TPM1-224ENST00000560615 NEO1Q92859 1461 aa30.63■■■□□ 2.49
TPM1-224ENST00000560615 CHIC1Q5VXU3 224 aa30.56■■■□□ 2.48
TPM1-224ENST00000560615 RAPGEF3O95398 923 aa30.55■■■□□ 2.48
TPM1-224ENST00000560615 EHMT2Q96KQ7 1210 aa30.51■■■□□ 2.47
TPM1-224ENST00000560615 FMN1Q68DA7 1419 aa30.48■■■□□ 2.47
TPM1-224ENST00000560615 ATP1B4Q9UN42 357 aaPredicted RBP30.48■■■□□ 2.47
TPM1-224ENST00000560615 CDK11AQ9UQ88 783 aaPredicted RBP30.46■■■□□ 2.47
TPM1-224ENST00000560615 DENND4BO75064 1496 aaPredicted RBP30.44■■■□□ 2.46
TPM1-224ENST00000560615 ARID4BQ4LE39 1312 aaPredicted RBP30.43■■■□□ 2.46
TPM1-224ENST00000560615 AKNAQ7Z591 1439 aa30.42■■■□□ 2.46
TPM1-224ENST00000560615 FANCAO15360 1455 aa30.42■■■□□ 2.46
TPM1-224ENST00000560615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.39■■■□□ 2.46
TPM1-224ENST00000560615 CFAP74Q9C0B2 1584 aa30.39■■■□□ 2.46
TPM1-224ENST00000560615 HECW2Q9P2P5 1572 aa30.37■■■□□ 2.45
TPM1-224ENST00000560615 CDK13Q14004 1512 aaKnown RBP30.35■■■□□ 2.45
TPM1-224ENST00000560615 ARHGAP35Q9NRY4 1499 aa30.34■■■□□ 2.45
TPM1-224ENST00000560615 HECW1Q76N89 1606 aa30.33■■■□□ 2.45
TPM1-224ENST00000560615 FRMPD1Q5SYB0 1578 aa30.31■■■□□ 2.44
TPM1-224ENST00000560615 PLCH2O75038 1416 aa30.3■■■□□ 2.44
TPM1-224ENST00000560615 TTC37Q6PGP7 1564 aa30.28■■■□□ 2.44
TPM1-224ENST00000560615 EFCAB2Q5VUJ9 269 aa30.27■■■□□ 2.44
TPM1-224ENST00000560615 PTPRMP28827 1452 aa30.26■■■□□ 2.44
TPM1-224ENST00000560615 POGZQ7Z3K3 1410 aa30.25■■■□□ 2.43
TPM1-224ENST00000560615 ADAMTSL3P82987 1691 aa30.24■■■□□ 2.43
TPM1-224ENST00000560615 CLIP1P30622 1438 aa30.24■■■□□ 2.43
TPM1-224ENST00000560615 MAGI2Q86UL8 1455 aa30.24■■■□□ 2.43
TPM1-224ENST00000560615 ARHGEF40Q8TER5 1519 aa30.23■■■□□ 2.43
TPM1-224ENST00000560615 SCAPERQ9BY12 1400 aa30.22■■■□□ 2.43
TPM1-224ENST00000560615 RICTORQ6R327 1708 aa30.21■■■□□ 2.43
TPM1-224ENST00000560615 ZMYM4Q5VZL5 1548 aa30.19■■■□□ 2.42
TPM1-224ENST00000560615 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
TPM1-224ENST00000560615 BCORL1Q5H9F3 1711 aa30.19■■■□□ 2.42
TPM1-224ENST00000560615 ZFYVE16Q7Z3T8 1539 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms